BLASTX nr result
ID: Coptis21_contig00018834
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018834
(1496 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica... 814 0.0
emb|CBI30650.3| unnamed protein product [Vitis vinifera] 808 0.0
ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helica... 781 0.0
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu... 780 0.0
ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2... 768 0.0
>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis vinifera]
Length = 695
Score = 814 bits (2102), Expect = 0.0
Identities = 413/498 (82%), Positives = 445/498 (89%)
Frame = -2
Query: 1495 FEDLTKPGATKIKFLTDGVLLREMMDDPLLTNYSVIMVDEAHERSLSTDILLGLLKKIQR 1316
FEDL+K G T +KFLTDGVLLREMMDDPLLT YSVIMVDEAHERSLSTDILLGLLKKIQR
Sbjct: 131 FEDLSKTGVTMVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSLSTDILLGLLKKIQR 190
Query: 1315 RRPELRIIISSATIEAKTMSSFFNTSRRANGKTVEAIEPRKDPAILSVEGRGFNVQIHYL 1136
RRPELR+IISSATIEAK+MS+FF TSR+ G E PR DPAILSVEGRGFNVQIH++
Sbjct: 191 RRPELRLIISSATIEAKSMSTFFQTSRKRRGLEGEESGPRTDPAILSVEGRGFNVQIHHI 250
Query: 1135 EEPASDYLQAAVSTVLSIHDQEPMGDILVFLTGQDDIDAAVQLLSEEAQNHKKHSSGLFV 956
EEP DYLQAAVSTVLSIH+QEPMGDILVFLTG++DIDAAVQLL+EEAQN+ KHSSGL V
Sbjct: 251 EEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQNNGKHSSGLVV 310
Query: 955 LPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 776
LPLYSGLSR DQDL+FSPTPRGKRKV++STNIAETSLTLEGIVYVVDSGFSKQRFYNPIS
Sbjct: 311 LPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 370
Query: 775 DIENLVVAPIXXXXXXXXXXXXXXXXXGKCYRLYTEEYFVNEMSAEGIPEMQRSNLVSCV 596
DIENLVVAPI GKCYRLYTEEYFVNEMSA IPEMQRSNLVSCV
Sbjct: 371 DIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCV 430
Query: 595 IQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGIIDDDAKLTSPIGFQVAEIPLDPM 416
IQLKALGIDNILGFDWPASP+PEAMIRALEVLYSLG++DDDAKLTSP+GFQVAEIPLDPM
Sbjct: 431 IQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPLGFQVAEIPLDPM 490
Query: 415 ISKMILSGSLLGCSEEVITIAAILSVQSIWVSVRGVQKEMDEVKLRFAAAEGDHVTYLNV 236
ISK ILS + LGCSEE+ITIAAILSVQSIWVS RG Q+E+DE K+RFAAAEGDHVTYL+V
Sbjct: 491 ISKTILSSNQLGCSEEIITIAAILSVQSIWVSARGAQRELDEAKMRFAAAEGDHVTYLSV 550
Query: 235 YKAFLQSSKSSQWCYKNFINYHAMKKVMETREQLKRITQRLGIALKSCERDTQVLRKAIT 56
YK F+QS KSSQWCYKNFINYHAMKKV+E REQL+RI QRLGI LKSCERD +V+RKA+T
Sbjct: 551 YKGFIQSGKSSQWCYKNFINYHAMKKVIEIREQLRRIAQRLGIVLKSCERDMEVVRKAVT 610
Query: 55 AGFFANACRLEAFSQAGM 2
AGFFANAC LEA SQ GM
Sbjct: 611 AGFFANACCLEAHSQGGM 628
>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 808 bits (2086), Expect = 0.0
Identities = 412/498 (82%), Positives = 444/498 (89%)
Frame = -2
Query: 1495 FEDLTKPGATKIKFLTDGVLLREMMDDPLLTNYSVIMVDEAHERSLSTDILLGLLKKIQR 1316
