BLASTX nr result

ID: Coptis21_contig00018778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018778
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48881.1| unknown [Medicago truncatula]                           58   9e-07
ref|NP_174536.1| putative plastid developmental protein DAG [Ara...    57   1e-06
ref|NP_181067.1| putative plastid developmental protein DAG [Ara...    57   1e-06
ref|NP_001056622.1| Os06g0116600 [Oryza sativa Japonica Group] g...    57   1e-06
dbj|BAC22214.1| putative plastid protein [Oryza sativa Japonica ...    57   1e-06

>gb|AFK48881.1| unknown [Medicago truncatula]
          Length = 217

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +3

Query: 6   QEVNKKIYRIVCENHFVGFGTKIEAEVSNNLKGMPGVLAVLPDSLIN 146
           +E  KKIY + CE +F GFG +I+ E SN L+G+PGVL VLPDS ++
Sbjct: 118 EEAKKKIYNVSCERYF-GFGCEIDGETSNKLEGLPGVLFVLPDSYVD 163


>ref|NP_174536.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|12322451|gb|AAG51246.1|AC055769_5 plastid protein,
           putative; 23108-24430 [Arabidopsis thaliana]
           gi|17381078|gb|AAL36351.1| putative plastid protein
           [Arabidopsis thaliana] gi|20465721|gb|AAM20329.1|
           putative plastid protein [Arabidopsis thaliana]
           gi|332193385|gb|AEE31506.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 229

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/51 (50%), Positives = 36/51 (70%)
 Frame = +3

Query: 6   QEVNKKIYRIVCENHFVGFGTKIEAEVSNNLKGMPGVLAVLPDSLINNCRK 158
           +E  KKIY + CE +F GFG +I+ E SN L+G+PGVL +LPDS ++   K
Sbjct: 129 EEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFILPDSYVDQENK 178


>ref|NP_181067.1| putative plastid developmental protein DAG [Arabidopsis thaliana]
           gi|3668082|gb|AAC61814.1| unknown protein [Arabidopsis
           thaliana] gi|18253009|gb|AAL62431.1| unknown protein
           [Arabidopsis thaliana] gi|28059631|gb|AAO30077.1|
           unknown protein [Arabidopsis thaliana]
           gi|330253991|gb|AEC09085.1| putative plastid
           developmental protein DAG [Arabidopsis thaliana]
          Length = 232

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +3

Query: 6   QEVNKKIYRIVCENHFVGFGTKIEAEVSNNLKGMPGVLAVLPDSLIN 146
           +E  KKIY + CE +F GFG +I+ E SN L+G+PGVL VLPDS ++
Sbjct: 132 EEARKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLPDSYVD 177


>ref|NP_001056622.1| Os06g0116600 [Oryza sativa Japonica Group]
           gi|55296199|dbj|BAD67917.1| putative DAL1 protein [Oryza
           sativa Japonica Group] gi|113594662|dbj|BAF18536.1|
           Os06g0116600 [Oryza sativa Japonica Group]
           gi|218197457|gb|EEC79884.1| hypothetical protein
           OsI_21391 [Oryza sativa Indica Group]
           gi|222634859|gb|EEE64991.1| hypothetical protein
           OsJ_19911 [Oryza sativa Japonica Group]
          Length = 165

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +3

Query: 6   QEVNKKIYRIVCENHFVGFGTKIEAEVSNNLKGMPGVLAVLPDSLIN 146
           +E  KKIY + CE +F GFG +I+ E SN L+G+PGVL VLPDS ++
Sbjct: 66  EEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLPDSYVD 111


>dbj|BAC22214.1| putative plastid protein [Oryza sativa Japonica Group]
          Length = 227

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +3

Query: 6   QEVNKKIYRIVCENHFVGFGTKIEAEVSNNLKGMPGVLAVLPDSLIN 146
           +E  KKIY + CE +F GFG +I+ E SN L+G+PGVL VLPDS ++
Sbjct: 128 EEAKKKIYNVSCERYF-GFGCEIDEETSNKLEGLPGVLFVLPDSYVD 173


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