BLASTX nr result
ID: Coptis21_contig00018798
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018798
(261 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygr... 80 2e-13
dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens] 79 3e-13
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 79 3e-13
ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [S... 79 3e-13
ref|XP_001773953.1| predicted protein [Physcomitrella patens sub... 79 3e-13
>gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 79.7 bits (195), Expect = 2e-13
Identities = 41/86 (47%), Positives = 55/86 (63%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ+G +L M +E LEPD TFAS+L GC + A++ GRQ+H LI++S L DV
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
L NALI MY GS+ +A +VF+ L
Sbjct: 623 NLGNALINMYIRCGSLQDAYEVFHSL 648
Score = 68.6 bits (166), Expect = 5e-10
Identities = 32/83 (38%), Positives = 55/83 (66%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQNG G L+ M ++ + + F+F S+L+ C+ A+++G++VH+ I+K ++ DV
Sbjct: 765 AQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDV 824
Query: 182 PLANALITMYASFGSINEAEQVF 250
+ ALI+MYA GS+ EA++VF
Sbjct: 825 RVGAALISMYAKCGSLEEAQEVF 847
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 23 KGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPLANALI 202
+ ++L M E ++P TF LLS C ++ A G+ +H IL+S + ++ LANAL+
Sbjct: 469 EAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALM 528
Query: 203 TMYASFGSINEAEQVFYG 256
MY GSI EA+ VF G
Sbjct: 529 NMYRRCGSIMEAQNVFEG 546
Score = 56.2 bits (134), Expect = 3e-06
Identities = 28/83 (33%), Positives = 44/83 (53%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
A G K EL M + +P TF+S+L C + + +G++V + IL S D
Sbjct: 664 ADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDT 723
Query: 182 PLANALITMYASFGSINEAEQVF 250
+ NALI+ Y+ GS+ +A +VF
Sbjct: 724 GVGNALISAYSKSGSMTDARKVF 746
>dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 79.3 bits (194), Expect = 3e-13
Identities = 41/86 (47%), Positives = 53/86 (61%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ+G +L M E LEPDN TFAS+LSGC + A++ G+Q+H I +S L DV
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
L NALI MY GS+ +A VF+ L
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSL 593
Score = 73.2 bits (178), Expect = 2e-11
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQNG G +E M ++++ P+ F+F SLL+ C+ A+++G++VH+ I+K +L DV
Sbjct: 710 AQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDV 769
Query: 182 PLANALITMYASFGSINEAEQVF 250
+ ALI+MYA GS EA++VF
Sbjct: 770 RVGAALISMYAKCGSQGEAQEVF 792
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 23 KGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPLANALI 202
+ + L M E ++P TF LLS CA++ A G+ +H IL+S + ++ LANAL+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 203 TMYASFGSINEAEQVFYG 256
MY GS+ EA+ VF G
Sbjct: 474 NMYRRCGSLMEAQNVFEG 491
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ+GH + E M + + + T+ S+L+ C+ + A++ G+ +HS I + ++DV
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 182 PLANALITMYASFGSINEAEQVFY 253
+ NALI+MYA G + +A ++FY
Sbjct: 366 QIGNALISMYARCGDLPKARELFY 389
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/83 (34%), Positives = 44/83 (53%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
A G K +EL M E P TF+S+L C + + +G++V + IL S D
Sbjct: 609 ADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDT 668
Query: 182 PLANALITMYASFGSINEAEQVF 250
+ NALI+ Y+ GS+ +A +VF
Sbjct: 669 GVGNALISAYSKSGSMTDAREVF 691
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ G K +L M P+ T+ S+L+ C ++ G+++HS I+K+ D
Sbjct: 104 AQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDP 163
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
+ N+L++MY G + A QVF G+
Sbjct: 164 RVQNSLLSMYGKCGDLPRARQVFAGI 189
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 79.3 bits (194), Expect = 3e-13
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