FEDL+K G T +KFLTDGVLLREMMDDPLLT YSVIMVDEAHERSLSTDILLGLLKKIQR
Sbjct: 131 FEDLSKTGVTMVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSLSTDILLGLLKKIQR 190
Query: 1315 RRPELRIIISSATIEAKTMSSFFNTSRRANGKTVEAIEPRKDPAILSVEGRGFNVQIHYL 1136
RRPELR+IISSATIEAK+MS+FF T +R G E PR DPAILSVEGRGFNVQIH++
Sbjct: 191 RRPELRLIISSATIEAKSMSTFFQTRKR-RGLEGEESGPRTDPAILSVEGRGFNVQIHHI 249
Query: 1135 EEPASDYLQAAVSTVLSIHDQEPMGDILVFLTGQDDIDAAVQLLSEEAQNHKKHSSGLFV 956
EEP DYLQAAVSTVLSIH+QEPMGDILVFLTG++DIDAAVQLL+EEAQN+ KHSSGL V
Sbjct: 250 EEPVPDYLQAAVSTVLSIHEQEPMGDILVFLTGENDIDAAVQLLNEEAQNNGKHSSGLVV 309
Query: 955 LPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 776
LPLYSGLSR DQDL+FSPTPRGKRKV++STNIAETSLTLEGIVYVVDSGFSKQRFYNPIS
Sbjct: 310 LPLYSGLSRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 369
Query: 775 DIENLVVAPIXXXXXXXXXXXXXXXXXGKCYRLYTEEYFVNEMSAEGIPEMQRSNLVSCV 596
DIENLVVAPI GKCYRLYTEEYFVNEMSA IPEMQRSNLVSCV
Sbjct: 370 DIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMSAHAIPEMQRSNLVSCV 429
Query: 595 IQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGIIDDDAKLTSPIGFQVAEIPLDPM 416
IQLKALGIDNILGFDWPASP+PEAMIRALEVLYSLG++DDDAKLTSP+GFQVAEIPLDPM
Sbjct: 430 IQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPLGFQVAEIPLDPM 489
Query: 415 ISKMILSGSLLGCSEEVITIAAILSVQSIWVSVRGVQKEMDEVKLRFAAAEGDHVTYLNV 236
ISK ILS + LGCSEE+ITIAAILSVQSIWVS RG Q+E+DE K+RFAAAEGDHVTYL+V
Sbjct: 490 ISKTILSSNQLGCSEEIITIAAILSVQSIWVSARGAQRELDEAKMRFAAAEGDHVTYLSV 549
Query: 235 YKAFLQSSKSSQWCYKNFINYHAMKKVMETREQLKRITQRLGIALKSCERDTQVLRKAIT 56
YK F+QS KSSQWCYKNFINYHAMKKV+E REQL+RI QRLGI LKSCERD +V+RKA+T
Sbjct: 550 YKGFIQSGKSSQWCYKNFINYHAMKKVIEIREQLRRIAQRLGIVLKSCERDMEVVRKAVT 609
Query: 55 AGFFANACRLEAFSQAGM 2
AGFFANAC LEA SQ GM
Sbjct: 610 AGFFANACCLEAHSQGGM 627
>ref|XP_004148780.1| PREDICTED: probable ATP-dependent RNA helicase DHX35-like [Cucumis
sativus] gi|449515633|ref|XP_004164853.1| PREDICTED:
probable ATP-dependent RNA helicase DHX35-like [Cucumis
sativus]
Length = 696
Score = 781 bits (2016), Expect = 0.0
Identities = 390/498 (78%), Positives = 438/498 (87%)
Frame = -2
Query: 1495 FEDLTKPGATKIKFLTDGVLLREMMDDPLLTNYSVIMVDEAHERSLSTDILLGLLKKIQR 1316
FEDLT P T++KFLTDGVLLREMMDDPLLT YSVIMVDEAHERS+STD+LLGLLKKIQR
Sbjct: 132 FEDLTNPDVTRVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDMLLGLLKKIQR 191
Query: 1315 RRPELRIIISSATIEAKTMSSFFNTSRRANGKTVEAIEPRKDPAILSVEGRGFNVQIHYL 1136
RRP+LR+IISSATIEAK+MS+FF S+R G E +EP+ +PAILSVEGRGFNVQI YL
Sbjct: 192 RRPDLRLIISSATIEAKSMSTFFQMSKRRRGLEGETLEPKVEPAILSVEGRGFNVQIFYL 251
Query: 1135 EEPASDYLQAAVSTVLSIHDQEPMGDILVFLTGQDDIDAAVQLLSEEAQNHKKHSSGLFV 956
