BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018820
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 ...   339   2e-91
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              339   2e-91
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   336   1e-90
ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [S...   332   2e-89
ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   332   3e-89

>ref|XP_002275304.2| PREDICTED: DNA mismatch repair protein Msh2 [Vitis vinifera]
          Length = 902

 Score =  339 bits (870), Expect = 2e-91
 Identities = 163/183 (89%), Positives = 176/183 (96%)
 Frame = -2

Query: 550  NDCTLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 371
            NDC LVR +SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD+A+ISVRDCIFARV
Sbjct: 610  NDCKLVREKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKANISVRDCIFARV 669

Query: 370  GAGDCQLRGVSTFMQEMLETASIIKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVE 191
            GAGDCQLRGVSTFMQEMLETASI+KGATDKSLIIIDELGRGTSTYDGFGLAWAICEH+VE
Sbjct: 670  GAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVE 729

Query: 190  VTRAPTLFATHFHELTALAYENADNEPSKKSTLGVANFHVSAHIDSSTRKLTMLYKVEPG 11
            V +APTLFATHFHELTALA+EN D++P +K  +GVAN+HVSAHIDSS+RKLTMLYKVEPG
Sbjct: 730  VIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVSAHIDSSSRKLTMLYKVEPG 789

Query: 10   ACD 2
            ACD
Sbjct: 790  ACD 792


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  339 bits (870), Expect = 2e-91
 Identities = 163/183 (89%), Positives = 176/183 (96%)
 Frame = -2

Query: 550  NDCTLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 371
            NDC LVR +SWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD+A+ISVRDCIFARV
Sbjct: 650  NDCKLVREKSWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKANISVRDCIFARV 709

Query: 370  GAGDCQLRGVSTFMQEMLETASIIKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVE 191
            GAGDCQLRGVSTFMQEMLETASI+KGATDKSLIIIDELGRGTSTYDGFGLAWAICEH+VE
Sbjct: 710  GAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVE 769

Query: 190  VTRAPTLFATHFHELTALAYENADNEPSKKSTLGVANFHVSAHIDSSTRKLTMLYKVEPG 11
            V +APTLFATHFHELTALA+EN D++P +K  +GVAN+HVSAHIDSS+RKLTMLYKVEPG
Sbjct: 770  VIKAPTLFATHFHELTALAHENTDHQPPEKQIVGVANYHVSAHIDSSSRKLTMLYKVEPG 829

Query: 10   ACD 2
            ACD
Sbjct: 830  ACD 832


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  336 bits (862), Expect = 1e-90
 Identities = 165/183 (90%), Positives = 174/183 (95%)
 Frame = -2

Query: 550  NDCTLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 371
            NDC LVRG++WFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD ASISVRDCIFARV
Sbjct: 651  NDCKLVRGKTWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDNASISVRDCIFARV 710

Query: 370  GAGDCQLRGVSTFMQEMLETASIIKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVE 191
            GAGDCQLRGVSTFMQEMLETASI+KGATDKSLIIIDELGRGTSTYDGFGLAWAICEH+VE
Sbjct: 711  GAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVE 770

Query: 190  VTRAPTLFATHFHELTALAYENADNEPSKKSTLGVANFHVSAHIDSSTRKLTMLYKVEPG 11
            V +APTLFATHFHELTALA EN  N+ S+K  +GVAN+HVSAHIDSSTRKLTMLYKVEPG
Sbjct: 771  VIKAPTLFATHFHELTALALENVSND-SQKQIVGVANYHVSAHIDSSTRKLTMLYKVEPG 829

Query: 10   ACD 2
            ACD
Sbjct: 830  ACD 832


>ref|XP_002463122.1| hypothetical protein SORBIDRAFT_02g038230 [Sorghum bicolor]
            gi|241926499|gb|EER99643.1| hypothetical protein
            SORBIDRAFT_02g038230 [Sorghum bicolor]
          Length = 942

 Score =  332 bits (852), Expect = 2e-89
 Identities = 160/183 (87%), Positives = 175/183 (95%)
 Frame = -2

Query: 550  NDCTLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 371
            NDCTLVRG+SWFQIITGPNMGGKSTFIRQVGVN+LMAQVGSFVPCD+AS+SVRDCIFARV
Sbjct: 651  NDCTLVRGKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDQASVSVRDCIFARV 710

Query: 370  GAGDCQLRGVSTFMQEMLETASIIKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVE 191
            GAGDCQL GVSTFMQEMLETASI+KGA+DKSLIIIDELGRGTSTYDGFGLAWAICEHL+E
Sbjct: 711  GAGDCQLHGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLME 770

Query: 190  VTRAPTLFATHFHELTALAYENADNEPSKKSTLGVANFHVSAHIDSSTRKLTMLYKVEPG 11
            VTRAPTLFATHFHELTALA++N D+E  + S +G+AN+HV AHID S+RKLTMLYKVEPG
Sbjct: 771  VTRAPTLFATHFHELTALAHKN-DDEHQRVSNIGIANYHVGAHIDPSSRKLTMLYKVEPG 829

Query: 10   ACD 2
            ACD
Sbjct: 830  ACD 832


>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
            gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
            MSH2, putative [Ricinus communis]
          Length = 936

 Score =  332 bits (850), Expect = 3e-89
 Identities = 164/183 (89%), Positives = 170/183 (92%)
 Frame = -2

Query: 550  NDCTLVRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDRASISVRDCIFARV 371
            NDC L+RGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCD+ASISVRDCIFARV
Sbjct: 646  NDCKLIRGESWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARV 705

Query: 370  GAGDCQLRGVSTFMQEMLETASIIKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVE 191
            GAGDCQLRGVSTFMQEMLETASI+KGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLV+
Sbjct: 706  GAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQ 765

Query: 190  VTRAPTLFATHFHELTALAYENADNEPSKKSTLGVANFHVSAHIDSSTRKLTMLYKVEPG 11
            V +APTLFATHFHELT LA E A  EP  K   GVAN+HVSAHIDSS RKLTMLYKVEPG
Sbjct: 766  VIKAPTLFATHFHELTGLADEKA--EPHMKQIAGVANYHVSAHIDSSNRKLTMLYKVEPG 823

Query: 10   ACD 2
            ACD
Sbjct: 824  ACD 826