BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018687
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4...   339   8e-91
emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]   339   8e-91
ref|XP_002523094.1| gamma-tubulin complex component, putative [R...   338   1e-90
ref|XP_002320339.1| tubulin gamma complex-associated protein [Po...   337   3e-90
ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata s...   329   8e-88

>ref|XP_002270318.1| PREDICTED: gamma-tubulin complex component 4 homolog [Vitis vinifera]
            gi|297743902|emb|CBI36872.3| unnamed protein product
            [Vitis vinifera]
          Length = 743

 Score =  339 bits (869), Expect = 8e-91
 Identities = 172/216 (79%), Positives = 183/216 (84%), Gaps = 2/216 (0%)
 Frame = +2

Query: 26   VCFKYLKVFQYLLRLKRTQMELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPM 205
            V  KY +VFQYLLRLKRTQMELEKSWAS MHQDHT+FA+HR+D INC++SQQRRQ  RPM
Sbjct: 524  VLSKYRRVFQYLLRLKRTQMELEKSWASVMHQDHTDFAQHRNDHINCTVSQQRRQRSRPM 583

Query: 206  WRVRERMAFLIRNLQFYIQVDVIESQWNVLHAHVQDSHDFTELVGFHQEYLSALISQSFL 385
            WR+RE MAFLIRNLQFYIQVDVIESQWNVL AH+Q+SHDFTELVGFHQEYLSALISQSFL
Sbjct: 584  WRIREHMAFLIRNLQFYIQVDVIESQWNVLQAHIQESHDFTELVGFHQEYLSALISQSFL 643

Query: 386  DIGSVSRILDSIMKLCLQFCWNIEC--DSVNTTELEHITEEFNKKSNSLYTILRSSRLVG 559
            DIGSVSRILDSIMKLCLQFCWNIE    S NT+ELE ITEEFNKKSNSLYTILRSSRL G
Sbjct: 644  DIGSVSRILDSIMKLCLQFCWNIENQESSSNTSELERITEEFNKKSNSLYTILRSSRLAG 703

Query: 560  SQRAPXXXXXXXXXXXXXXXETTAMGVLNVVRSRPT 667
            SQRAP               E TA GVLNVVRSRP+
Sbjct: 704  SQRAPFLRRFLLRLNFNSYFEATARGVLNVVRSRPS 739


>emb|CAN68024.1| hypothetical protein VITISV_003625 [Vitis vinifera]
          Length = 1529

 Score =  339 bits (869), Expect = 8e-91
 Identities = 172/216 (79%), Positives = 183/216 (84%), Gaps = 2/216 (0%)
 Frame = +2

Query: 26   VCFKYLKVFQYLLRLKRTQMELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPM 205
            V  KY +VFQYLLRLKRTQMELEKSWAS MHQDHT+FA+HR+D INC++SQQRRQ  RPM
Sbjct: 1310 VLSKYRRVFQYLLRLKRTQMELEKSWASVMHQDHTDFAQHRNDHINCTVSQQRRQRSRPM 1369

Query: 206  WRVRERMAFLIRNLQFYIQVDVIESQWNVLHAHVQDSHDFTELVGFHQEYLSALISQSFL 385
            WR+RE MAFLIRNLQFYIQVDVIESQWNVL AH+Q+SHDFTELVGFHQEYLSALISQSFL
Sbjct: 1370 WRIREHMAFLIRNLQFYIQVDVIESQWNVLQAHIQESHDFTELVGFHQEYLSALISQSFL 1429

Query: 386  DIGSVSRILDSIMKLCLQFCWNIEC--DSVNTTELEHITEEFNKKSNSLYTILRSSRLVG 559
            DIGSVSRILDSIMKLCLQFCWNIE    S NT+ELE ITEEFNKKSNSLYTILRSSRL G
Sbjct: 1430 DIGSVSRILDSIMKLCLQFCWNIENQESSSNTSELERITEEFNKKSNSLYTILRSSRLAG 1489

Query: 560  SQRAPXXXXXXXXXXXXXXXETTAMGVLNVVRSRPT 667
            SQRAP               E TA GVLNVVRSRP+
Sbjct: 1490 SQRAPFLRRFLLRLNFNSYFEATARGVLNVVRSRPS 1525


>ref|XP_002523094.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223537656|gb|EEF39279.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 756

 Score =  338 bits (867), Expect = 1e-90
 Identities = 174/220 (79%), Positives = 184/220 (83%), Gaps = 2/220 (0%)
 Frame = +2

Query: 26   VCFKYLKVFQYLLRLKRTQMELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPM 205
            V  KYL+VFQYLLRLKRTQMELEKSWAS MHQDHT+FAK  +DR NCSISQQRRQ  RPM
Sbjct: 531  VLSKYLRVFQYLLRLKRTQMELEKSWASVMHQDHTDFAKRHNDR-NCSISQQRRQRFRPM 589

