BLASTX nr result
ID: Coptis21_contig00018784
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00018784 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]... 63 3e-08 ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223... 61 8e-08 dbj|BAH03478.1| syntaxin [Nicotiana tabacum] 59 3e-07 ref|XP_004158729.1| PREDICTED: syntaxin-43-like [Cucumis sativus] 59 5e-07 ref|XP_004144767.1| PREDICTED: syntaxin-43-like [Cucumis sativus] 59 5e-07 >ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera] gi|296089745|emb|CBI39564.3| unnamed protein product [Vitis vinifera] Length = 327 Score = 62.8 bits (151), Expect = 3e-08 Identities = 37/69 (53%), Positives = 42/69 (60%), Gaps = 8/69 (11%) Frame = -3 Query: 185 MATRNRTHLYRKYRDALKSVRVP--------TXXXXXXXXXXXXIEMSSMFPQKRSYVPL 30 MA+RNRT LYRKYRDALKSVRVP T + +S+ RSYVPL Sbjct: 1 MASRNRTLLYRKYRDALKSVRVPVSSSLSSSTPSTSSGGGPVIELVSTSLLNPNRSYVPL 60 Query: 29 STEDPGSSS 3 STEDPG+SS Sbjct: 61 STEDPGNSS 69 >ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223548442|gb|EEF49933.1| syntaxin, putative [Ricinus communis] Length = 323 Score = 61.2 bits (147), Expect = 8e-08 Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 4/65 (6%) Frame = -3 Query: 185 MATRNRTHLYRKYRDALKSVRVP----TXXXXXXXXXXXXIEMSSMFPQKRSYVPLSTED 18 MA+RNRT L+RKYRDALKSVRVP T +S+ Q RSY PLS ED Sbjct: 1 MASRNRTFLFRKYRDALKSVRVPSTQSTTTSTSSVSGPVIELVSTSLLQNRSYAPLSAED 60 Query: 17 PGSSS 3 PG+SS Sbjct: 61 PGNSS 65 >dbj|BAH03478.1| syntaxin [Nicotiana tabacum] Length = 324 Score = 59.3 bits (142), Expect = 3e-07 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 5/66 (7%) Frame = -3 Query: 185 MATRNRTHLYRKYRDALKSVRVPTXXXXXXXXXXXXIEM-----SSMFPQKRSYVPLSTE 21 MA+RNRT L+RKYRDAL+SVRVP + +S+ RSY PLSTE Sbjct: 1 MASRNRTILFRKYRDALRSVRVPAGSSPSTSSGHGSGPVIELATTSLLNSNRSYAPLSTE 60 Query: 20 DPGSSS 3 DPG+SS Sbjct: 61 DPGTSS 66 >ref|XP_004158729.1| PREDICTED: syntaxin-43-like [Cucumis sativus] Length = 329 Score = 58.5 bits (140), Expect = 5e-07 Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 9/70 (12%) Frame = -3 Query: 185 MATRNRTHLYRKYRDALKSVRVPTXXXXXXXXXXXXIE---------MSSMFPQKRSYVP 33 MA+RNRT L++KYRDAL+SVRVPT SS+ RSY P Sbjct: 1 MASRNRTLLFKKYRDALRSVRVPTSSSPAFASPSTSSAGGGPVIELVSSSLLHPNRSYAP 60 Query: 32 LSTEDPGSSS 3 LSTEDPG+SS Sbjct: 61 LSTEDPGNSS 70 >ref|XP_004144767.1| PREDICTED: syntaxin-43-like [Cucumis sativus] Length = 329 Score = 58.5 bits (140), Expect = 5e-07 Identities = 34/70 (48%), Positives = 40/70 (57%), Gaps = 9/70 (12%) Frame = -3 Query: 185 MATRNRTHLYRKYRDALKSVRVPTXXXXXXXXXXXXIE---------MSSMFPQKRSYVP 33 MA+RNRT L++KYRDAL+SVRVPT SS+ RSY P Sbjct: 1 MASRNRTLLFKKYRDALRSVRVPTSSSPAFASPSTSSAGGGPVIELVSSSLLHPNRSYAP 60 Query: 32 LSTEDPGSSS 3 LSTEDPG+SS Sbjct: 61 LSTEDPGNSS 70