EEP SDY+Q+AVSTVLSIH+QEP GDILVFLTGQDDIDAAVQLL EE QN +K S L V
Sbjct: 252 EEPVSDYVQSAVSTVLSIHEQEPPGDILVFLTGQDDIDAAVQLLIEEGQNDRKKSE-LIV 310
Query: 955 LPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 776
LPLYSGLSR +QDLIFSPTPRGKRKV++STNIAETSLTLEGIVYV+DSGFSKQRFYNPI+
Sbjct: 311 LPLYSGLSRAEQDLIFSPTPRGKRKVVISTNIAETSLTLEGIVYVIDSGFSKQRFYNPIT 370
Query: 775 DIENLVVAPIXXXXXXXXXXXXXXXXXGKCYRLYTEEYFVNEMSAEGIPEMQRSNLVSCV 596
DIE+L+VAPI GKCYRLYTEEYF+NEM AEGIPEMQRSNLV+CV
Sbjct: 371 DIESLIVAPISKASARQRTGRAGRIRPGKCYRLYTEEYFINEMPAEGIPEMQRSNLVTCV 430
Query: 595 IQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGIIDDDAKLTSPIGFQVAEIPLDPM 416
IQLKALGIDNILGFDWP+ P+PE M+RALEVLYSLG++DDDAKLTSPIGFQVAEIPL+PM
Sbjct: 431 IQLKALGIDNILGFDWPSPPSPEVMVRALEVLYSLGVLDDDAKLTSPIGFQVAEIPLEPM 490
Query: 415 ISKMILSGSLLGCSEEVITIAAILSVQSIWVSVRGVQKEMDEVKLRFAAAEGDHVTYLNV 236
ISKMIL+ LGCSEE++TIAA+LS+QSIW S RG QKE+DE +LRFAAAEGDHVT+LNV
Sbjct: 491 ISKMILASGELGCSEEIMTIAAVLSIQSIWASSRGAQKELDEARLRFAAAEGDHVTFLNV 550
Query: 235 YKAFLQSSKSSQWCYKNFINYHAMKKVMETREQLKRITQRLGIALKSCERDTQVLRKAIT 56
YK FLQS+KSSQWC+KNFINY AMKKVME REQL+RI QRLGI +KSCERDT +RKA+T
Sbjct: 551 YKGFLQSNKSSQWCHKNFINYQAMKKVMEVREQLRRIAQRLGIIMKSCERDTTAIRKAVT 610
Query: 55 AGFFANACRLEAFSQAGM 2
AGFFANAC++EA+S GM
Sbjct: 611 AGFFANACQIEAYSHNGM 628
>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 696
Score = 780 bits (2015), Expect = 0.0
Identities = 394/498 (79%), Positives = 437/498 (87%)
Frame = -2
Query: 1495 FEDLTKPGATKIKFLTDGVLLREMMDDPLLTNYSVIMVDEAHERSLSTDILLGLLKKIQR 1316
FEDLT TKIKFLTDGVLLREMMDDPLLT YSVIMVDEAHERS+STDILLGLLKKIQR
Sbjct: 132 FEDLTNSDVTKIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQR 191
Query: 1315 RRPELRIIISSATIEAKTMSSFFNTSRRANGKTVEAIEPRKDPAILSVEGRGFNVQIHYL 1136
RRPELR+IISSATIEAK+MS+FF S+R G + + PRK+PAILSVEGRGFNVQI Y+
Sbjct: 192 RRPELRLIISSATIEAKSMSAFFQASKRRRGLEADELGPRKEPAILSVEGRGFNVQILYV 251
Query: 1135 EEPASDYLQAAVSTVLSIHDQEPMGDILVFLTGQDDIDAAVQLLSEEAQNHKKHSSGLFV 956
EE +DY++A VSTVLSIHDQEP GDILVFLTGQDDIDAAVQLL+EEAQ K+SSGL V
Sbjct: 252 EEAVADYVRATVSTVLSIHDQEPAGDILVFLTGQDDIDAAVQLLTEEAQVKGKNSSGLIV 311
Query: 955 LPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 776
LPLYSGLSR +QDL+FSPTPRGKRK+++STNIAETSLT+EGIVYVVDSGFSKQRFYNPIS
Sbjct: 312 LPLYSGLSRAEQDLVFSPTPRGKRKIVISTNIAETSLTMEGIVYVVDSGFSKQRFYNPIS 371
Query: 775 DIENLVVAPIXXXXXXXXXXXXXXXXXGKCYRLYTEEYFVNEMSAEGIPEMQRSNLVSCV 596
D+ENLVVAPI GKCYRLYTEEYF+NEM +GIPEMQRSNLVS V
Sbjct: 372 DVENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFINEMPTQGIPEMQRSNLVSSV 431
Query: 595 IQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGIIDDDAKLTSPIGFQVAEIPLDPM 416
IQLKALGIDNILGFDWPASP+PEAMIRALEVLYSLGI+DDDAKLTSP+GFQVAE PL+PM
