BLASTX nr result

ID: Coptis21_contig00018813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018813
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis...   626   e-177
emb|CBI33503.3| unnamed protein product [Vitis vinifera]              626   e-177
ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis...   624   e-176
ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|2...   616   e-174
emb|CBI29095.3| unnamed protein product [Vitis vinifera]              614   e-173

>ref|XP_003633739.1| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 958

 Score =  626 bits (1615), Expect = e-177
 Identities = 320/411 (77%), Positives = 348/411 (84%)
 Frame = -3

Query: 1244 GHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKEFG 1065
            GHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKEFG
Sbjct: 546  GHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFG 605

Query: 1064 TDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENIIAY 885
            TDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+A 
Sbjct: 606  TDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETILAC 665

Query: 884  KFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYIET 705
            KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYIE 
Sbjct: 666  KFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEA 725

Query: 704  SKARLYQSEGNSMASVAQAVLFYVFENILKMLHPFMPFVTEELWQSLPHRKEALIVSPWP 525
            SKARLY S G+   SVAQAVL YVFENILKMLHPFMPFVTE LWQ+LP+RKEAL+ S WP
Sbjct: 726  SKARLYHSGGH---SVAQAVLLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWP 782

Query: 524  ETKLPRNLNSIKRFENLQALTRAIRNARAEYSVEPAKRISASIVAKEDVLQYISTEKKVL 345
            +T LP + +SIK+FENLQ+LTRAIRNARAEYSVEPAKRISASIVA  +V+QYIS EK+VL
Sbjct: 783  QTSLPMHASSIKKFENLQSLTRAIRNARAEYSVEPAKRISASIVAGNEVIQYISKEKEVL 842

Query: 344  ALLCKLDLQNVDFTDSPPGDGKHLVHLVADEGLEAYLPLEDMIDISAEVQRLSKRLLKMQ 165
            ALL +LDLQN+ FTDSPPGD    VHLVA EGLEAYLPL DMID+SAEV+RLSKRL KMQ
Sbjct: 843  ALLSRLDLQNIHFTDSPPGDANQSVHLVAGEGLEAYLPLSDMIDVSAEVERLSKRLSKMQ 902

Query: 164  IEYDALVARLNSEKFVEKAPEKVVLXXXXXXXXXXXKITLTKSRLQLLQST 12
             E+D L ARL+S KFVEKAPE++V            KITLTK+RL  LQST
Sbjct: 903  EEFDRLAARLSSPKFVEKAPEEIVSGVREKAAEAEEKITLTKNRLAFLQST 953


>emb|CBI33503.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  626 bits (1615), Expect = e-177
 Identities = 320/411 (77%), Positives = 348/411 (84%)
 Frame = -3

Query: 1244 GHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKEFG 1065
            GHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKEFG
Sbjct: 241  GHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFG 300

Query: 1064 TDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENIIAY 885
            TDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+A 
Sbjct: 301  TDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETILAC 360

Query: 884  KFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYIET 705
            KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYIE 
Sbjct: 361  KFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEA 420

Query: 704  SKARLYQSEGNSMASVAQAVLFYVFENILKMLHPFMPFVTEELWQSLPHRKEALIVSPWP 525
            SKARLY S G+   SVAQAVL YVFENILKMLHPFMPFVTE LWQ+LP+RKEAL+ S WP
Sbjct: 421  SKARLYHSGGH---SVAQAVLLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWP 477

Query: 524  ETKLPRNLNSIKRFENLQALTRAIRNARAEYSVEPAKRISASIVAKEDVLQYISTEKKVL 345
            +T LP + +SIK+FENLQ+LTRAIRNARAEYSVEPAKRISASIVA  +V+QYIS EK+VL
Sbjct: 478  QTSLPMHASSIKKFENLQSLTRAIRNARAEYSVEPAKRISASIVAGNEVIQYISKEKEVL 537

Query: 344  ALLCKLDLQNVDFTDSPPGDGKHLVHLVADEGLEAYLPLEDMIDISAEVQRLSKRLLKMQ 165
            ALL +LDLQN+ FTDSPPGD    VHLVA EGLEAYLPL DMID+SAEV+RLSKRL KMQ
Sbjct: 538  ALLSRLDLQNIHFTDSPPGDANQSVHLVAGEGLEAYLPLSDMIDVSAEVERLSKRLSKMQ 597