A G G + L LM QE LEPD FTF S+LS C+ A+ GR+VH ++++ L +
Sbjct: 121 AHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNA 180
Query: 182 PLANALITMYASFGSINEAEQVF 250
+ NALI+MYA GS+ +A +VF
Sbjct: 181 TVGNALISMYAKCGSVRDARRVF 203
Score = 63.9 bits (154), Expect = 1e-08
Identities = 27/83 (32%), Positives = 52/83 (62%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
A++G+ + L+ M+QE + P T+ ++LS C A+++G+Q+H+ I++S +DV
Sbjct: 222 AESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDV 281
Query: 182 PLANALITMYASFGSINEAEQVF 250
++ AL MY G++ +A +VF
Sbjct: 282 RVSTALTKMYIKCGAVKDAREVF 304
Score = 58.9 bits (141), Expect = 4e-07
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +2
Query: 47 MMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPLANALITMYASFGS 226
M++E + PD T+ ++LS CA + G+++H+ +K L +DV NALI MY+ GS
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397
Query: 227 INEAEQVF 250
+ +A QVF
Sbjct: 398 MKDARQVF 405
Score = 55.8 bits (133), Expect = 4e-06
Identities = 22/71 (30%), Positives = 49/71 (69%)
Frame = +2
Query: 47 MMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPLANALITMYASFGS 226
M+Q+ +E + T+ +L C++ +A++ G+++H+ ++K+ + D+ +ANAL++MY GS
Sbjct: 439 MLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGS 498
Query: 227 INEAEQVFYGL 259
+ +A +V G+
Sbjct: 499 VEDAIRVSEGM 509
>ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein
SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 79.3 bits (194), Expect = 3e-13
Identities = 37/86 (43%), Positives = 56/86 (65%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
+Q HG ++L M+++ LEPD+F +SLL+ CA A +QG+QVH+ ++K + T+DV
Sbjct: 483 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKRQFTSDV 542
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
NAL+ YA GSI +A+ F GL
Sbjct: 543 FAGNALVYTYAKCGSIEDADMAFSGL 568
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/81 (38%), Positives = 48/81 (59%)
Frame = +2
Query: 8 NGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPL 187
+GH H+ LELL M + P+ FT +S+L CA A GRQ+H ++K+ +D +
Sbjct: 281 HGHDHRALELLLQMKPLGVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFV 340
Query: 188 ANALITMYASFGSINEAEQVF 250
A L+ MYA G +++A +VF
Sbjct: 341 AVGLVDMYAKDGFLDDARKVF 361
>ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein
[Physcomitrella patens subsp. patens]
Length = 905
Score = 79.3 bits (194), Expect = 3e-13
Identities = 41/86 (47%), Positives = 53/86 (61%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ+G +L M E LEPDN TFAS+LSGC + A++ G+Q+H I +S L DV
Sbjct: 508 AQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDV 567
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
L NALI MY GS+ +A VF+ L
Sbjct: 568 NLGNALINMYIRCGSLQDARNVFHSL 593
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/78 (39%), Positives = 46/78 (58%)
Frame = +2
Query: 23 KGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDVPLANALI 202
+ + L M E ++P TF LLS CA++ A G+ +H IL+S + ++ LANAL+
Sbjct: 414 EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALM 473
Query: 203 TMYASFGSINEAEQVFYG 256
MY GS+ EA+ VF G
Sbjct: 474 NMYRRCGSLMEAQNVFEG 491
Score = 59.7 bits (143), Expect = 2e-07
Identities = 28/84 (33%), Positives = 51/84 (60%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ+GH + E M + + + T+ S+L+ C+ + A++ G+ +HS I + ++DV
Sbjct: 306 AQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDV 365
Query: 182 PLANALITMYASFGSINEAEQVFY 253
+ NALI+MYA G + +A ++FY
Sbjct: 366 QIGNALISMYARCGDLPKARELFY 389
Score = 56.6 bits (135), Expect = 2e-06
Identities = 27/86 (31%), Positives = 45/86 (52%)
Frame = +2
Query: 2 AQNGHGHKGLELLCLMMQENLEPDNFTFASLLSGCADTMAVQQGRQVHSLILKSRLTTDV 181
AQ G K +L M P+ T+ S+L+ C ++ G+++HS I+K+ D
Sbjct: 104 AQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDP 163
Query: 182 PLANALITMYASFGSINEAEQVFYGL 259
+ N+L++MY G + A QVF G+
Sbjct: 164 RVQNSLLSMYGKCGDLPRARQVFAGI 189