BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018809
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF98191.1|AC000107_14 F17F8.21 [Arabidopsis thaliana]              73   3e-11
ref|NP_174377.1| F-box domain-containing protein [Arabidopsis th...    69   5e-10
ref|NP_179897.2| F-box protein [Arabidopsis thaliana] gi|1221793...    59   3e-07
gb|AAB87115.1| hypothetical protein [Arabidopsis thaliana]             59   3e-07
gb|AAX23830.1| hypothetical protein At2g31470 [Arabidopsis thali...    59   5e-07

>gb|AAF98191.1|AC000107_14 F17F8.21 [Arabidopsis thaliana]
          Length = 1201

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
 Frame = -3

Query: 410  LSPKSQSRNH*KRKFVSRKKRQGKKEMEFKKEDLFSKLPIDIVLDILSRLPLKTISKCRW 231
            LSP  QS +       S   R  +       E+    +PID++LDILSRLP K+I++CR 
Sbjct: 774  LSPPEQSTSSSSEDPCSLGTRSFRSRTIMNSEENTDSIPIDLILDILSRLPSKSIARCRC 833

Query: 230  VSKTWYSFIQHPPFTQLHFTRTTPIP---CAAFIGGRYSQSYVTDPECFLNSKKRVTAYD 60
            VSK W S I+   FT+L  TR++  P    A    G +    +  P+ +L     V A +
Sbjct: 834  VSKLWESMIRQSYFTELFLTRSSSRPHLLIAVEQEGEWKFFSLPQPKNYLGKSSLVVAAN 893

Query: 59   LELKEFKD 36
            L LK F+D
Sbjct: 894  LHLKFFED 901


>ref|NP_174377.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|125991853|sp|P0C2G2.1|FB21_ARATH RecName:
           Full=Putative F-box protein At1g30920
           gi|332193172|gb|AEE31293.1| F-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 400

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
 Frame = -3

Query: 317 EDLFSKLPIDIVLDILSRLPLKTISKCRWVSKTWYSFIQHPPFTQLHFTRTTPIP---CA 147
           E+    +PID++LDILSRLP K+I++CR VSK W S I+   FT+L  TR++  P    A
Sbjct: 4   EENTDSIPIDLILDILSRLPSKSIARCRCVSKLWESMIRQSYFTELFLTRSSSRPHLLIA 63

Query: 146 AFIGGRYSQSYVTDPECFLNSKKRVTAYDLELKEFKD 36
               G +    +  P+ +L     V A +L LK F+D
Sbjct: 64  VEQEGEWKFFSLPQPKNYLGKSSLVVAANLHLKFFED 100


>ref|NP_179897.2| F-box protein [Arabidopsis thaliana]
           gi|122179305|sp|Q1KS79.1|FB116_ARATH RecName: Full=F-box
           protein At2g23160 gi|93007356|gb|ABE97181.1| F-box
           family protein [Arabidopsis thaliana]
           gi|330252329|gb|AEC07423.1| F-box protein [Arabidopsis
           thaliana]
          Length = 307

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = -3

Query: 305 SKLPIDIVLDILSRLPLKTISKCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAF 141
           S + ID++ +ILSR+P K++++ R VSK W S I+ P FT+L  TR++P PC  F
Sbjct: 5   SPISIDLIAEILSRVPSKSVARFRCVSKPWASMIRRPYFTELFLTRSSPKPCILF 59


>gb|AAB87115.1| hypothetical protein [Arabidopsis thaliana]
          Length = 395

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/55 (47%), Positives = 39/55 (70%)
 Frame = -3

Query: 305 SKLPIDIVLDILSRLPLKTISKCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAF 141
           S + ID++ +ILSR+P K++++ R VSK W S I+ P FT+L  TR++P PC  F
Sbjct: 5   SPISIDLIAEILSRVPSKSVARFRCVSKPWASMIRRPYFTELFLTRSSPKPCILF 59


>gb|AAX23830.1| hypothetical protein At2g31470 [Arabidopsis thaliana]
          Length = 184

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/60 (41%), Positives = 42/60 (70%)
 Frame = -3

Query: 320 KEDLFSKLPIDIVLDILSRLPLKTISKCRWVSKTWYSFIQHPPFTQLHFTRTTPIPCAAF 141
           +++ F  +PID+V++I SR P+K+I++CR VSK W S ++ P FT+L+ T++   P   F
Sbjct: 18  RDENFEPIPIDLVIEIFSRSPVKSIARCRCVSKLWASILRLPYFTELYLTKSCARPRLLF 77