BLASTX nr result

ID: Coptis21_contig00018647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018647
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   302   2e-79
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...   292   2e-76
ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|2...   278   2e-72
ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225...   271   3e-70
ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206...   271   3e-70

>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
            gi|147841364|emb|CAN71240.1| hypothetical protein
            VITISV_034160 [Vitis vinifera]
            gi|296085846|emb|CBI31170.3| unnamed protein product
            [Vitis vinifera]
          Length = 570

 Score =  302 bits (773), Expect = 2e-79
 Identities = 179/348 (51%), Positives = 216/348 (62%), Gaps = 5/348 (1%)
 Frame = +1

Query: 226  KSRPTPSSSFSEKSRAPQNXXXXXXXXXXXXXXAXXXXXXXXXXXXXXTPTRRNTAPGSQ 405
            K RP+P+S  +  S  PQ               A              TPTRR  A    
Sbjct: 230  KPRPSPNSRPTTPSSRPQ-------------LQANLSSPAARSNSRPSTPTRRTPAASLS 276

Query: 406  PLIGYLASNGRVIANGRNXXXXXXXXXXXXXXXXXXQPIVPPDFPLDTPPNLRTTMPDRP 585
            P  G   S  R ++NGRN                  QPIV PDFPLDTPPNLRTT+PDRP
Sbjct: 277  PTAGPSPSTARAMSNGRNPAPASRPSSPSPRVRNPPQPIVLPDFPLDTPPNLRTTLPDRP 336

Query: 586  VSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVTRGRLPDPPGKGRLHSNGNSINAVE 765
            +SAGRSRP AA++ +GNSE      P R+ SSPIVTRGR+ +P  +GRLHSNG+  ++ E
Sbjct: 337  LSAGRSRPGAAMTMKGNSET-----PTRRQSSPIVTRGRVSEPNARGRLHSNGHVADSPE 391

Query: 766  SQRTPPVIDPASRRPAK-SATATESSGFGRTISKKSLDMALRHMDIRHGSGSIRSSPGSN 942
            S++   V +P SR+P K S T++ES+GFGRTISKKSLDMA+RHMDIR+G+GSIR   G+ 
Sbjct: 392  SRKASHVTEP-SRKPVKTSTTSSESTGFGRTISKKSLDMAIRHMDIRNGTGSIRPLSGTT 450

Query: 943  LFPQSIRLGTTKGQSAR---VSDVPAPVGSNGGPPTSSNIDILENGNCTSRSLDGEFAED 1113
            LFPQSIR   +K QSAR    S  PA V SNG  P S+N    ENGN  +R  +    ED
Sbjct: 451  LFPQSIRSAASKTQSARASSASSAPASVNSNGSLPASNNGVPSENGNYFTRPSENGAEED 510

Query: 1114 FSRFSAKLSELDIYESSRYDAMLLKEDSKNTNWLLD-DKSDQGFMFDH 1254
              RFSAKL++ DIYESSRYDA+LLKED KNTNWL   DKSDQG +FD+
Sbjct: 511  DGRFSAKLNQTDIYESSRYDAILLKEDLKNTNWLHSVDKSDQGPIFDN 558


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
            gi|223531882|gb|EEF33699.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 580

 Score =  292 bits (747), Expect = 2e-76
 Identities = 173/345 (50%), Positives = 214/345 (62%), Gaps = 4/345 (1%)
 Frame = +1

Query: 232  RPTPSSSFSEKSRAPQNXXXXXXXXXXXXXXAXXXXXXXXXXXXXXTPTRRNTAPGSQPL 411
            RP P+SS  +K+R  Q+              A              TPT+RN      P 
Sbjct: 237  RPAPTSSLVDKNRQSQSSRPSTPSSRAQLP-ANSNSTSTRSNSRPSTPTQRNPVSSVSPA 295

Query: 412  IGYLASNGRVIANGRNXXXXXXXXXXXXXXXXXXQPIVPPDFPLDTPPNLRTTMPDRPVS 591
             G   S GRV +NGR                   QP+VPPDFPLDTPPNLRTT+PDRP+S
Sbjct: 296  SGPSISAGRVPSNGRISAPASRPSSPGPRIRPSQQPVVPPDFPLDTPPNLRTTLPDRPIS 355

Query: 592  AGRSRPSAAVSGRGNSE-PGLTNPPRRQSSSPIVTRGRLPDPPGKGRLHSNGNSINAVES 768
            AGRSRP A+ + +G+ E  G TN PRR  SSPIV+RGRL + PGKGR HSNG++ +  E 
Sbjct: 356  AGRSRPGASTTIKGSPETTGATNVPRRH-SSPIVSRGRLAEAPGKGRAHSNGHAADISEP 414

