BLASTX nr result

ID: Coptis21_contig00018686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018686
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522492.1| conserved hypothetical protein [Ricinus comm...   154   7e-36
ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248...   150   1e-34
ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatu...   145   3e-33
ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806...   145   3e-33

>ref|XP_002522492.1| conserved hypothetical protein [Ricinus communis]
           gi|223538377|gb|EEF39984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score =  154 bits (389), Expect = 7e-36
 Identities = 80/116 (68%), Positives = 90/116 (77%)
 Frame = -3

Query: 348 NERFDSMNAMEILRETIRILRYNCPGFMVIAAFLICPVSAIILSNVLVDQSFFKRLTIRL 169
           N +F SMNA+EILRET+RILR N   FM+IAA LICPVSAI+LSNV VDQS  KRLTIRL
Sbjct: 44  NHQFHSMNALEILRETVRILRCNSSSFMIIAALLICPVSAIVLSNVFVDQSIVKRLTIRL 103

Query: 168 LLVAQSCGLPLTTLIKQLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYS 1
           LLVA+S GLPL   +KQ C  LSE+ + +    PL IT SLLSKAAVVY VDCTYS
Sbjct: 104 LLVAKSSGLPLRPFVKQSCHHLSEMAIASAMYFPLFITLSLLSKAAVVYSVDCTYS 159


>ref|XP_002267888.1| PREDICTED: uncharacterized protein LOC100248804 [Vitis vinifera]
          Length = 347

 Score =  150 bits (379), Expect = 1e-34
 Identities = 77/112 (68%), Positives = 91/112 (81%)
 Frame = -3

Query: 336 DSMNAMEILRETIRILRYNCPGFMVIAAFLICPVSAIILSNVLVDQSFFKRLTIRLLLVA 157
           D MNA++ILRET+ ILRYN  GFM+IAA LICPVSA++LSNVLVDQS  KRL+IRLLLVA
Sbjct: 36  DPMNALQILRETVWILRYNSSGFMLIAALLICPVSALLLSNVLVDQSIVKRLSIRLLLVA 95

Query: 156 QSCGLPLTTLIKQLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYS 1
           +S GLPL   IKQ CQ+ SE+ ++A    PL+ T SLLSKAAVVY VDC+YS
Sbjct: 96  RSSGLPLRPFIKQSCQKFSEMAISAATCFPLYFTISLLSKAAVVYSVDCSYS 147


>ref|XP_002315026.1| predicted protein [Populus trichocarpa] gi|222864066|gb|EEF01197.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  149 bits (375), Expect = 3e-34
 Identities = 81/134 (60%), Positives = 99/134 (73%)
 Frame = -3

Query: 402 EKNDLASPDTNLRRSFSVNERFDSMNAMEILRETIRILRYNCPGFMVIAAFLICPVSAII 223
           + ++L S D + R     N +F SM+A+EILRET+RILR N   FM IAA LICPVSAI+
Sbjct: 17  QNSELESSDFSDRH----NHQFHSMSALEILRETVRILRCNSWSFMTIAALLICPVSAIL 72

Query: 222 LSNVLVDQSFFKRLTIRLLLVAQSCGLPLTTLIKQLCQRLSEIILTAIFSVPLHITFSLL 43
           LSNVLVDQS  K+L++RLLLVA+S GLPL   IKQ C R SE+ +++    PL IT SLL
Sbjct: 73  LSNVLVDQSIVKKLSVRLLLVAKSSGLPLRPFIKQSCHRFSEMAVSSAMCFPLFITLSLL 132

Query: 42  SKAAVVYMVDCTYS 1
           S+AAVVY VDCTYS
Sbjct: 133 SRAAVVYSVDCTYS 146


>ref|XP_003607775.1| ATP synthase subunit beta [Medicago truncatula]
           gi|355508830|gb|AES89972.1| ATP synthase subunit beta
           [Medicago truncatula]
          Length = 409

 Score =  145 bits (367), Expect = 3e-33
 Identities = 75/133 (56%), Positives = 96/133 (72%), Gaps = 5/133 (3%)
 Frame = -3

Query: 384 SPDTNLRRSFSV-----NERFDSMNAMEILRETIRILRYNCPGFMVIAAFLICPVSAIIL 220
           S +T LR++  +     N    SMNA++ILRETIRILR+N   FM+IA  LICPVSA++L
Sbjct: 22  SDETRLRQALELELSDHNHEIQSMNALDILRETIRILRFNSWAFMIIAFLLICPVSAVLL 81

Query: 219 SNVLVDQSFFKRLTIRLLLVAQSCGLPLTTLIKQLCQRLSEIILTAIFSVPLHITFSLLS 40
           SNVLVD+S  K LTIRL+LVA++ GLPL  +IKQ CQR ++ ++ +    PL+ T  LLS
Sbjct: 82  SNVLVDESIVKNLTIRLMLVAETSGLPLRPMIKQSCQRFADTVIASAMCFPLYATLLLLS 141

Query: 39  KAAVVYMVDCTYS 1
           K AVVY VDCTYS
Sbjct: 142 KTAVVYSVDCTYS 154


>ref|XP_003528573.1| PREDICTED: uncharacterized protein LOC100806351 [Glycine max]
          Length = 357

 Score =  145 bits (366), Expect = 3e-33
 Identities = 73/116 (62%), Positives = 90/116 (77%)
 Frame = -3

Query: 348 NERFDSMNAMEILRETIRILRYNCPGFMVIAAFLICPVSAIILSNVLVDQSFFKRLTIRL 169
           N +  SMNA+EILRETIRILR+N  GFM IA  LICPVSA++LSNV+VD+S  K L+IRL
Sbjct: 38  NYQIQSMNALEILRETIRILRFNSWGFMAIAFMLICPVSAVLLSNVIVDESIVKNLSIRL 97

Query: 168 LLVAQSCGLPLTTLIKQLCQRLSEIILTAIFSVPLHITFSLLSKAAVVYMVDCTYS 1
           +LVAQ+ GLPL  +IKQ CQR +E ++++    P + T  LLSKAAVVY VDCTYS
Sbjct: 98  MLVAQTSGLPLRPIIKQSCQRFAETVVSSAMCFPFYATLLLLSKAAVVYSVDCTYS 153


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