BLASTX nr result

ID: Coptis21_contig00018835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018835
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38700.3| unnamed protein product [Vitis vinifera]              354   1e-95
ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [V...   351   9e-95
gb|ABX10440.1| 3-ketoacyl-CoA synthase 10 [Gossypium hirsutum]        334   1e-89
ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana...   325   9e-87
ref|XP_002889383.1| 3-ketoacyl-CoA synthase 1 [Arabidopsis lyrat...   325   9e-87

>emb|CBI38700.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  354 bits (908), Expect = 1e-95
 Identities = 177/256 (69%), Positives = 207/256 (80%)
 Frame = +2

Query: 32  VLVMESIEMDNERLTAEMAYINSSSAVIRIRRSLPDFLQSVKLKYVKLGYRLTCDYATVL 211
           VL M SIEMD ERLTAEMA+ +SSS VI+IR+ LPDFLQSVKLKYVKLGY  +C+ ATVL
Sbjct: 41  VLFMGSIEMDKERLTAEMAFKDSSSVVIKIRQKLPDFLQSVKLKYVKLGYGYSCNAATVL 100

Query: 212 RYAVXXXXXXXXXXXXXXXPFNRVSELWSSGAFQLDSVTGVIGSTVIGLILVVYLMKRPR 391
           ++ V                F+ VS+LW+S A  +D+ T V GS V+  +L VY  KRP 
Sbjct: 101 KFGVVLPLLVATVVQITGLRFDDVSDLWTSRALLVDTATAVTGSAVLLFLLGVYWAKRPS 160

Query: 392 PVYLVEFACYKADDERKMSIESFLKMTEENGAFQEDTIQFQKRISTRSGLGDETYFPRGI 571
           PVYLV+FACYK +D RKMS+ESFL+MTEENG F+E+T+QFQ+RISTRSGLGDETY P GI
Sbjct: 161 PVYLVDFACYKPEDGRKMSVESFLEMTEENGKFEEETVQFQRRISTRSGLGDETYLPSGI 220

Query: 572 TSRPPNLCMKEARAEAELVMFGALDSLFEKTGIQPRDVGILIVNCSLFNPTPSLSSMIVN 751
           TSRPPNLCMKEARAEAE VMFGALDSLF KTG++P D+GILIVNCSLFNPTPSLS+MIVN
Sbjct: 221 TSRPPNLCMKEARAEAEAVMFGALDSLFSKTGVKPSDIGILIVNCSLFNPTPSLSAMIVN 280

Query: 752 HYKMRSDIKSFNLGGM 799
           HYK+R+DI S+NLGGM
Sbjct: 281 HYKLRTDISSYNLGGM 296


>ref|XP_002264721.1| PREDICTED: 3-ketoacyl-CoA synthase 1-like [Vitis vinifera]
          Length = 530

 Score =  351 bits (901), Expect = 9e-95
 Identities = 175/253 (69%), Positives = 205/253 (81%)
 Frame = +2

Query: 41  MESIEMDNERLTAEMAYINSSSAVIRIRRSLPDFLQSVKLKYVKLGYRLTCDYATVLRYA 220
           M SIEMD ERLTAEMA+ +SSS VI+IR+ LPDFLQSVKLKYVKLGY  +C+ ATVL++ 
Sbjct: 1   MGSIEMDKERLTAEMAFKDSSSVVIKIRQKLPDFLQSVKLKYVKLGYGYSCNAATVLKFG 60

Query: 221 VXXXXXXXXXXXXXXXPFNRVSELWSSGAFQLDSVTGVIGSTVIGLILVVYLMKRPRPVY 400
           V                F+ VS+LW+S A  +D+ T V GS V+  +L VY  KRP PVY
Sbjct: 61  VVLPLLVATVVQITGLRFDDVSDLWTSRALLVDTATAVTGSAVLLFLLGVYWAKRPSPVY 120

