BLASTX nr result

ID: Coptis21_contig00018775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018775
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216...   170   1e-40
ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262...   167   1e-39
ref|XP_002516840.1| serine/arginine rich splicing factor, putati...   167   1e-39
ref|XP_002312718.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
gb|ACU20250.1| unknown [Glycine max]                                  162   2e-38

>ref|XP_004134179.1| PREDICTED: uncharacterized protein LOC101216537 [Cucumis sativus]
           gi|449495419|ref|XP_004159835.1| PREDICTED:
           uncharacterized LOC101216537 [Cucumis sativus]
          Length = 248

 Score =  170 bits (430), Expect = 1e-40
 Identities = 80/93 (86%), Positives = 88/93 (94%)
 Frame = +1

Query: 169 PSGLLIRNISLDARPEDLRIPFERFGQVKDVYLPKNYYTGEPRGFGFVKFHSAEDAAEAK 348
           PSGLL+RN+ LDARPEDLRIPFERFG VKDVYLPKNYYTGEPRGFGFVKF  AEDAAEAK
Sbjct: 49  PSGLLVRNLPLDARPEDLRIPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRFAEDAAEAK 108

Query: 349 ERMDHKIIGGREIRIVFAEENRKTPQEMRVTTR 447
           ++++H +IGGREIRIVFAEENRKTPQEMRVT+R
Sbjct: 109 QQLNHTVIGGREIRIVFAEENRKTPQEMRVTSR 141


>ref|XP_002265951.1| PREDICTED: uncharacterized protein LOC100262434 [Vitis vinifera]
           gi|298205010|emb|CBI34317.3| unnamed protein product
           [Vitis vinifera]
          Length = 287

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/94 (81%), Positives = 86/94 (91%)
 Frame = +1

Query: 169 PSGLLIRNISLDARPEDLRIPFERFGQVKDVYLPKNYYTGEPRGFGFVKFHSAEDAAEAK 348
           PSGLL+RNI+LDARPEDLR+PFERFG VKDVYLPKNYYTGEPRGFGFVKF +AEDAAEAK
Sbjct: 43  PSGLLVRNIALDARPEDLRVPFERFGPVKDVYLPKNYYTGEPRGFGFVKFRNAEDAAEAK 102

Query: 349 ERMDHKIIGGREIRIVFAEENRKTPQEMRVTTRI 450
             ++H +IGGREI IVFAEENRKTPQEMR  +R+
Sbjct: 103 HHLNHSVIGGREIAIVFAEENRKTPQEMRTNSRV 136


>ref|XP_002516840.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223543928|gb|EEF45454.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/94 (82%), Positives = 87/94 (92%)
 Frame = +1

Query: 169 PSGLLIRNISLDARPEDLRIPFERFGQVKDVYLPKNYYTGEPRGFGFVKFHSAEDAAEAK 348
           PSGLL+RN+ LDARPEDLR PFE++G VKDVYLPKNYYTGEPRGFGFVK+  AEDAAEAK
Sbjct: 51  PSGLLVRNLPLDARPEDLRGPFEKYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAK 110

Query: 349 ERMDHKIIGGREIRIVFAEENRKTPQEMRVTTRI 450
           +RM+HKIIGGREIRIV+AEENRKTPQEMR T R+
Sbjct: 111 QRMNHKIIGGREIRIVYAEENRKTPQEMRTTARV 144


>ref|XP_002312718.1| predicted protein [Populus trichocarpa] gi|222852538|gb|EEE90085.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/94 (81%), Positives = 85/94 (90%)
 Frame = +1

Query: 169 PSGLLIRNISLDARPEDLRIPFERFGQVKDVYLPKNYYTGEPRGFGFVKFHSAEDAAEAK 348
           PSGLLIRN+ LDARPEDLR  FE+FG +KD+YLPKNYYTGEPRGFGFVK+  +EDAAEAK
Sbjct: 39  PSGLLIRNLPLDARPEDLRRSFEKFGPLKDIYLPKNYYTGEPRGFGFVKYRHSEDAAEAK 98

Query: 349 ERMDHKIIGGREIRIVFAEENRKTPQEMRVTTRI 450
           +RMDHK IGGREIRIVFAEENRKTPQEMR TT +
Sbjct: 99  QRMDHKTIGGREIRIVFAEENRKTPQEMRRTTHV 132


>gb|ACU20250.1| unknown [Glycine max]
          Length = 270

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/93 (82%), Positives = 84/93 (90%)
 Frame = +1

Query: 169 PSGLLIRNISLDARPEDLRIPFERFGQVKDVYLPKNYYTGEPRGFGFVKFHSAEDAAEAK 348
           PSGLL+RN+ LDARPEDLRIPFER+G VKDVYLPKNYYTGEPRGFGFVK+   EDAAEAK
Sbjct: 48  PSGLLVRNLPLDARPEDLRIPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYGEDAAEAK 107

Query: 349 ERMDHKIIGGREIRIVFAEENRKTPQEMRVTTR 447
           + ++H IIGGREIRIVFAEENRKT QEMRV TR
Sbjct: 108 QHLNHTIIGGREIRIVFAEENRKTSQEMRVNTR 140


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