Query: 206  WRVRERMAFLIRNLQFYIQVDVIESQWNVLHAHVQDSHDFTELVGFHQEYLSALISQSFL 385
            WRVRE MAFLIRNLQFYIQVDVIESQWNVL AH+QDSHDFTELVGFHQEYLSAL+SQSFL
Sbjct: 590  WRVREHMAFLIRNLQFYIQVDVIESQWNVLQAHIQDSHDFTELVGFHQEYLSALVSQSFL 649

Query: 386  DIGSVSRILDSIMKLCLQFCWNIEC--DSVNTTELEHITEEFNKKSNSLYTILRSSRLVG 559
            DIGSVSRILDSIM+LCLQFCW+IE    + NT+EL+HITEEFNKKSNSLYTILRSSRL G
Sbjct: 650  DIGSVSRILDSIMRLCLQFCWSIENQESNPNTSELDHITEEFNKKSNSLYTILRSSRLAG 709

Query: 560  SQRAPXXXXXXXXXXXXXXXETTAMGVLNVVRSRPTLPDL 679
            SQRAP               E TA GVLNVVR  PTLP L
Sbjct: 710  SQRAPFLRRFLLRLNYNAFFEATARGVLNVVRPSPTLPSL 749


>ref|XP_002320339.1| tubulin gamma complex-associated protein [Populus trichocarpa]
            gi|222861112|gb|EEE98654.1| tubulin gamma
            complex-associated protein [Populus trichocarpa]
          Length = 728

 Score =  337 bits (864), Expect = 3e-90
 Identities = 169/211 (80%), Positives = 181/211 (85%), Gaps = 2/211 (0%)
 Frame = +2

Query: 47   VFQYLLRLKRTQMELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPMWRVRERM 226
            VFQYLLRLKRTQMELEKSWAS MHQDHT+FAK R+DR+NCS+SQQRRQ  RPMW VRE M
Sbjct: 517  VFQYLLRLKRTQMELEKSWASVMHQDHTDFAKRRNDRLNCSVSQQRRQRFRPMWHVREHM 576

Query: 227  AFLIRNLQFYIQVDVIESQWNVLHAHVQDSHDFTELVGFHQEYLSALISQSFLDIGSVSR 406
            AFLIRNLQFYIQVDVIESQWNVL AH++DSHDFTELVGFHQEYLSALISQSFLDIGSVSR
Sbjct: 577  AFLIRNLQFYIQVDVIESQWNVLQAHIRDSHDFTELVGFHQEYLSALISQSFLDIGSVSR 636

Query: 407  ILDSIMKLCLQFCWNIEC--DSVNTTELEHITEEFNKKSNSLYTILRSSRLVGSQRAPXX 580
            ILDSIMKLCLQFCW+IE   ++ NT+ELEH+TEEFNKKSNSLYTILRSSRL GSQRAP  
Sbjct: 637  ILDSIMKLCLQFCWSIENQENNPNTSELEHLTEEFNKKSNSLYTILRSSRLAGSQRAPFL 696

Query: 581  XXXXXXXXXXXXXETTAMGVLNVVRSRPTLP 673
                         ETTA GVLN+VR  PTLP
Sbjct: 697  RRFLLRLNFNLFFETTAQGVLNIVRPSPTLP 727


>ref|XP_002877940.1| tubulin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323778|gb|EFH54199.1| tubulin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 745

 Score =  329 bits (843), Expect = 8e-88
 Identities = 170/218 (77%), Positives = 178/218 (81%), Gaps = 2/218 (0%)
 Frame = +2

Query: 26   VCFKYLKVFQYLLRLKRTQMELEKSWASAMHQDHTEFAKHRHDRINCSISQQRRQGIRPM 205
            V  KYLKVFQYL+RLKRTQMELEKSWAS MHQDH E A+HR D IN S SQQRRQGIRPM
Sbjct: 527  VLSKYLKVFQYLIRLKRTQMELEKSWASVMHQDHIESAQHRKDGINGSTSQQRRQGIRPM 586

Query: 206  WRVRERMAFLIRNLQFYIQVDVIESQWNVLHAHVQDSHDFTELVGFHQEYLSALISQSFL 385
            WRVRE MAFLIRNLQFYIQVDVIESQW VL  H+ DS DFTELVGFHQEYLSALISQSFL
Sbjct: 587  WRVREHMAFLIRNLQFYIQVDVIESQWKVLQTHIHDSQDFTELVGFHQEYLSALISQSFL 646

Query: 386  DIGSVSRILDSIMKLCLQFCWNIEC--DSVNTTELEHITEEFNKKSNSLYTILRSSRLVG 559
            DIGSVSRILDSIMKLCLQFCWNIE   ++ NT+ELE+I EEFNKKSNSLYTILRSS+L G
Sbjct: 647  DIGSVSRILDSIMKLCLQFCWNIESQENNPNTSELENIAEEFNKKSNSLYTILRSSKLAG 706

Query: 560  SQRAPXXXXXXXXXXXXXXXETTAMGVLNVVRSRPTLP 673
            SQRAP               E TA GVLNVVR RP LP
Sbjct: 707  SQRAPFLRRFLLRLNFNSFYEATARGVLNVVRQRPALP 744