Query: 769  QRTPPVIDPASRRPAKSA-TATESSGFGRTISKKSLDMALRHMDIRHGSGSIRSSPGSNL 945
            ++   V DP  R+P KS+ T T+++GFGRTISKKSLDMA+RHMDIR G+GS R+   + L
Sbjct: 415  RKVSHVSDPGMRKPVKSSVTTTDNNGFGRTISKKSLDMAIRHMDIRTGNGSTRALSSTTL 474

Query: 946  FPQSIRLGTTKGQSARVSDVPAPVGSNGGPPTSSNIDILENGNCTSRSLDGEFAEDFSRF 1125
            FPQSIR   TK QS R  + P    +NGG        ILENG+  SR ++     +  R+
Sbjct: 475  FPQSIRT-ATKAQSVRPMNAPES-NNNGG--------ILENGHHVSRPVEYGSEVNDGRY 524

Query: 1126 SAKLSELDIYESSRYDAMLLKEDSKNTNWL--LDDKSDQGFMFDH 1254
            SAKLSE+DIYESSRYDA+LLKED KNTNWL  +DDKSDQG +FD+
Sbjct: 525  SAKLSEVDIYESSRYDALLLKEDLKNTNWLHSIDDKSDQGSIFDN 569


>ref|XP_002323683.1| predicted protein [Populus trichocarpa] gi|222868313|gb|EEF05444.1|
            predicted protein [Populus trichocarpa]
          Length = 596

 Score =  278 bits (711), Expect = 2e-72
 Identities = 173/349 (49%), Positives = 215/349 (61%), Gaps = 6/349 (1%)
 Frame = +1

Query: 226  KSRPTPSSSFSEKSRAPQNXXXXXXXXXXXXXXAXXXXXXXXXXXXXXTPTRRNTAPGSQ 405
            ++RP P+SS  +K+R  QN              A              TPTRRN AP S 
Sbjct: 243  RARPAPTSSSIDKTRPSQNSRPSTPSSRGQIP-ANLSTAPTRSNSRPSTPTRRNPAPSSS 301

Query: 406  PLIGYLASNGRVIANGRNXXXXXXXXXXXXXXXXXXQPIVPPDFPLDTPPNLRTTMPDRP 585
                   S GRV++N R                   QP+VPPDFPLDTPPNLRTT+PDRP
Sbjct: 302  TASSPSTSAGRVLSNNR-IPGPTSRPNSPSPRVRPQQPVVPPDFPLDTPPNLRTTLPDRP 360

Query: 586  VSAGRSRPSAAVSGRGNSEP-GLTNPPRRQSSSPIVTRGRLPDPPGKGRLHSNGNSINAV 762
            +SAGRSRP+   + +GN E  G    PRR SS PIV+RGRL +P GKGR+HSNG+  +A 
Sbjct: 361  LSAGRSRPNVHATMKGNPETVGSVIAPRRHSS-PIVSRGRLTEPSGKGRVHSNGHIADAP 419

Query: 763  ESQRTPPVIDPASRRPAKSA-TATESSGFGRTISKKSLDMALRHMDIRHGSGSIRSSPGS 939
            E ++   V +   R+P KS+ TA+ES+GFGRTISKKSLDMA+RHMD+R+G+GS RS   +
Sbjct: 420  EPRKVSHVSELGMRKPVKSSSTASESTGFGRTISKKSLDMAIRHMDLRNGTGSTRSLSST 479

Query: 940  NLFPQSIRLGTTKGQSARVSDVPAPVGSNGGPPTSSNIDILENGNCTSRSLD-GEFAEDF 1116
             LFPQSIR  T K  SAR    P  + +NG      N D+LEN +  SR+ +    A D 
Sbjct: 480  TLFPQSIRSATPKTHSARSRSAPESI-NNG---NLQNGDVLENESYFSRATEIRREANDG 535

Query: 1117 SRFSAKLSE-LDIYESSRYDAMLLKEDSKNTNWL--LDDKSDQGFMFDH 1254
             R+SAKLSE +DI ESSRYDA+LLKED KNT+WL  +DDKSDQG  FD+
Sbjct: 536  QRYSAKLSEVVDICESSRYDAILLKEDLKNTDWLHSVDDKSDQGPFFDN 584


>ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225804, partial [Cucumis
            sativus]
          Length = 484

 Score =  271 bits (693), Expect = 3e-70
 Identities = 159/348 (45%), Positives = 216/348 (62%), Gaps = 5/348 (1%)
 Frame = +1

