BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018786
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...    59   3e-07
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...    57   2e-06
emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]    57   2e-06
ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus ...    56   3e-06
gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [...    55   5e-06

>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/39 (74%), Positives = 32/39 (82%), Gaps = 3/39 (7%)
 Frame = -2

Query: 110 PTPSSSSAEKRWPG---DSVFRLVVPVLKVGSIIGRKGE 3
           PTP  ++AEKRWPG     VFRL+VPVLKVGSIIGRKGE
Sbjct: 28  PTPDPAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGE 66


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
           vinifera]
          Length = 466

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 110 PTPSSSSAEKRWPGDSVFRLVVPVLKVGSIIGRKGE 3
           P P+S      WPGD VFRL+VPVLKVGSIIGRKGE
Sbjct: 63  PAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGE 98


>emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
          Length = 473

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -2

Query: 110 PTPSSSSAEKRWPGDSVFRLVVPVLKVGSIIGRKGE 3
           P P+S      WPGD VFRL+VPVLKVGSIIGRKGE
Sbjct: 63  PAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGE 98


>ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 451

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = -2

Query: 125 IKHRRPTPSSSSAEKRWPGDSVFRLVVPVLKVGSIIGRKGE 3
           +++  P+ S+S+    WPGD VFRL+VPVLKVGSIIGRKG+
Sbjct: 41  VENPEPSASTSANWPGWPGDCVFRLIVPVLKVGSIIGRKGD 81


>gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
           gi|31433543|gb|AAP55041.1| KH domain-containing protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|125532979|gb|EAY79544.1| hypothetical protein
           OsI_34673 [Oryza sativa Indica Group]
           gi|125575714|gb|EAZ16998.1| hypothetical protein
           OsJ_32483 [Oryza sativa Japonica Group]
           gi|215769329|dbj|BAH01558.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 458

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/36 (77%), Positives = 31/36 (86%), Gaps = 3/36 (8%)
 Frame = -2

Query: 101 SSSSAEKRWPG---DSVFRLVVPVLKVGSIIGRKGE 3
           + ++A KRWPG   DSVFRLVVPVLKVGSIIGRKGE
Sbjct: 41  AEAAAAKRWPGWPGDSVFRLVVPVLKVGSIIGRKGE 76