Query: 164  IEYDALVARLNSEKFVEKAPEKVVLXXXXXXXXXXXKITLTKSRLQLLQST 12
             E+D L ARL+S KFVEKAPE++V            KITLTK+RL  LQST
Sbjct: 598  EEFDRLAARLSSPKFVEKAPEEIVSGVREKAAEAEEKITLTKNRLAFLQST 648


>ref|XP_002270806.2| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]
          Length = 959

 Score =  624 bits (1610), Expect = e-176
 Identities = 320/411 (77%), Positives = 348/411 (84%)
 Frame = -3

Query: 1244 GHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKEFG 1065
            GHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKEFG
Sbjct: 547  GHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTIKEFG 606

Query: 1064 TDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENIIAY 885
            TDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE I+A 
Sbjct: 607  TDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWETILAC 666

Query: 884  KFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYIET 705
            KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADWYIE 
Sbjct: 667  KFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADWYIEA 726

Query: 704  SKARLYQSEGNSMASVAQAVLFYVFENILKMLHPFMPFVTEELWQSLPHRKEALIVSPWP 525
            SKARLY S G+   SVAQAVL YVFENILKMLHPFMPFVTE LWQ+LP+RKEAL+ S WP
Sbjct: 727  SKARLYHSGGH---SVAQAVLLYVFENILKMLHPFMPFVTEALWQALPNRKEALMNSSWP 783

Query: 524  ETKLPRNLNSIKRFENLQALTRAIRNARAEYSVEPAKRISASIVAKEDVLQYISTEKKVL 345
            +T LP + +SIK+FENLQ+LTRAIRNARAEYSVEPAKRISASIVA  +V+QYIS EK+VL
Sbjct: 784  QTSLPMHASSIKKFENLQSLTRAIRNARAEYSVEPAKRISASIVAGNEVIQYISKEKEVL 843

Query: 344  ALLCKLDLQNVDFTDSPPGDGKHLVHLVADEGLEAYLPLEDMIDISAEVQRLSKRLLKMQ 165
            ALL +LDLQNV FTDSPPGD    VHLVA EGLEAYLPL DMID+SAEV+RLSKRL KMQ
Sbjct: 844  ALLSRLDLQNVHFTDSPPGDANLSVHLVASEGLEAYLPLSDMIDVSAEVERLSKRLSKMQ 903

Query: 164  IEYDALVARLNSEKFVEKAPEKVVLXXXXXXXXXXXKITLTKSRLQLLQST 12
             E+D L ARL+S KFVEKAPE++V            KITLTK+RL  L+ST
Sbjct: 904  EEFDRLAARLSSPKFVEKAPEEIVSGVREKAAEAEEKITLTKNRLAFLKST 954


>ref|XP_002301705.1| predicted protein [Populus trichocarpa] gi|222843431|gb|EEE80978.1|
            predicted protein [Populus trichocarpa]
          Length = 951

 Score =  616 bits (1589), Expect = e-174
 Identities = 316/422 (74%), Positives = 347/422 (82%), Gaps = 11/422 (2%)
 Frame = -3

Query: 1244 GHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQGRKMSKTLGNVIDPVDTIKEFG 1065
            GHDILFFWVARMVMMGIEFTGTVPFS VYLHGLI+DSQGRKMSKTLGNVIDP+DTIKEFG
Sbjct: 525  GHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPLDTIKEFG 584

Query: 1064 TDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWENIIAY 885
            TDALRFT++LGTAGQDLNLS ERL++NKAFTNKLWNAGKF+LQN+PSQ+DVSAWE I   
Sbjct: 585  TDALRFTISLGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLQNMPSQTDVSAWEAIRNC 644

Query: 884  KFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADWYIET 705
            KFD           ECWVVS+LH LID VT SY+K+FFGDVGREIYDFFW DFADWYIE 
Sbjct: 645  KFDKEESVLRLPLPECWVVSELHVLIDMVTASYDKFFFGDVGREIYDFFWSDFADWYIEA 704

Query: 704  SKARLYQSEGNSMASVAQAVLFYVFENILKMLHPFMPFVTEELWQSLPHRKEALIVSPWP 525
            SKARLYQS  NS  S AQAVL YVF+N+LK+LHPFMPFVTEELWQ+LP  KEALIVSPWP
Sbjct: 705  SKARLYQSGANSACSEAQAVLLYVFKNVLKLLHPFMPFVTEELWQALPDPKEALIVSPWP 764

Query: 524  ETKLPRNLNSIKRFENLQALTRAIRNARAEYSVEPAKRISASIVAKEDVLQYISTEKKVL 345
            +T LPR  NSIK+FEN QALTRAIRNARAEYSVEPAKRISASIVA E+V+QYIS EK+VL
Sbjct: 765  QTSLPRFPNSIKKFENFQALTRAIRNARAEYSVEPAKRISASIVASEEVIQYISNEKEVL 824