Query: 401 LVEFACYKADDERKMSIESFLKMTEENGAFQEDTIQFQKRISTRSGLGDETYFPRGITSR 580
           LV+FACYK +D RKMS+ESFL+MTEENG F+E+T+QFQ+RISTRSGLGDETY P GITSR
Sbjct: 121 LVDFACYKPEDGRKMSVESFLEMTEENGKFEEETVQFQRRISTRSGLGDETYLPSGITSR 180

Query: 581 PPNLCMKEARAEAELVMFGALDSLFEKTGIQPRDVGILIVNCSLFNPTPSLSSMIVNHYK 760
           PPNLCMKEARAEAE VMFGALDSLF KTG++P D+GILIVNCSLFNPTPSLS+MIVNHYK
Sbjct: 181 PPNLCMKEARAEAEAVMFGALDSLFSKTGVKPSDIGILIVNCSLFNPTPSLSAMIVNHYK 240

Query: 761 MRSDIKSFNLGGM 799
           +R+DI S+NLGGM
Sbjct: 241 LRTDISSYNLGGM 253


>gb|ABX10440.1| 3-ketoacyl-CoA synthase 10 [Gossypium hirsutum]
          Length = 531

 Score =  334 bits (857), Expect = 1e-89
 Identities = 165/255 (64%), Positives = 207/255 (81%), Gaps = 3/255 (1%)
 Frame = +2

Query: 44  ESIEMDNERLTAEMAYINSSSAVIRIRRSLPDFLQSVKLKYVKLGYRLTCDYATVLRYAV 223
           +SIEMD ERLTAEMA+ +SSSAVI+IR+ LPDFLQSVKLKYVKLGY  +C+ ATVL +A+
Sbjct: 4   DSIEMDKERLTAEMAFKDSSSAVIKIRKRLPDFLQSVKLKYVKLGYGYSCNPATVLMFAL 63

Query: 224 XXXXXXXXXXXXXXXPFNRVSELWSSGAFQLDSV---TGVIGSTVIGLILVVYLMKRPRP 394
                            + VSELW++ A +L+S+   T + GS ++  +  +Y  KR RP
Sbjct: 64  IVPLFVVTAVQFTGLKLDGVSELWTNQALRLESIDAATRLAGSLILFFLFGLYYAKRSRP 123

Query: 395 VYLVEFACYKADDERKMSIESFLKMTEENGAFQEDTIQFQKRISTRSGLGDETYFPRGIT 574
           VYLV+FACYK +D+RKMS++SFLKMTE++GAF E+T+QFQ+RISTRSGLGD+TYFPRGIT
Sbjct: 124 VYLVDFACYKPEDDRKMSVDSFLKMTEDSGAFTEETLQFQRRISTRSGLGDKTYFPRGIT 183

Query: 575 SRPPNLCMKEARAEAELVMFGALDSLFEKTGIQPRDVGILIVNCSLFNPTPSLSSMIVNH 754
           S PPNLCM+EARAEAE VMFGA+D LF KTG+ P+++GILIVNCSLFNPTPSLS+MIVNH
Sbjct: 184 STPPNLCMEEARAEAETVMFGAVDELFAKTGVDPKEIGILIVNCSLFNPTPSLSAMIVNH 243

Query: 755 YKMRSDIKSFNLGGM 799
           YK+R++I S+NLGGM
Sbjct: 244 YKLRTNINSYNLGGM 258


>ref|NP_171620.2| 3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
           gi|75192344|sp|Q9MAM3.1|KCS1_ARATH RecName:
           Full=3-ketoacyl-CoA synthase 1; Short=KCS-1; AltName:
           Full=Very long-chain fatty acid condensing enzyme 1;
           Short=VLCFA condensing enzyme 1
           gi|6715643|gb|AAF26470.1|AC007323_11 T25K16.11
           [Arabidopsis thaliana] gi|18377664|gb|AAL66982.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|20465993|gb|AAM20218.1|
           putative fatty acid elongase 3-ketoacyl-CoA synthase 1
           [Arabidopsis thaliana] gi|332189120|gb|AEE27241.1|
           3-ketoacyl-CoA synthase 1 [Arabidopsis thaliana]
          Length = 528

