BLASTX nr result

ID: Coptis21_contig00018767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018767
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32833.3| unnamed protein product [Vitis vinifera]              109   2e-22
emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]   109   2e-22
ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]...   100   2e-19
ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/108 (54%), Positives = 68/108 (62%), Gaps = 9/108 (8%)
 Frame = +3

Query: 3   LYMPHVPQSLIDFLNNPMYTFVGVEIEKDVKKLLLDHNLRVANTVDLRSLA--------- 155
           LY P +P SLIDFL +  YTFVGV I+ D +KLL DHNLRV N VDL  LA         
Sbjct: 89  LYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTREL 148

Query: 156 EGKGLKTLATEVVGLVIEKRKMVSWSTWDDKWLSDDQISYACADAFAS 299
              G+K LA EV+G  +EK K V+ S WD  WLSD Q+ YAC DAF S
Sbjct: 149 RNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHYACVDAFVS 196


>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/108 (54%), Positives = 68/108 (62%), Gaps = 9/108 (8%)
 Frame = +3

Query: 3   LYMPHVPQSLIDFLNNPMYTFVGVEIEKDVKKLLLDHNLRVANTVDLRSLA--------- 155
           LY P +P SLIDFL +  YTFVGV I+ D +KLL DHNLRV N VDL  LA         
Sbjct: 89  LYAPEIPTSLIDFLGDTDYTFVGVGIQADSQKLLNDHNLRVGNVVDLAVLAARVLNTREL 148

Query: 156 EGKGLKTLATEVVGLVIEKRKMVSWSTWDDKWLSDDQISYACADAFAS 299
              G+K LA EV+G  +EK K V+ S WD  WLSD Q+ YAC DAF S
Sbjct: 149 RNAGIKRLAREVLGREVEKPKHVARSRWDTDWLSDAQVHYACVDAFVS 196


>ref|XP_002323207.1| predicted protein [Populus trichocarpa] gi|222867837|gb|EEF04968.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  100 bits (249), Expect = 1e-19
 Identities = 55/103 (53%), Positives = 66/103 (64%), Gaps = 9/103 (8%)
 Frame = +3

Query: 18  VPQSLIDFLNNPMYTFVGVEIEKDVKKLLLDHNLRVANTVDLRSLAEGK---------GL 170
           +PQSL DFL++  YTFVGV IE DVKKL  D+ L V N VDLR LA  K         G+
Sbjct: 103 IPQSLHDFLSDMTYTFVGVGIEGDVKKLTEDYELSVGNAVDLRGLAAEKLGDSRWKNSGV 162

Query: 171 KTLATEVVGLVIEKRKMVSWSTWDDKWLSDDQISYACADAFAS 299
           K LA EV+G  IEK K ++ S WD+ WL+  Q+ YAC DAF S
Sbjct: 163 KRLAREVLGKEIEKPKRITLSRWDNPWLTPAQVQYACLDAFLS 205


>ref|XP_002527682.1| 3-5 exonuclease, putative [Ricinus communis]
           gi|223532913|gb|EEF34681.1| 3-5 exonuclease, putative
           [Ricinus communis]
          Length = 211

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 50/106 (47%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
 Frame = +3

Query: 3   LYMPHVPQSLIDFLNNPMYTFVGVEIEKDVKKLLLDHNLRVANTVDLRSLA--------- 155
           ++ P +PQSL DFL N  Y F GV IE DV+KL+ D+ L V N ++LR +A         
Sbjct: 92  IHSPRIPQSLFDFLKNSSYVFAGVGIESDVEKLVEDYGLSVGNVMELRRVAAESLGVKEL 151

Query: 156 EGKGLKTLATEVVGLVIEKRKMVSWSTWDDKWLSDDQISYACADAF 293
           +  GLK L  +V+G  I+K K V+ S WD  WLS DQ+ YAC DAF
Sbjct: 152 KNAGLKELVKQVLGKEIQKPKRVTMSRWDSMWLSHDQVQYACLDAF 197


>ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|222854828|gb|EEE92375.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 9/101 (8%)
 Frame = +3

Query: 18  VPQSLIDFLNNPMYTFVGVEIEKDVKKLLLDHNLRVANTVDLRSLAEGK---------GL 170
           +PQSL DFL+N  YTFVGV IE DV+KL+  +++ + N VDLR LA  K         G+
Sbjct: 103 IPQSLYDFLSNKNYTFVGVGIEGDVEKLVEGYDVSMGNAVDLRVLAAEKLGAEQWKNSGI 162

Query: 171 KTLATEVVGLVIEKRKMVSWSTWDDKWLSDDQISYACADAF 293
           K+L  E++G  IEK K V+ S WD++WL+ DQ+ YAC DAF
Sbjct: 163 KSLVKEILGKQIEKPKRVTMSRWDNEWLTGDQVQYACLDAF 203


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