Query: 344  ALLCKLDLQNVDFTDSPPG-----------DGKHLVHLVADEGLEAYLPLEDMIDISAEV 198
            ALL +LDLQN+ FTDSPPG           D    VHLVA EGLEAYLPL DM++ISAEV
Sbjct: 825  ALLSRLDLQNIHFTDSPPGMFISQSIFLVWDANQSVHLVASEGLEAYLPLADMVNISAEV 884

Query: 197  QRLSKRLLKMQIEYDALVARLNSEKFVEKAPEKVVLXXXXXXXXXXXKITLTKSRLQLLQ 18
            +RLSKRL KMQ+EYD L ARL+S KFVEKAPE VV            KI LTK+RL  L+
Sbjct: 885  ERLSKRLSKMQVEYDGLAARLSSRKFVEKAPEDVVRGVREKAAEAEEKIKLTKNRLAFLK 944

Query: 17   ST 12
            S+
Sbjct: 945  SS 946


>emb|CBI29095.3| unnamed protein product [Vitis vinifera]
          Length = 963

 Score =  614 bits (1584), Expect = e-173
 Identities = 318/415 (76%), Positives = 346/415 (83%), Gaps = 4/415 (0%)
 Frame = -3

Query: 1244 GHDILFFWVARMVMMGIEFTGTVPFSNVYLHGLIKDSQG----RKMSKTLGNVIDPVDTI 1077
            GHDILFFWVARMVMMGIEFTG VPFS VYLHGLI+DSQ      KMSKTLGNVIDP+DTI
Sbjct: 547  GHDILFFWVARMVMMGIEFTGAVPFSYVYLHGLIRDSQASTMQEKMSKTLGNVIDPIDTI 606

Query: 1076 KEFGTDALRFTLALGTAGQDLNLSMERLSSNKAFTNKLWNAGKFILQNLPSQSDVSAWEN 897
            KEFGTDALRFTLALGTAGQDLNLS ERL+SNKAFTNKLWNAGKF+LQNLPSQSD+SAWE 
Sbjct: 607  KEFGTDALRFTLALGTAGQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDISAWET 666

Query: 896  IIAYKFDXXXXXXXXXXXECWVVSKLHQLIDAVTISYEKYFFGDVGREIYDFFWGDFADW 717
            I+A KFD           ECWVVSKLH LID VT SY+KYFFGDVGRE YDFFWGDFADW
Sbjct: 667  ILACKFDKEEALLRLPLPECWVVSKLHCLIDMVTTSYDKYFFGDVGRETYDFFWGDFADW 726

Query: 716  YIETSKARLYQSEGNSMASVAQAVLFYVFENILKMLHPFMPFVTEELWQSLPHRKEALIV 537
            YIE SKARLY S G+S   VAQAVL YVFENILKMLHPFMPFVTE LWQ+LP+RKEAL+ 
Sbjct: 727  YIEASKARLYHSGGHS---VAQAVLLYVFENILKMLHPFMPFVTEALWQALPNRKEALMN 783

Query: 536  SPWPETKLPRNLNSIKRFENLQALTRAIRNARAEYSVEPAKRISASIVAKEDVLQYISTE 357
            S WP+T LP + +SIK+FENLQ+LTRAIRNARAEYSVEPAKRISASIVA  +V+QYIS E
Sbjct: 784  SSWPQTSLPMHASSIKKFENLQSLTRAIRNARAEYSVEPAKRISASIVAGNEVIQYISKE 843

Query: 356  KKVLALLCKLDLQNVDFTDSPPGDGKHLVHLVADEGLEAYLPLEDMIDISAEVQRLSKRL 177
            K+VLALL +LDLQNV FTDSPPGD    VHLVA EGLEAYLPL DMID+SAEV+RLSKRL
Sbjct: 844  KEVLALLSRLDLQNVHFTDSPPGDANLSVHLVASEGLEAYLPLSDMIDVSAEVERLSKRL 903

Query: 176  LKMQIEYDALVARLNSEKFVEKAPEKVVLXXXXXXXXXXXKITLTKSRLQLLQST 12
             KMQ E+D L ARL+S KFVEKAPE++V            KITLTK+RL  L+ST
Sbjct: 904  SKMQEEFDRLAARLSSPKFVEKAPEEIVSGVREKAAEAEEKITLTKNRLAFLKST 958


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