BLASTX nr result

ID: Coptis21_contig00018772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018772
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...   288   2e-75
ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycin...   286   6e-75
ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Gl...   286   1e-74
ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|2...   285   2e-74
ref|XP_002263780.1| PREDICTED: PXMP2/4 family protein 4 [Vitis v...   283   5e-74

>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  288 bits (737), Expect = 2e-75
 Identities = 133/174 (76%), Positives = 157/174 (90%)
 Frame = -3

Query: 961 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQAITGSSSDSFDLIRTSRMAGYGML 782
           K GFIGWYLGM++SRPILTKS TSSLIY  ADLSSQ I+  SS+ +DL+RT RMAGYG+L
Sbjct: 11  KIGFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQTISLPSSEPYDLVRTLRMAGYGLL 70

Query: 781 VMGPSMHFWFNFVSKVLPKRDVVNTLKKLFMGQTIYGPIMTTIFFSVNAGLQGENGAEII 602
           ++GPS+HFWF FVSK+LPKRD++ T KK+ MGQTIYGPIMT +FFS+NA LQGEN AEII
Sbjct: 71  IVGPSLHFWFKFVSKLLPKRDLITTFKKILMGQTIYGPIMTVVFFSLNARLQGENSAEII 130

Query: 601 ARLKRDLLPTLINGLMYWPICDFVTFKFIPVRLQPLVSNSFAYLWTIYITYMAT 440
           ARLKRDL+PT+ING+MYWP+CDFVTFKFIPV LQPLVSNSF+YLWT+Y+TYMA+
Sbjct: 131 ARLKRDLVPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMTYMAS 184


>ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycine max]
           gi|255639865|gb|ACU20225.1| unknown [Glycine max]
          Length = 248

 Score =  286 bits (733), Expect = 6e-75
 Identities = 131/178 (73%), Positives = 157/178 (88%)
 Frame = -3

Query: 961 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQAITGSSSDSFDLIRTSRMAGYGML 782
           K GF+GWYLGM++S PILTKS+TSSLIY   DLSSQ I   SS+ FD IRTSRMAGYGM+
Sbjct: 70  KVGFVGWYLGMIKSWPILTKSVTSSLIYIATDLSSQTIVRESSEPFDFIRTSRMAGYGMV 129

Query: 781 VMGPSMHFWFNFVSKVLPKRDVVNTLKKLFMGQTIYGPIMTTIFFSVNAGLQGENGAEII 602
           ++GPS+HFWFNFVSK+ P+RD+ +TLKK+ MGQT+YGP MT  FFS+NA LQGE G+EI 
Sbjct: 130 ILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVTFFSLNARLQGETGSEIA 189

Query: 601 ARLKRDLLPTLINGLMYWPICDFVTFKFIPVRLQPLVSNSFAYLWTIYITYMATLEKA 428
           ARLKRDLLPT+++G+MYWPICDF+TF+FIPV LQPLVSNSF+YLWT+YITYMA+LEKA
Sbjct: 190 ARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYITYMASLEKA 247


>ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Glycine max]
          Length = 250

 Score =  286 bits (731), Expect = 1e-74
 Identities = 130/178 (73%), Positives = 158/178 (88%)
 Frame = -3

Query: 961 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQAITGSSSDSFDLIRTSRMAGYGML 782
           K GF+ WYLGM++S PILTKS+TSSLIY  ADLSSQ I   SS+ FD +RTSRMAGYG++
Sbjct: 72  KVGFVSWYLGMIKSWPILTKSVTSSLIYIAADLSSQTIVRESSEPFDFVRTSRMAGYGIV 131

Query: 781 VMGPSMHFWFNFVSKVLPKRDVVNTLKKLFMGQTIYGPIMTTIFFSVNAGLQGENGAEII 602
           ++GPS+HFWFNFVSK+ P+RD+ +TLKK+ MGQT+YGP MT IFFS+NA LQGE G+EI 
Sbjct: 132 ILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVIFFSLNARLQGETGSEIA 191

Query: 601 ARLKRDLLPTLINGLMYWPICDFVTFKFIPVRLQPLVSNSFAYLWTIYITYMATLEKA 428
           ARLKRDLLPT+++G+MYWPICDF+TF+FIPV LQPLVSNSF+YLWT+YITYMA+LEKA
Sbjct: 192 ARLKRDLLPTMLSGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYITYMASLEKA 249


>ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  285 bits (729), Expect = 2e-74
 Identities = 130/174 (74%), Positives = 156/174 (89%)
 Frame = -3

Query: 961 KNGFIGWYLGMLESRPILTKSITSSLIYTFADLSSQAITGSSSDSFDLIRTSRMAGYGML 782
           K GF+GWYLGM++SRP+LTKS TSSLIY  ADLSSQ ++  SS+++DL+R  RMAGYG+L
Sbjct: 11  KFGFVGWYLGMVKSRPVLTKSATSSLIYIAADLSSQTMSLPSSEAYDLVRILRMAGYGLL 70

Query: 781 VMGPSMHFWFNFVSKVLPKRDVVNTLKKLFMGQTIYGPIMTTIFFSVNAGLQGENGAEII 602
           ++GPS+HFWFNFVSK+ PKRD++ T KK+ MGQTIYGPIMT +FFS NA LQGEN AEII
Sbjct: 71  IIGPSLHFWFNFVSKLFPKRDLITTFKKIIMGQTIYGPIMTVVFFSSNACLQGENSAEII 130

Query: 601 ARLKRDLLPTLINGLMYWPICDFVTFKFIPVRLQPLVSNSFAYLWTIYITYMAT 440
           ARLKRDLLPT+ING+MYWP+CDFVTFKFIPV LQPLVSNSF+YLWT+Y+TYMA+
Sbjct: 131 ARLKRDLLPTMINGVMYWPVCDFVTFKFIPVHLQPLVSNSFSYLWTVYMTYMAS 184


>ref|XP_002263780.1| PREDICTED: PXMP2/4 family protein 4 [Vitis vinifera]
           gi|296083072|emb|CBI22476.3| unnamed protein product
           [Vitis vinifera]
          Length = 250

 Score =  283 bits (725), Expect = 5e-74
 Identities = 126/177 (71%), Positives = 158/177 (89%)
 Frame = -3

Query: 955 GFIGWYLGMLESRPILTKSITSSLIYTFADLSSQAITGSSSDSFDLIRTSRMAGYGMLVM 776
           GF+ WYLG+++SRP+LTKS+TSSLIY  AD +SQ I+  S++ +D +RT RMAGYGML++
Sbjct: 72  GFVAWYLGLVQSRPLLTKSVTSSLIYAAADCTSQTISRQSTEPYDFMRTLRMAGYGMLIL 131

Query: 775 GPSMHFWFNFVSKVLPKRDVVNTLKKLFMGQTIYGPIMTTIFFSVNAGLQGENGAEIIAR 596
           GPS+HFWFNF+SKVLP+RD++ TLKK+ +GQT +GP MT IFFS NA +QGENG++IIAR
Sbjct: 132 GPSLHFWFNFMSKVLPQRDLITTLKKICLGQTTFGPFMTAIFFSANAAVQGENGSDIIAR 191

Query: 595 LKRDLLPTLINGLMYWPICDFVTFKFIPVRLQPLVSNSFAYLWTIYITYMATLEKAD 425
           L RDL+PTLING+MYWP+CDFVTFKFIPV LQPLVSNSF+YLWTIY+TYMA+LE+AD
Sbjct: 192 LNRDLIPTLINGVMYWPLCDFVTFKFIPVHLQPLVSNSFSYLWTIYMTYMASLERAD 248


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