 Score =  325 bits (832), Expect = 9e-87
 Identities = 163/251 (64%), Positives = 194/251 (77%)
 Frame = +2

Query: 47  SIEMDNERLTAEMAYINSSSAVIRIRRSLPDFLQSVKLKYVKLGYRLTCDYATVLRYAVX 226
           SIEMD ERLTAEMA+ +SSSAVIRIRR LPD L SVKLKYVKLG   +C+  T+L + + 
Sbjct: 6   SIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNVTTILFFLII 65

Query: 227 XXXXXXXXXXXXXXPFNRVSELWSSGAFQLDSVTGVIGSTVIGLILVVYLMKRPRPVYLV 406
                          F+  SELWS+ A QLD+ T +     +  +L +Y+  R +PVYLV
Sbjct: 66  LPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLV 125

Query: 407 EFACYKADDERKMSIESFLKMTEENGAFQEDTIQFQKRISTRSGLGDETYFPRGITSRPP 586
           +F+CYK +DERK+S++SFL MTEENG+F +DT+QFQ+RIS R+GLGDETY PRGITS PP
Sbjct: 126 DFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPP 185

Query: 587 NLCMKEARAEAELVMFGALDSLFEKTGIQPRDVGILIVNCSLFNPTPSLSSMIVNHYKMR 766
            L M EARAEAE VMFGALDSLFEKTGI+P +VGILIVNCSLFNPTPSLS+MIVNHYKMR
Sbjct: 186 KLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMR 245

Query: 767 SDIKSFNLGGM 799
            DIKS+NLGGM
Sbjct: 246 EDIKSYNLGGM 256


>ref|XP_002889383.1| 3-ketoacyl-CoA synthase 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335225|gb|EFH65642.1| 3-ketoacyl-CoA synthase 1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 528

 Score =  325 bits (832), Expect = 9e-87
 Identities = 163/251 (64%), Positives = 195/251 (77%)
 Frame = +2

Query: 47  SIEMDNERLTAEMAYINSSSAVIRIRRSLPDFLQSVKLKYVKLGYRLTCDYATVLRYAVX 226
           SIEMD ERLTAEMA+ +SSSAVIRIRR LPD L SVKLKYVKLG   +C+  T+L + + 
Sbjct: 6   SIEMDRERLTAEMAFRDSSSAVIRIRRRLPDLLTSVKLKYVKLGLHNSCNLTTILFFLII 65

Query: 227 XXXXXXXXXXXXXXPFNRVSELWSSGAFQLDSVTGVIGSTVIGLILVVYLMKRPRPVYLV 406
                          F+  SELWS+ A QLD+ T +     +  +L +Y+  R +PVYLV
Sbjct: 66  LPLTGTVLVQLTGLTFDTFSELWSNQAVQLDTATRLTCLVFLCFVLTLYVANRTKPVYLV 125

Query: 407 EFACYKADDERKMSIESFLKMTEENGAFQEDTIQFQKRISTRSGLGDETYFPRGITSRPP 586
           +F+CYK +DERK+S++SFL MTEENG+F +DT+QFQ+RIS R+GLGDETY PRGITS+PP
Sbjct: 126 DFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSKPP 185

Query: 587 NLCMKEARAEAELVMFGALDSLFEKTGIQPRDVGILIVNCSLFNPTPSLSSMIVNHYKMR 766
            L M EARAEAE VMFGALDSLFEKTGI+P +VGILIVNCSLFNPTPSLS+MIVNHYKMR
Sbjct: 186 KLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMR 245

Query: 767 SDIKSFNLGGM 799
            DIKS+NLGGM
Sbjct: 246 EDIKSYNLGGM 256


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