BLASTX nr result

ID: Coptis21_contig00018723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018723
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281168.1| PREDICTED: ABC transporter I family member 2...   257   8e-67
emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]   257   8e-67
ref|XP_003633613.1| PREDICTED: ABC transporter I family member 2...   247   6e-64
ref|XP_002308160.1| ABC transporter family protein [Populus tric...   247   8e-64
ref|XP_003536037.1| PREDICTED: ABC transporter I family member 2...   244   4e-63

>ref|XP_002281168.1| PREDICTED: ABC transporter I family member 20 isoform 1 [Vitis
           vinifera] gi|296089817|emb|CBI39636.3| unnamed protein
           product [Vitis vinifera]
          Length = 329

 Score =  257 bits (656), Expect = 8e-67
 Identities = 131/173 (75%), Positives = 141/173 (81%)
 Frame = -2

Query: 519 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI 340
           AEKMIFGVSGIDPQRRAELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEI
Sbjct: 121 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEI 180

Query: 339 TXXXXXXXXXXXLNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 160
           T           L FL+KEC+ERGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+K
Sbjct: 181 TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEK 240

Query: 159 VKEISNLSLMRTVECWLXXXXXXXXXXXXXXKASGLSEFKDQIDGSRVIGGPA 1
           V+E+SNLSLMRTVE WL              KA GL EF+ Q++GSRV G PA
Sbjct: 241 VREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPA 293


>emb|CAN66319.1| hypothetical protein VITISV_040623 [Vitis vinifera]
          Length = 329

 Score =  257 bits (656), Expect = 8e-67
 Identities = 131/173 (75%), Positives = 141/173 (81%)
 Frame = -2

Query: 519 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI 340
           AEKMIFGVSGIDPQRRAELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEI
Sbjct: 121 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEI 180

Query: 339 TXXXXXXXXXXXLNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 160
           T           L FL+KEC+ERGATIIYATHIFDGLENWPSH+VYVAHGKLQLAMPM+K
Sbjct: 181 TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVYVAHGKLQLAMPMEK 240

Query: 159 VKEISNLSLMRTVECWLXXXXXXXXXXXXXXKASGLSEFKDQIDGSRVIGGPA 1
           V+E+SNLSLMRTVE WL              KA GL EF+ Q++GSRV G PA
Sbjct: 241 VREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGSRVAGDPA 293


>ref|XP_003633613.1| PREDICTED: ABC transporter I family member 20 isoform 2 [Vitis
           vinifera]
          Length = 343

 Score =  247 bits (631), Expect = 6e-64
 Identities = 131/187 (70%), Positives = 141/187 (75%), Gaps = 14/187 (7%)
 Frame = -2

Query: 519 AEKMIFGVSGIDPQRRAELIKV--------------LDIDLSWRMHKVSDGQRRRVQICM 382
           AEKMIFGVSGIDPQRRAELIKV              LDIDLSWR+HKVSDGQRRRVQICM
Sbjct: 121 AEKMIFGVSGIDPQRRAELIKVRCESETPKLQSCNVLDIDLSWRLHKVSDGQRRRVQICM 180

Query: 381 GLLKPFKVLLLDEITXXXXXXXXXXXLNFLKKECQERGATIIYATHIFDGLENWPSHIVY 202
           GLLKPFKVLLLDEIT           L FL+KEC+ERGATIIYATHIFDGLENWPSH+VY
Sbjct: 181 GLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLENWPSHLVY 240

Query: 201 VAHGKLQLAMPMDKVKEISNLSLMRTVECWLXXXXXXXXXXXXXXKASGLSEFKDQIDGS 22
           VAHGKLQLAMPM+KV+E+SNLSLMRTVE WL              KA GL EF+ Q++GS
Sbjct: 241 VAHGKLQLAMPMEKVREMSNLSLMRTVESWLRKERDEGRKRRKERKAVGLPEFESQVEGS 300

Query: 21  RVIGGPA 1
           RV G PA
Sbjct: 301 RVAGDPA 307


>ref|XP_002308160.1| ABC transporter family protein [Populus trichocarpa]
           gi|222854136|gb|EEE91683.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 325

 Score =  247 bits (630), Expect = 8e-64
 Identities = 125/173 (72%), Positives = 137/173 (79%)
 Frame = -2

Query: 519 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI 340
           AEKMIFGV+GIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLL+PFKVLLLDEI
Sbjct: 118 AEKMIFGVAGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEI 177

Query: 339 TXXXXXXXXXXXLNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 160
           T           L FL+KEC+ERGATIIYATHIFDGLE WP+HI+YVAHGKLQ A+PM K
Sbjct: 178 TVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEEWPTHILYVAHGKLQFALPMAK 237

Query: 159 VKEISNLSLMRTVECWLXXXXXXXXXXXXXXKASGLSEFKDQIDGSRVIGGPA 1
           +KE SNLSLMRTVE WL              KA GL E++ Q++GSRV G PA
Sbjct: 238 IKETSNLSLMRTVESWLRKERDEERKRRQERKAGGLPEYEKQVEGSRVTGDPA 290


>ref|XP_003536037.1| PREDICTED: ABC transporter I family member 20-like [Glycine max]
          Length = 333

 Score =  244 bits (624), Expect = 4e-63
 Identities = 127/173 (73%), Positives = 137/173 (79%)
 Frame = -2

Query: 519 AEKMIFGVSGIDPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLKPFKVLLLDEI 340
           A+KMIFGV GIDPQRRAELIKVLDIDLSWR+HKVSDGQRRRVQICMGLLKPFKVLLLDEI
Sbjct: 125 AQKMIFGVPGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEI 184

Query: 339 TXXXXXXXXXXXLNFLKKECQERGATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMDK 160
           T           L FL+KEC ERGATIIYATHIFDGLE+WP++IVYVAHGKLQLAMPMDK
Sbjct: 185 TVDLDVLARADLLRFLRKECDERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDK 244

Query: 159 VKEISNLSLMRTVECWLXXXXXXXXXXXXXXKASGLSEFKDQIDGSRVIGGPA 1
           VKEIS LSLMRTVE WL              KA+GL EF  +++ SRV G PA
Sbjct: 245 VKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKRVEESRVTGDPA 297


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