BLASTX nr result

ID: Coptis21_contig00018858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018858
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   157   7e-37
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   157   7e-37
ref|XP_003633548.1| PREDICTED: putative disease resistance prote...   147   9e-34
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   144   6e-33
emb|CBI28588.3| unnamed protein product [Vitis vinifera]              141   5e-32

>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 961

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/140 (55%), Positives = 98/140 (70%)
 Frame = -1

Query: 422 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVKRITKSIIESATHNVIDLMDLD 243
           GM G+GKTTL QLVYND  +++HF+L+MWV V++DFDV+R TKS+++SAT    DLMDLD
Sbjct: 94  GMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSATGKNFDLMDLD 153

Query: 242 PLQVTXXXXXXXXXXXXXLDDVWNESYNDWNILQAPLRVGAPGSKILITTRSQIVSKIMM 63
            LQ               LDDVW E  +DW+ L+ PLR GA GSKI++TTRS  VS +M 
Sbjct: 154 ILQSKLRDILKGKRYLLVLDDVWTEKKSDWDRLRLPLRAGATGSKIIVTTRSGRVSSVMG 213

Query: 62  TSHVISLQGLADDDCWSLFK 3
           T     L+GL+DDDCWSLFK
Sbjct: 214 TMPPRHLEGLSDDDCWSLFK 233


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score =  157 bits (398), Expect = 7e-37
 Identities = 78/140 (55%), Positives = 98/140 (70%)
 Frame = -1

Query: 422 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVKRITKSIIESATHNVIDLMDLD 243
           GM G+GKTTL QLVYND  +++HF+L+MWV V++DFDV+R TKS+++SAT    DLMDLD
Sbjct: 187 GMGGLGKTTLAQLVYNDEKVTKHFELKMWVCVSDDFDVRRATKSVLDSATGKNFDLMDLD 246

Query: 242 PLQVTXXXXXXXXXXXXXLDDVWNESYNDWNILQAPLRVGAPGSKILITTRSQIVSKIMM 63
            LQ               LDDVW E  +DW+ L+ PLR GA GSKI++TTRS  VS +M 
Sbjct: 247 ILQSKLRDILKGKRYLLVLDDVWTEKKSDWDRLRLPLRAGATGSKIIVTTRSGRVSSVMG 306

Query: 62  TSHVISLQGLADDDCWSLFK 3
           T     L+GL+DDDCWSLFK
Sbjct: 307 TMPPRHLEGLSDDDCWSLFK 326


>ref|XP_003633548.1| PREDICTED: putative disease resistance protein At3g14460-like
           [Vitis vinifera]
          Length = 1390

 Score =  147 bits (371), Expect = 9e-34
 Identities = 70/140 (50%), Positives = 94/140 (67%)
 Frame = -1

Query: 422 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVKRITKSIIESATHNVIDLMDLD 243
           GM G+GKTTL Q+VYND  + +HFQL+ W  V+++F+VKRITK+++ESAT     L +L+
Sbjct: 218 GMGGLGKTTLAQIVYNDERVKKHFQLKAWACVSDEFEVKRITKALVESATKRTCGLNNLE 277

Query: 242 PLQVTXXXXXXXXXXXXXLDDVWNESYNDWNILQAPLRVGAPGSKILITTRSQIVSKIMM 63
            LQ               LDDVWNE Y DW+ L+ PL VG+PGSKI++TTRS+ V+ IM 
Sbjct: 278 LLQSELRKMLNRRKFLLVLDDVWNEDYGDWDKLRIPLAVGSPGSKIIVTTRSERVASIMR 337

Query: 62  TSHVISLQGLADDDCWSLFK 3
                 L+GL+ DDCWSL +
Sbjct: 338 PGKTYPLKGLSSDDCWSLLE 357


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/140 (48%), Positives = 95/140 (67%)
 Frame = -1

Query: 422 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVKRITKSIIESATHNVIDLMDLD 243
           GM G+GKTTL QLV+ND  ++ HF L+MWV V++DF+ +R+TKSI+ES      DLMDL+
Sbjct: 198 GMGGLGKTTLAQLVFNDETVARHFDLKMWVCVSDDFNAQRLTKSILESVERKSCDLMDLN 257

Query: 242 PLQVTXXXXXXXXXXXXXLDDVWNESYNDWNILQAPLRVGAPGSKILITTRSQIVSKIMM 63
            LQ +             LDDVW+E  +DW++++ P R GA GSKI++TTRS+ V+ I  
Sbjct: 258 ILQTSLQDRLRGKRFLLVLDDVWHEKKSDWDVVRLPFRAGASGSKIIVTTRSEKVASITG 317

Query: 62  TSHVISLQGLADDDCWSLFK 3
           T     L+GL+++DCW LFK
Sbjct: 318 TFPPFRLEGLSENDCWLLFK 337


>emb|CBI28588.3| unnamed protein product [Vitis vinifera]
          Length = 1092

 Score =  141 bits (356), Expect = 5e-32
 Identities = 73/140 (52%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
 Frame = -1

Query: 422 GMAGIGKTTLTQLVYNDAVISEHFQLRMWVSVNNDFDVKRITKSIIESATHNVIDLMDLD 243
           GM G GKTTL QLVYND  + EHF LR+WV V+++FDV RIT SI+ S +    DL D  
Sbjct: 147 GMGGAGKTTLAQLVYNDKRVQEHFDLRVWVCVSDEFDVARITMSILYSVSWTNNDLQDFG 206

Query: 242 PLQVTXXXXXXXXXXXXXLDDVWNESYNDWNILQAPLRVGAPGSKILITTRSQIVSKIM- 66
            +QV              LDDVWNE Y+ W+IL++P   GA GSKI+ITTRS+ V+ IM 
Sbjct: 207 QVQVKLRDALAGKKFLLVLDDVWNEEYSKWDILRSPFEAGAKGSKIIITTRSEAVAMIMG 266

Query: 65  MTSHVISLQGLADDDCWSLF 6
            T H+  L  L++DDCWSLF
Sbjct: 267 RTVHLFRLGVLSEDDCWSLF 286


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