BLASTX nr result

ID: Coptis21_contig00018759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018759
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...   134   8e-30
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]   134   8e-30
ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...   121   7e-26
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|XP_003535105.1| PREDICTED: uncharacterized protein LOC100806...   112   2e-23

>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = -2

Query: 263 SCATKVFEDSKDNENAESVRKFECHYCCRTFPTSQALGGHLNAHKRERQHAKRAHLQSTL 84
           S  T + ED KD+EN ES R+FECHYCCR FPTSQALGGH NAHKRERQHAKRAHLQS +
Sbjct: 53  SVETNMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAM 112

Query: 83  AHNSIHDGHMYGLVNYRLGTA 21
            H+ + D HMYGLVNYRLG+A
Sbjct: 113 VHSGLSDAHMYGLVNYRLGSA 133


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/81 (74%), Positives = 67/81 (82%)
 Frame = -2

Query: 263 SCATKVFEDSKDNENAESVRKFECHYCCRTFPTSQALGGHLNAHKRERQHAKRAHLQSTL 84
           S  T + ED KD+EN ES R+FECHYCCR FPTSQALGGH NAHKRERQHAKRAHLQS +
Sbjct: 85  SVETNMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAM 144

Query: 83  AHNSIHDGHMYGLVNYRLGTA 21
            H+ + D HMYGLVNYRLG+A
Sbjct: 145 VHSGLSDAHMYGLVNYRLGSA 165


>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  121 bits (303), Expect = 7e-26
 Identities = 49/73 (67%), Positives = 64/73 (87%)
 Frame = -2

Query: 242 EDSKDNENAESVRKFECHYCCRTFPTSQALGGHLNAHKRERQHAKRAHLQSTLAHNSIHD 63
           +++K++E+ ++ R+FECHYCCR FPTSQALGGH NAHKRERQHAKRAHLQS + HNS  D
Sbjct: 59  DNTKESESGDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSD 118

Query: 62  GHMYGLVNYRLGT 24
            H+YG++NYR+G+
Sbjct: 119 AHIYGMMNYRIGS 131


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  120 bits (300), Expect = 2e-25
 Identities = 53/78 (67%), Positives = 65/78 (83%), Gaps = 3/78 (3%)
 Frame = -2

Query: 236 SKDNENAESVRKFECHYCCRTFPTSQALGGHLNAHKRERQHAKRAHLQSTLAHNSIHDGH 57
           +K+NE++++ R+FECHYCCR FPTSQALGGH NAHKRERQHAKRAHLQS + HNS+ D H
Sbjct: 62  AKENESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMIHNSLSDAH 121

Query: 56  MYGLVNYR---LGTAAPT 12
            YG++NYR   + TAA T
Sbjct: 122 YYGILNYRIDSISTAAMT 139


>ref|XP_003535105.1| PREDICTED: uncharacterized protein LOC100806594 [Glycine max]
          Length = 269

 Score =  112 bits (281), Expect = 2e-23
 Identities = 51/72 (70%), Positives = 57/72 (79%), Gaps = 2/72 (2%)
 Frame = -2

Query: 221 NAESVRKFECHYCCRTFPTSQALGGHLNAHKRERQHAKRAHLQSTLAHNSIHDG--HMYG 48
           N ES R+FECHYCCR FPTSQALGGH NAHKRERQHAKRAHLQST+ H S      H+Y 
Sbjct: 79  NGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTFSDAHHVYN 138

Query: 47  LVNYRLGTAAPT 12
           L+NYR G++ PT
Sbjct: 139 LMNYRYGSSIPT 150


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