Sbjct: 432 IQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGILDDDAKLTSPVGFQVAESPLEPM 491
Query: 415 ISKMILSGSLLGCSEEVITIAAILSVQSIWVSVRGVQKEMDEVKLRFAAAEGDHVTYLNV 236
ISKMILS + LGCSEE+ITIAA+LS+QSIW+S R QKE+DE KLRFAAAEGDHVT+LNV
Sbjct: 492 ISKMILSSNQLGCSEEIITIAAVLSIQSIWISTR-AQKELDEAKLRFAAAEGDHVTFLNV 550
Query: 235 YKAFLQSSKSSQWCYKNFINYHAMKKVMETREQLKRITQRLGIALKSCERDTQVLRKAIT 56
Y+ FLQS KSSQWC+KNF+NYHAMKKV+E REQL+RI R+GI LKSCERD ++RKA+T
Sbjct: 551 YQGFLQSGKSSQWCHKNFVNYHAMKKVIEVREQLRRIALRIGIVLKSCERDMLIVRKAVT 610
Query: 55 AGFFANACRLEAFSQAGM 2
AGFFANACRLEAFS GM
Sbjct: 611 AGFFANACRLEAFSHNGM 628
>ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1|
predicted protein [Populus trichocarpa]
Length = 702
Score = 768 bits (1983), Expect = 0.0
Identities = 391/498 (78%), Positives = 428/498 (85%)
Frame = -2
Query: 1495 FEDLTKPGATKIKFLTDGVLLREMMDDPLLTNYSVIMVDEAHERSLSTDILLGLLKKIQR 1316
FED+T P AT IKFLTDGVLLRE+M+DPLLT YSVIMVDEAHERS+STDILLGLLKKIQR
Sbjct: 136 FEDVTNPAATMIKFLTDGVLLREIMNDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQR 195
Query: 1315 RRPELRIIISSATIEAKTMSSFFNTSRRANGKTVEAIEPRKDPAILSVEGRGFNVQIHYL 1136
RRPELR+IISSATIEAK+MS FF TS++ G PRK PAILSVEGRGFNV IHY+
Sbjct: 196 RRPELRLIISSATIEAKSMSDFFQTSKKHRGPEDHEFVPRKVPAILSVEGRGFNVHIHYV 255
Query: 1135 EEPASDYLQAAVSTVLSIHDQEPMGDILVFLTGQDDIDAAVQLLSEEAQNHKKHSSGLFV 956
EP SDY+QA VSTVLSIH+QEP GDILVFLTGQDDID A++LL+EEA +K SSGL V
Sbjct: 256 VEPVSDYVQATVSTVLSIHEQEPAGDILVFLTGQDDIDTAIRLLTEEAHASRKISSGLIV 315
Query: 955 LPLYSGLSRTDQDLIFSPTPRGKRKVIVSTNIAETSLTLEGIVYVVDSGFSKQRFYNPIS 776
LPLYS L R DQDL+FSPTPRGKRKV++STNIAETSLTLEG+VYVVDSGFSKQ+FYNPIS
Sbjct: 316 LPLYSSLPRADQDLVFSPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFSKQQFYNPIS 375
Query: 775 DIENLVVAPIXXXXXXXXXXXXXXXXXGKCYRLYTEEYFVNEMSAEGIPEMQRSNLVSCV 596
DIENLVVAPI GKCYRLYTEEYFVNEMS+ GIPEMQRS LVSCV
Sbjct: 376 DIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVNEMSSVGIPEMQRSKLVSCV 435
Query: 595 IQLKALGIDNILGFDWPASPAPEAMIRALEVLYSLGIIDDDAKLTSPIGFQVAEIPLDPM 416
IQLKALGIDNILGFDWPASP PEAMIRALEVLYSLG++DDDAKLTSP+GFQ AEIPLDPM
Sbjct: 436 IQLKALGIDNILGFDWPASPPPEAMIRALEVLYSLGVLDDDAKLTSPVGFQAAEIPLDPM 495
Query: 415 ISKMILSGSLLGCSEEVITIAAILSVQSIWVSVRGVQKEMDEVKLRFAAAEGDHVTYLNV 236
ISKMILS + LGCS+E+ITIAAILS+QSIWVS RGVQKE+DE KLRFAAAEGDHVT+LNV
Sbjct: 496 ISKMILSSNQLGCSDEIITIAAILSIQSIWVSGRGVQKELDEAKLRFAAAEGDHVTFLNV 555
Query: 235 YKAFLQSSKSSQWCYKNFINYHAMKKVMETREQLKRITQRLGIALKSCERDTQVLRKAIT 56
YK FLQS KSSQWC+KN++NY AMKKV+E REQL+R RLGI LKSCE D +RKA+T
Sbjct: 556 YKGFLQSGKSSQWCHKNYMNYQAMKKVIEIREQLRRTALRLGIVLKSCEGDMLAVRKAVT 615
Query: 55 AGFFANACRLEAFSQAGM 2
AGFFANA RLEAFS GM
Sbjct: 616 AGFFANASRLEAFSHNGM 633