BLASTX nr result

ID: Coptis21_contig00018861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018861
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18467.3| unnamed protein product [Vitis vinifera]              146   1e-33
ref|XP_002263707.1| PREDICTED: GATA transcription factor 28-like...   146   1e-33
ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like...   145   4e-33
ref|XP_004141747.1| PREDICTED: GATA transcription factor 24-like...   145   4e-33
ref|XP_003531759.1| PREDICTED: GATA transcription factor 28-like...   141   6e-32

>emb|CBI18467.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  146 bits (369), Expect = 1e-33
 Identities = 88/173 (50%), Positives = 103/173 (59%), Gaps = 21/173 (12%)
 Frame = +1

Query: 37  NLSDQQG------GPASTENQLTLSFHGEVYVFDSVTPEKVQAVLLLLGVCEVPVPEPVS 198
           NL+D +G      G +  +NQLTLSF G+VYVFDSV+PEKVQAVLLLLG  EVP   P  
Sbjct: 11  NLADSRGALTVQPGGSDNQNQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPPTMPAL 70

Query: 199 KLPAEK--------------RLESLMRFRQKRKERNFEKRIIQPARKVVAQRMKRQKGQF 336
            +                  RL SL+RFR+KRKERNF+K+I    RK VA RM+R KGQF
Sbjct: 71  SIAGHNRELPGTPQRYNVPHRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQF 130

Query: 337 ASSKPTYAGFTSILSCDSSNWSSDVN-ESQQESTCCQCGLSEKSTPMMRRGPE 492
            SSK  +    S      S+W    N    QE  C  CG+SEKSTPMMRRGPE
Sbjct: 131 TSSKSNHDDSASTTPGWESSWGMAGNGPINQEIVCRHCGISEKSTPMMRRGPE 183


>ref|XP_002263707.1| PREDICTED: GATA transcription factor 28-like [Vitis vinifera]
          Length = 299

 Score =  146 bits (369), Expect = 1e-33
 Identities = 88/173 (50%), Positives = 103/173 (59%), Gaps = 21/173 (12%)
 Frame = +1

Query: 37  NLSDQQG------GPASTENQLTLSFHGEVYVFDSVTPEKVQAVLLLLGVCEVPVPEPVS 198
           NL+D +G      G +  +NQLTLSF G+VYVFDSV+PEKVQAVLLLLG  EVP   P  
Sbjct: 66  NLADSRGALTVQPGGSDNQNQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREVPPTMPAL 125

Query: 199 KLPAEK--------------RLESLMRFRQKRKERNFEKRIIQPARKVVAQRMKRQKGQF 336
            +                  RL SL+RFR+KRKERNF+K+I    RK VA RM+R KGQF
Sbjct: 126 SIAGHNRELPGTPQRYNVPHRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQF 185

Query: 337 ASSKPTYAGFTSILSCDSSNWSSDVN-ESQQESTCCQCGLSEKSTPMMRRGPE 492
            SSK  +    S      S+W    N    QE  C  CG+SEKSTPMMRRGPE
Sbjct: 186 TSSKSNHDDSASTTPGWESSWGMAGNGPINQEIVCRHCGISEKSTPMMRRGPE 238


>ref|XP_004159006.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
          Length = 303

 Score =  145 bits (365), Expect = 4e-33
 Identities = 86/167 (51%), Positives = 109/167 (65%), Gaps = 28/167 (16%)
 Frame = +1

Query: 76  NQLTLSFHGEVYVFDSVTPEKVQAVLLLLGVCEVP--VPE-PVSKLPAEK---------- 216
           +QLTLS+ G+VYVFDSV+PEKVQAVLLLLG  EVP  VP  P++  P ++          
Sbjct: 83  DQLTLSYQGQVYVFDSVSPEKVQAVLLLLGGREVPLRVPSIPITNQPNDRHLTDEAFNQA 142

Query: 217 ------------RLESLMRFRQKRKERNFEKRIIQPARKVVAQRMKRQKGQFASSKPTYA 360
                       RL SL+RFR+KRKERNF+K+I    RK VA RM+R KGQF SSKP + 
Sbjct: 143 LANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPIHE 202

Query: 361 GFTSILSC--DSSNWSSDVNESQQESTCCQ-CGLSEKSTPMMRRGPE 492
             +  ++    + +WSSD N SQQ+   C+ CG+SEKSTPMMRRGP+
Sbjct: 203 DSSLAMASWEQNESWSSDGNGSQQQEILCRHCGISEKSTPMMRRGPD 249


>ref|XP_004141747.1| PREDICTED: GATA transcription factor 24-like [Cucumis sativus]
          Length = 299

 Score =  145 bits (365), Expect = 4e-33
 Identities = 86/167 (51%), Positives = 109/167 (65%), Gaps = 28/167 (16%)
 Frame = +1

Query: 76  NQLTLSFHGEVYVFDSVTPEKVQAVLLLLGVCEVP--VPE-PVSKLPAEK---------- 216
           +QLTLS+ G+VYVFDSV+PEKVQAVLLLLG  EVP  VP  P++  P ++          
Sbjct: 83  DQLTLSYQGQVYVFDSVSPEKVQAVLLLLGGREVPLRVPSIPITNQPNDRHLTDEAFNQA 142

Query: 217 ------------RLESLMRFRQKRKERNFEKRIIQPARKVVAQRMKRQKGQFASSKPTYA 360
                       RL SL+RFR+KRKERNF+K+I    RK VA RM+R KGQF SSKP + 
Sbjct: 143 LANIPPRLSVPQRLASLIRFREKRKERNFDKKIRYTVRKEVALRMQRNKGQFTSSKPIHE 202

Query: 361 GFTSILSC--DSSNWSSDVNESQQESTCCQ-CGLSEKSTPMMRRGPE 492
             +  ++    + +WSSD N SQQ+   C+ CG+SEKSTPMMRRGP+
Sbjct: 203 DSSLAMASWEQNESWSSDGNGSQQQEILCRHCGISEKSTPMMRRGPD 249


>ref|XP_003531759.1| PREDICTED: GATA transcription factor 28-like [Glycine max]
          Length = 300

 Score =  141 bits (355), Expect = 6e-32
 Identities = 85/170 (50%), Positives = 102/170 (60%), Gaps = 23/170 (13%)
 Frame = +1

Query: 52  QGGPASTENQLTLSFHGEVYVFDSVTPEKVQAVLLLLGVCEVPVPEPV------------ 195
           QGG +   +QLTLSF G+VYVFDSV+PEKVQAVLLLLG  E+P   P             
Sbjct: 81  QGGDSG--DQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGREIPPTMPAMPVSPNHNNRGY 138

Query: 196 ----SKLPAEKRLESLMRFRQKRKERNFEKRIIQPARKVVAQRMKRQKGQFASSKPTYAG 363
                K    +RL SL+RFR+KRKERN++K+I    RK VA RM+R KGQF SSK     
Sbjct: 139 TGTPQKFSVPQRLASLIRFREKRKERNYDKKIRYTVRKEVALRMQRNKGQFTSSKSNNDE 198

Query: 364 FTSILSCDSSNWSSDVN-------ESQQESTCCQCGLSEKSTPMMRRGPE 492
             S    +++NW  D N         QQ+  C  CG+SEKSTPMMRRGPE
Sbjct: 199 SAS----NATNWGMDENWTADNSGSQQQDIVCRHCGISEKSTPMMRRGPE 244


Top