BLASTX nr result

ID: Coptis21_contig00018841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018841
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20163.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002283414.1| PREDICTED: probable disease resistance prote...   113   2e-23
emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]   111   7e-23
ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichoca...   106   2e-21
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...   106   2e-21

>emb|CBI20163.3| unnamed protein product [Vitis vinifera]
          Length = 984

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/121 (46%), Positives = 79/121 (65%)
 Frame = +1

Query: 13  VQEIGMEMATTRLIGKTTADKNFEMVWECLIGDEFQKIGVYGMGGVGKTTLMKNINNRLL 192
           +++ G  + TT+LIG+TT  +N E +W CL   E Q IGV+GMGG+GKTT++ +I+N LL
Sbjct: 131 LRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLL 190

Query: 193 QQQSRFKRVLWVTVSKDVNAQKFQSKIAKKVTLDLSAEQDEATXXXXXXXXXXXKGKFVL 372
           +++  F  V WVTVSKD + +K Q  IA+K+ LDLS E+DE             + KFVL
Sbjct: 191 EKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVL 250

Query: 373 I 375
           I
Sbjct: 251 I 251


>ref|XP_002283414.1| PREDICTED: probable disease resistance protein At4g27220-like
           [Vitis vinifera]
          Length = 1016

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/121 (46%), Positives = 79/121 (65%)
 Frame = +1

Query: 13  VQEIGMEMATTRLIGKTTADKNFEMVWECLIGDEFQKIGVYGMGGVGKTTLMKNINNRLL 192
           +++ G  + TT+LIG+TT  +N E +W CL   E Q IGV+GMGG+GKTT++ +I+N LL
Sbjct: 131 LRDEGRALLTTQLIGETTTKRNLEKIWTCLEKGEIQSIGVWGMGGIGKTTIVTHIHNLLL 190

Query: 193 QQQSRFKRVLWVTVSKDVNAQKFQSKIAKKVTLDLSAEQDEATXXXXXXXXXXXKGKFVL 372
           +++  F  V WVTVSKD + +K Q  IA+K+ LDLS E+DE             + KFVL
Sbjct: 191 EKKDTFGLVYWVTVSKDSSVRKLQDVIAEKINLDLSKEEDERLRSALLFEALQKEKKFVL 250

Query: 373 I 375
           I
Sbjct: 251 I 251


>emb|CAN61769.1| hypothetical protein VITISV_026771 [Vitis vinifera]
          Length = 1052

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/121 (46%), Positives = 77/121 (63%)
 Frame = +1

Query: 16  QEIGMEMATTRLIGKTTADKNFEMVWECLIGDEFQKIGVYGMGGVGKTTLMKNINNRLLQ 195
           Q+ G  + TT+LIG+TTA +N E +W CL   E Q IGV+GMGG+GKTT++ +I+NRLL+
Sbjct: 126 QDEGNALLTTQLIGETTAKRNLENIWTCLEKGEIQSIGVWGMGGIGKTTVVTHIHNRLLK 185

Query: 196 QQSRFKRVLWVTVSKDVNAQKFQSKIAKKVTLDLSAEQDEATXXXXXXXXXXXKGKFVLI 375
            +  F  V WVTVSK+ N ++ Q  IA K+ L  S E+DE             + KFVL+
Sbjct: 186 NRDTFGHVYWVTVSKESNIRRLQDVIAGKLNLHFSKEEDEKIRAALLSEALRKEKKFVLV 245

Query: 376 L 378
           L
Sbjct: 246 L 246


>ref|XP_002329156.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869825|gb|EEF06956.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 829

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/118 (46%), Positives = 76/118 (64%)
 Frame = +1

Query: 25  GMEMATTRLIGKTTADKNFEMVWECLIGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQS 204
           G  + TT+L+G+ + D+N EM+W  L+ D+   +G+YGMGGVGKT+L+ +I+N+LLQ+ S
Sbjct: 86  GEALLTTKLVGQAS-DRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPS 144

Query: 205 RFKRVLWVTVSKDVNAQKFQSKIAKKVTLDLSAEQDEATXXXXXXXXXXXKGKFVLIL 378
            F  V WVTVS++    K Q  IAK + LDLS E+DE             KGK VLIL
Sbjct: 145 SFNYVFWVTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLIL 202


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr
           resistance protein [Populus trichocarpa]
          Length = 1075

 Score =  106 bits (264), Expect = 2e-21
 Identities = 55/118 (46%), Positives = 76/118 (64%)
 Frame = +1

Query: 25  GMEMATTRLIGKTTADKNFEMVWECLIGDEFQKIGVYGMGGVGKTTLMKNINNRLLQQQS 204
           G  + TT+L+G+ + D+N EM+W  L+ D+   +G+YGMGGVGKT+L+ +I+N+LLQ+ S
Sbjct: 217 GEALLTTKLVGQAS-DRNKEMIWSWLMKDDVLSVGIYGMGGVGKTSLVTHIHNQLLQRPS 275

Query: 205 RFKRVLWVTVSKDVNAQKFQSKIAKKVTLDLSAEQDEATXXXXXXXXXXXKGKFVLIL 378
            F  V WVTVS++    K Q  IAK + LDLS E+DE             KGK VLIL
Sbjct: 276 SFNYVFWVTVSQNFTISKLQYLIAKAINLDLSNEEDEKKRAAKLSKALVAKGKSVLIL 333


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