BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018875
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...    91   1e-16
ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...    90   2e-16
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h...    87   2e-15
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...    86   2e-15
emb|CBI20740.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/61 (75%), Positives = 52/61 (85%)
 Frame = -1

Query: 252 SYQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAHTVHLVN 73
           SYQ KV+EVA +RNTIAVL+TGAGKTMIAVMLI+E+G  +K    KKLIIFLA TVHLVN
Sbjct: 64  SYQVKVFEVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLVN 123

Query: 72  Q 70
           Q
Sbjct: 124 Q 124


>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = -1

Query: 249 YQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAHTVHLVNQ 70
           YQ +VYEVARRRNTIAVLDTG+GKT+IAVML++EVG  +K    KKLIIFLA TVHLVNQ
Sbjct: 69  YQIEVYEVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTSGVKKLIIFLAPTVHLVNQ 128


>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
          Length = 1655

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -1

Query: 249 YQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAHTVHLVNQ 70
           YQ +VYEVA+RRN IA+LDTG GKTMIAVMLI++ G  ++  + KKLIIFLA TVHLVNQ
Sbjct: 48  YQLQVYEVAKRRNIIALLDTGVGKTMIAVMLIKDFGQAIESTESKKLIIFLAPTVHLVNQ 107

Query: 69  V 67
           V
Sbjct: 108 V 108


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/61 (72%), Positives = 50/61 (81%)
 Frame = -1

Query: 252 SYQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAHTVHLVN 73
           SYQ KV+EVA+RRNTIAVLDTG GKTMIA+MLI+E+G  +K    K  IIFLA TVHLVN
Sbjct: 48  SYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVN 107

Query: 72  Q 70
           Q
Sbjct: 108 Q 108


>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/61 (72%), Positives = 50/61 (81%)
 Frame = -1

Query: 252 SYQKKVYEVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAHTVHLVN 73
           SYQ KV+EVA+RRNTIAVLDTG GKTMIA+MLI+E+G  +K    K  IIFLA TVHLVN
Sbjct: 48  SYQWKVFEVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVN 107

Query: 72  Q 70
           Q
Sbjct: 108 Q 108