BLASTX nr result

ID: Coptis21_contig00018812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018812
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18342.3| unnamed protein product [Vitis vinifera]              186   2e-45
emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]   184   8e-45
ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Viti...   183   1e-44
ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thalia...   182   2e-44
dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]        182   2e-44

>emb|CBI18342.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/150 (62%), Positives = 112/150 (74%)
 Frame = -1

Query: 451 KSYHCLQRGVIEPSELLHCLLLPGANHAHLDVQRVALRCLGIFGLLEKKPSEELVKQLRL 272
           KS+  +Q   IEP ELL  LLLPGA H HLDVQ VA RCLG+FGLLE+KPS ELVKQLR 
Sbjct: 142 KSFRWMQGKSIEPDELLQSLLLPGAKHVHLDVQGVATRCLGLFGLLERKPSVELVKQLRF 201

Query: 271 SFVKGPSSVSIMATKALFDLAMWHGPQEIDRAMGQDLLPQPNINKKNFSLIDLSDSNQSL 92
            F+KGPSS+SI+A KAL D  MWHGPQE+DRAMG +L    + NK  FS ++L D N+  
Sbjct: 202 CFIKGPSSISIVACKALIDFGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDW 261

Query: 91  NIELLDLLCAGLDREYWGETVESDENESVQ 2
           N+ELLDLL AGL+   W ++V+ DENESVQ
Sbjct: 262 NVELLDLLYAGLNVNDWIKSVDMDENESVQ 291


>emb|CAN73007.1| hypothetical protein VITISV_040123 [Vitis vinifera]
          Length = 862

 Score =  184 bits (466), Expect = 8e-45
 Identities = 93/150 (62%), Positives = 112/150 (74%)
 Frame = -1

Query: 451 KSYHCLQRGVIEPSELLHCLLLPGANHAHLDVQRVALRCLGIFGLLEKKPSEELVKQLRL 272
           KS+  +Q   IEP ELL  LLLPGA H HL VQRVA RCLG+FGLLE+KPS ELVKQLR 
Sbjct: 530 KSFRWMQGKSIEPDELLQSLLLPGAKHVHLXVQRVATRCLGLFGLLERKPSVELVKQLRF 589

Query: 271 SFVKGPSSVSIMATKALFDLAMWHGPQEIDRAMGQDLLPQPNINKKNFSLIDLSDSNQSL 92
            F+KG SS+SI+A KAL D+ MWHGPQE+DRAMG +L    + NK  FS ++L D N+  
Sbjct: 590 CFIKGXSSISIVACKALIDIGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDW 649

Query: 91  NIELLDLLCAGLDREYWGETVESDENESVQ 2
           N+ELLDLL AGL+   W ++V+ DENESVQ
Sbjct: 650 NVELLDLLYAGLNVNDWIKSVDMDENESVQ 679


>ref|XP_002267656.1| PREDICTED: condensin complex subunit 3 [Vitis vinifera]
           gi|297745068|emb|CBI38660.3| unnamed protein product
           [Vitis vinifera]
          Length = 1036

 Score =  183 bits (465), Expect = 1e-44
 Identities = 93/150 (62%), Positives = 112/150 (74%)
 Frame = -1

Query: 451 KSYHCLQRGVIEPSELLHCLLLPGANHAHLDVQRVALRCLGIFGLLEKKPSEELVKQLRL 272
           KS+  +Q   IEP ELL  LLLPGA H HL VQRVA RCLG+FGLLE+KPS ELVKQLR 
Sbjct: 530 KSFRWMQGKSIEPDELLQSLLLPGAKHVHLAVQRVATRCLGLFGLLERKPSVELVKQLRF 589

Query: 271 SFVKGPSSVSIMATKALFDLAMWHGPQEIDRAMGQDLLPQPNINKKNFSLIDLSDSNQSL 92
            F+KG SS+SI+A KAL D+ MWHGPQE+DRAMG +L    + NK  FS ++L D N+  
Sbjct: 590 CFIKGSSSISIVACKALIDIGMWHGPQEVDRAMGLELSSLLHENKMTFSPVNLCDMNEDW 649

Query: 91  NIELLDLLCAGLDREYWGETVESDENESVQ 2
           N+ELLDLL AGL+   W ++V+ DENESVQ
Sbjct: 650 NVELLDLLYAGLNVNDWIKSVDMDENESVQ 679


>ref|NP_198579.2| condensin complex subunit 3 [Arabidopsis thaliana]
            gi|332006829|gb|AED94212.1| condensin complex subunit 3
            [Arabidopsis thaliana]
          Length = 1051

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/150 (59%), Positives = 113/150 (75%)
 Frame = -1

Query: 451  KSYHCLQRGVIEPSELLHCLLLPGANHAHLDVQRVALRCLGIFGLLEKKPSEELVKQLRL 272
            KS H LQ   IEP E+LH LLLPGA H HLDVQR+A++ LG+FGLLEKKPSEELV+QLR 
Sbjct: 555  KSLHSLQGKAIEPEEILHALLLPGAKHTHLDVQRIAIKGLGLFGLLEKKPSEELVRQLRA 614

Query: 271  SFVKGPSSVSIMATKALFDLAMWHGPQEIDRAMGQDLLPQPNINKKNFSLIDLSDSNQSL 92
            +F + P  +SIMA KAL DL MWH P E+D+AMGQDLL Q   +  +F+ IDLS++ + +
Sbjct: 615  AFCRSPPPISIMACKALVDLGMWHSPTEVDKAMGQDLLSQFEDDSIDFAPIDLSNAEEDM 674

Query: 91   NIELLDLLCAGLDREYWGETVESDENESVQ 2
            N ++LDLL AGL+ + W  + ES ENESV+
Sbjct: 675  NFKMLDLLYAGLESDDWRASTESSENESVK 704


>dbj|BAB08309.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1076

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/150 (59%), Positives = 113/150 (75%)
 Frame = -1

Query: 451  KSYHCLQRGVIEPSELLHCLLLPGANHAHLDVQRVALRCLGIFGLLEKKPSEELVKQLRL 272
            KS H LQ   IEP E+LH LLLPGA H HLDVQR+A++ LG+FGLLEKKPSEELV+QLR 
Sbjct: 580  KSLHSLQGKAIEPEEILHALLLPGAKHTHLDVQRIAIKGLGLFGLLEKKPSEELVRQLRA 639

Query: 271  SFVKGPSSVSIMATKALFDLAMWHGPQEIDRAMGQDLLPQPNINKKNFSLIDLSDSNQSL 92
            +F + P  +SIMA KAL DL MWH P E+D+AMGQDLL Q   +  +F+ IDLS++ + +
Sbjct: 640  AFCRSPPPISIMACKALVDLGMWHSPTEVDKAMGQDLLSQFEDDSIDFAPIDLSNAEEDM 699

Query: 91   NIELLDLLCAGLDREYWGETVESDENESVQ 2
            N ++LDLL AGL+ + W  + ES ENESV+
Sbjct: 700  NFKMLDLLYAGLESDDWRASTESSENESVK 729


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