BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018682
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23...   115   3e-24
ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23...   114   8e-24
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   114   8e-24
ref|XP_002305813.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_003555897.1| PREDICTED: putative DNA repair protein RAD23...   112   2e-23

>ref|XP_003536688.1| PREDICTED: putative DNA repair protein RAD23-3-like [Glycine max]
          Length = 408

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/68 (79%), Positives = 64/68 (94%)
 Frame = -3

Query: 213 GAEGNVLGQLDAAMPQSVIVTPEEHEAIERLEAMGFNRAIVLKVFFACNKNEELATNYLL 34
           GAEGN+LGQ+ +AMPQ+V VTPEE +AIERLEAMGF+RAIVL+V+FACNKNEELA NYLL
Sbjct: 340 GAEGNILGQMASAMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLL 399

Query: 33  DHINEFEE 10
           DH++EFEE
Sbjct: 400 DHMHEFEE 407


>ref|XP_002282352.1| PREDICTED: putative DNA repair protein RAD23-3 [Vitis vinifera]
           gi|297737829|emb|CBI27030.3| unnamed protein product
           [Vitis vinifera]
          Length = 397

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = -3

Query: 213 GAEGNVLGQLDAAMPQSVIVTPEEHEAIERLEAMGFNRAIVLKVFFACNKNEELATNYLL 34
           G EGN+LGQL AAMPQ+V VTPEE EAI RLEAMGF+RA+VL+VFFACNKNEELA NYLL
Sbjct: 330 GGEGNILGQLAAAMPQAVTVTPEEREAIARLEAMGFDRALVLEVFFACNKNEELAANYLL 389

Query: 33  DHINEFEE 10
           DH++EFE+
Sbjct: 390 DHMHEFED 397


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
           gi|223531394|gb|EEF33228.1| uv excision repair protein
           rad23, putative [Ricinus communis]
          Length = 409

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/68 (77%), Positives = 62/68 (91%)
 Frame = -3

Query: 213 GAEGNVLGQLDAAMPQSVIVTPEEHEAIERLEAMGFNRAIVLKVFFACNKNEELATNYLL 34
           G EGN++GQL AAMPQ+V VTPEE EAIERLEAMGF+R +VL+VFFACNKNEELA NYLL
Sbjct: 342 GGEGNIMGQLAAAMPQAVTVTPEEREAIERLEAMGFDRGLVLEVFFACNKNEELAANYLL 401

Query: 33  DHINEFEE 10
           DH++EFE+
Sbjct: 402 DHMHEFED 409


>ref|XP_002305813.1| predicted protein [Populus trichocarpa] gi|222848777|gb|EEE86324.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/66 (81%), Positives = 62/66 (93%)
 Frame = -3

Query: 207 EGNVLGQLDAAMPQSVIVTPEEHEAIERLEAMGFNRAIVLKVFFACNKNEELATNYLLDH 28
           EGNVLGQL +AMPQ+V VTPEE EAIERLEAMGF+RAIVL+V+FACNKNEELA NYLLDH
Sbjct: 320 EGNVLGQLASAMPQAVTVTPEEREAIERLEAMGFDRAIVLEVYFACNKNEELAANYLLDH 379

Query: 27  INEFEE 10
           ++EF+E
Sbjct: 380 MHEFDE 385


>ref|XP_003555897.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 3
           [Glycine max]
          Length = 381

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/68 (76%), Positives = 62/68 (91%)
 Frame = -3

Query: 213 GAEGNVLGQLDAAMPQSVIVTPEEHEAIERLEAMGFNRAIVLKVFFACNKNEELATNYLL 34
           G EGN+LGQ+ + MPQ+V VTPEE +AIERLEAMGF+RAIVL+V+FACNKNEELA NYLL
Sbjct: 313 GGEGNILGQMASGMPQAVTVTPEERQAIERLEAMGFDRAIVLEVYFACNKNEELAANYLL 372

Query: 33  DHINEFEE 10
           DH++EFEE
Sbjct: 373 DHMHEFEE 380