BLASTX nr result

ID: Coptis21_contig00018817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018817
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37979.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002269318.1| PREDICTED: probable polyprenol reductase 2-l...   102   4e-20
ref|XP_002270436.1| PREDICTED: probable polyprenol reductase 2 [...    93   3e-17
emb|CAN70612.1| hypothetical protein VITISV_004839 [Vitis vinifera]    93   3e-17
ref|XP_002872763.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family...    88   6e-16

>emb|CBI37979.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +2

Query: 2   KMVPLGNELLHYSTIASHLTGGSHIFSILKSHLTPLERRYTVWRTVLLLLLMEVQVWRRL 181
           +M PL +E L YST+AS LTGGSHIFS+ KS  TPLE RY VWR+V LLLLMEVQV RRL
Sbjct: 85  RMAPLVSEPLLYSTVASQLTGGSHIFSLHKSRSTPLEHRYLVWRSVFLLLLMEVQVMRRL 144

Query: 182 FETVYVFSYS 211
           +ET+YVF+YS
Sbjct: 145 YETIYVFNYS 154


>ref|XP_002269318.1| PREDICTED: probable polyprenol reductase 2-like [Vitis vinifera]
          Length = 338

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/70 (71%), Positives = 58/70 (82%)
 Frame = +2

Query: 2   KMVPLGNELLHYSTIASHLTGGSHIFSILKSHLTPLERRYTVWRTVLLLLLMEVQVWRRL 181
           +M PL +E L YST+AS LTGGSHIFS+ KS  TPLE RY VWR+V LLLLMEVQV RRL
Sbjct: 85  RMAPLVSEPLLYSTVASQLTGGSHIFSLHKSRSTPLEHRYLVWRSVFLLLLMEVQVMRRL 144

Query: 182 FETVYVFSYS 211
           +ET+YVF+YS
Sbjct: 145 YETIYVFNYS 154


>ref|XP_002270436.1| PREDICTED: probable polyprenol reductase 2 [Vitis vinifera]
           gi|297735038|emb|CBI17400.3| unnamed protein product
           [Vitis vinifera]
          Length = 336

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   KMVPLGNELLHYSTIASHLTGGSHIFSILKSHLTPLERRYTVWRTVLLLLLMEVQVWRRL 181
           KM PL +  L YSTIASHLTGGSHI S+ KS  T  + RY VWR V LLLLME+ V RRL
Sbjct: 85  KMAPLDSVSLDYSTIASHLTGGSHILSLHKSRSTSAQHRYRVWRPVFLLLLMELHVMRRL 144

Query: 182 FETVYVFSYS 211
           +ET+YVF+YS
Sbjct: 145 YETLYVFNYS 154


>emb|CAN70612.1| hypothetical protein VITISV_004839 [Vitis vinifera]
          Length = 385

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 46/70 (65%), Positives = 53/70 (75%)
 Frame = +2

Query: 2   KMVPLGNELLHYSTIASHLTGGSHIFSILKSHLTPLERRYTVWRTVLLLLLMEVQVWRRL 181
           KM PL +  L YSTIASHLTGGSHI S+ KS  T  + RY VWR V LLLLME+ V RRL
Sbjct: 134 KMAPLDSVSLDYSTIASHLTGGSHILSLHKSRSTSAQHRYRVWRPVFLLLLMELHVMRRL 193

Query: 182 FETVYVFSYS 211
           +ET+YVF+YS
Sbjct: 194 YETLYVFNYS 203


>ref|XP_002872763.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297318600|gb|EFH49022.1|
           3-oxo-5-alpha-steroid 4-dehydrogenase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/70 (60%), Positives = 49/70 (70%)
 Frame = +2

Query: 2   KMVPLGNELLHYSTIASHLTGGSHIFSILKSHLTPLERRYTVWRTVLLLLLMEVQVWRRL 181
           KM PL +E    S IAS L GGSH+FS  KSH+TP+E R  VWR + LLLLME+ V RRL
Sbjct: 89  KMAPLSSEEFQLSDIASRLAGGSHVFSFYKSHMTPVEHRLKVWRALFLLLLMEIHVLRRL 148

Query: 182 FETVYVFSYS 211
            E+ YVF YS
Sbjct: 149 IESFYVFKYS 158


Top