BLASTX nr result

ID: Coptis21_contig00018821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018821
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped co...   195   3e-48
emb|CBI32999.3| unnamed protein product [Vitis vinifera]              195   3e-48
ref|XP_002518418.1| 26S protease regulatory subunit, putative [R...   192   2e-47
ref|XP_004166040.1| PREDICTED: ATPase family AAA domain-containi...   189   2e-46

>ref|XP_002331561.1| predicted protein [Populus trichocarpa] gi|222873785|gb|EEF10916.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  202 bits (513), Expect = 3e-50
 Identities = 102/142 (71%), Positives = 117/142 (82%)
 Frame = +3

Query: 3   IDGFEQEKKVVVIAATNRKEDLDPALISRFDSMIEFGLPDQQNRQEIAAQYAKHLKESEL 182
           IDGFEQ+KKVVVIAATNRK+DLDPALISRFDSMI FGLPD+QNRQEIAAQYAKHL ESEL
Sbjct: 419 IDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDRQNRQEIAAQYAKHLTESEL 478

Query: 183 VEFAAATEEMSGRDIRDVCQQAERHWASKIIRGQVSSEAEQGCLPPLQEYIDSALTRRNA 362
            EFA  TE+MSGRDIRDVCQQAER WASKIIRGQ S +  QG LPPL EY +SA+ RR A
Sbjct: 479 EEFARVTEDMSGRDIRDVCQQAERSWASKIIRGQASKDGGQGNLPPLAEYTESAMNRRKA 538

Query: 363 LLTLQGKKNQYTSSETKKSPME 428
           L ++  +K+Q +    +K  ++
Sbjct: 539 LASIAEQKSQGSIMRPQKPQLD 560


>ref|XP_002267342.2| PREDICTED: AAA ATPase forming ring-shaped complexes-like [Vitis
           vinifera] gi|297741773|emb|CBI33002.3| unnamed protein
           product [Vitis vinifera]
          Length = 596

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/130 (73%), Positives = 111/130 (85%)
 Frame = +3

Query: 3   IDGFEQEKKVVVIAATNRKEDLDPALISRFDSMIEFGLPDQQNRQEIAAQYAKHLKESEL 182
           IDGFEQ+KKVVVIAATNRK+DLDPAL+SRFDSMI FGLPD  +RQ+IAAQ+AKHL ESEL
Sbjct: 453 IDGFEQDKKVVVIAATNRKQDLDPALMSRFDSMITFGLPDNHDRQKIAAQFAKHLTESEL 512

Query: 183 VEFAAATEEMSGRDIRDVCQQAERHWASKIIRGQVSSEAEQGCLPPLQEYIDSALTRRNA 362
           VEFA ATE MSGRDIRD+CQQAERHWASK+IRGQ   + +Q  LPP+Q YI+SA TR N 
Sbjct: 513 VEFATATEGMSGRDIRDICQQAERHWASKVIRGQAPKDGDQVILPPIQVYIESAKTRANT 572

Query: 363 LLTLQGKKNQ 392
           LL++  +K +
Sbjct: 573 LLSIADQKTE 582


>emb|CBI32999.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  195 bits (496), Expect = 3e-48
 Identities = 95/130 (73%), Positives = 111/130 (85%)
 Frame = +3

Query: 3   IDGFEQEKKVVVIAATNRKEDLDPALISRFDSMIEFGLPDQQNRQEIAAQYAKHLKESEL 182
           IDGFEQ+KKVVVIAATNRK+DLDPAL+SRFDSMI FGLPD  +RQ+IAAQ+AKHL ESEL
Sbjct: 108 IDGFEQDKKVVVIAATNRKQDLDPALMSRFDSMITFGLPDNHDRQKIAAQFAKHLTESEL 167

Query: 183 VEFAAATEEMSGRDIRDVCQQAERHWASKIIRGQVSSEAEQGCLPPLQEYIDSALTRRNA 362
           VEFA ATE MSGRDIRD+CQQAERHWASK+IRGQ   + +Q  LPP+Q YI+SA TR N 
Sbjct: 168 VEFATATEGMSGRDIRDICQQAERHWASKVIRGQAPKDGDQVILPPIQVYIESAKTRANT 227

Query: 363 LLTLQGKKNQ 392
           LL++  +K +
Sbjct: 228 LLSIADQKTE 237


>ref|XP_002518418.1| 26S protease regulatory subunit, putative [Ricinus communis]
           gi|223542263|gb|EEF43805.1| 26S protease regulatory
           subunit, putative [Ricinus communis]
          Length = 587

 Score =  192 bits (489), Expect = 2e-47
 Identities = 97/146 (66%), Positives = 115/146 (78%)
 Frame = +3

Query: 3   IDGFEQEKKVVVIAATNRKEDLDPALISRFDSMIEFGLPDQQNRQEIAAQYAKHLKESEL 182
           IDGFEQ+KKVVVIAATNRK+DLDPALISRFDSMI FGLPD+QNRQEI AQYAKHLK S++
Sbjct: 442 IDGFEQDKKVVVIAATNRKQDLDPALISRFDSMITFGLPDEQNRQEIVAQYAKHLKRSDI 501

Query: 183 VEFAAATEEMSGRDIRDVCQQAERHWASKIIRGQVSSEAEQGCLPPLQEYIDSALTRRNA 362
            E A  T++MSGRDI+DVCQQAER WASKIIRG+   + EQG LP L EYI+SAL RR A
Sbjct: 502 EELAKVTDQMSGRDIKDVCQQAERSWASKIIRGKADRDGEQGNLPTLSEYIESALIRRQA 561

Query: 363 LLTLQGKKNQYTSSETKKSPMELA*C 440
           LL++  +++   +    +S   L  C
Sbjct: 562 LLSIADQRSGGFNPSRSRSGSRLDLC 587


>ref|XP_004166040.1| PREDICTED: ATPase family AAA domain-containing protein 1-B-like
           [Cucumis sativus]
          Length = 521

 Score =  189 bits (480), Expect = 2e-46
 Identities = 94/141 (66%), Positives = 113/141 (80%)
 Frame = +3

Query: 3   IDGFEQEKKVVVIAATNRKEDLDPALISRFDSMIEFGLPDQQNRQEIAAQYAKHLKESEL 182
           IDGFEQ++KV+VIAATNRK+DLDPALISRFD MI FGLPD++NR+EIAAQYAK L + EL
Sbjct: 380 IDGFEQDRKVIVIAATNRKQDLDPALISRFDMMITFGLPDERNREEIAAQYAKQLTQPEL 439

Query: 183 VEFAAATEEMSGRDIRDVCQQAERHWASKIIRGQVSSEAEQGCLPPLQEYIDSALTRRNA 362
            EFA  TE MSGRDIRD+CQQAER WASKIIRG+VS   E G LPPL+EYI+ A+ RR A
Sbjct: 440 KEFARNTEGMSGRDIRDICQQAERSWASKIIRGKVSKTGEHGILPPLEEYIECAMNRRKA 499

Query: 363 LLTLQGKKNQYTSSETKKSPM 425
           L T+   + +  +  TKK+ +
Sbjct: 500 LQTIDDHEIKDPNIRTKKTQL 520


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