Query: 226  KSRPTPSSSFSEKSRAPQNXXXXXXXXXXXXXXAXXXXXXXXXXXXXXTPTRRNTAPGSQ 405
            ++RP+P+S   EK R P                A              TPTRRN+AP   
Sbjct: 127  RARPSPNSPSIEKPR-PLQSSRPSTPNSRPQIPANLSSPAARSNSRPSTPTRRNSAPSLS 185

Query: 406  PLIGYLASNGRVIA-NGRNXXXXXXXXXXXXXXXXXXQPIVPPDFPLDTPPNLRTTMPDR 582
             ++G  +S  RV++ NGR+                  QPIVPPDFPLDTPPNLRTT+PDR
Sbjct: 186  SVVGTPSSTSRVLSTNGRSSTSTSRPSSPSPRVRAAPQPIVPPDFPLDTPPNLRTTLPDR 245

Query: 583  PVSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVTRGRLPDPPGKGRLHSNGNSINAV 762
            P+SAGRSRP+ A S RG+ E   T    R+++SP +TRGR+ D PG+GRL++NG+  ++ 
Sbjct: 246  PISAGRSRPTPASSVRGSPETTSTGTVPRRAASPTITRGRITDAPGRGRLNTNGHLSDSP 305

Query: 763  ESQRTPPVIDPASRRPAKSATAT-ESSGFGRTISKKSLDMALRHMDIRHGSGSIRSSPGS 939
            E++R     D + RRP K++T T ES+GFGR+ISKKSLDMA+RHMDIR+G GS+RS  G+
Sbjct: 306  ETRRLSSSSDLSGRRPVKASTTTAESNGFGRSISKKSLDMAIRHMDIRNGPGSVRSGSGN 365

Query: 940  NLFPQSIRLGTTKGQSARVSDVPAPVGSNGGPPTSSNIDILENGNCTSRSLDGEF-AEDF 1116
             LFP SIR  T+K QS  +S+  A + ++    +++N+D   + +  S ++  E    + 
Sbjct: 366  TLFPHSIRSATSKTQSIALSNSEA-IDTDYQMSSNNNMDRGNHFHRPSATIGTEVGGGEN 424

Query: 1117 SRFSAKLSELDIYESSRYDAMLLKEDSKNTNWL--LDDKSDQGFMFDH 1254
             RFSA L+ LDIYESSRYDA+LLKED KNTNWL   DDK+D   + D+
Sbjct: 425  GRFSASLNHLDIYESSRYDAILLKEDLKNTNWLHSTDDKTDLASILDN 472


>ref|XP_004142729.1| PREDICTED: uncharacterized protein LOC101206216 [Cucumis sativus]
          Length = 578

 Score =  271 bits (693), Expect = 3e-70
 Identities = 159/348 (45%), Positives = 216/348 (62%), Gaps = 5/348 (1%)
 Frame = +1

Query: 226  KSRPTPSSSFSEKSRAPQNXXXXXXXXXXXXXXAXXXXXXXXXXXXXXTPTRRNTAPGSQ 405
            ++RP+P+S   EK R P                A              TPTRRN+AP   
Sbjct: 221  RARPSPNSPSIEKPR-PLQSSRPSTPNSRPQIPANLSSPAARSNSRPSTPTRRNSAPSLS 279

Query: 406  PLIGYLASNGRVIA-NGRNXXXXXXXXXXXXXXXXXXQPIVPPDFPLDTPPNLRTTMPDR 582
             ++G  +S  RV++ NGR+                  QPIVPPDFPLDTPPNLRTT+PDR
Sbjct: 280  SVVGTPSSTSRVLSTNGRSSTSTSRPSSPSPRVRAAPQPIVPPDFPLDTPPNLRTTLPDR 339

Query: 583  PVSAGRSRPSAAVSGRGNSEPGLTNPPRRQSSSPIVTRGRLPDPPGKGRLHSNGNSINAV 762
            P+SAGRSRP+ A S RG+ E   T    R+++SP +TRGR+ D PG+GRL++NG+  ++ 
Sbjct: 340  PISAGRSRPTPASSVRGSPETTSTGTVPRRAASPTITRGRITDAPGRGRLNTNGHLSDSP 399

Query: 763  ESQRTPPVIDPASRRPAKSATAT-ESSGFGRTISKKSLDMALRHMDIRHGSGSIRSSPGS 939
            E++R     D + RRP K++T T ES+GFGR+ISKKSLDMA+RHMDIR+G GS+RS  G+
Sbjct: 400  ETRRLSSSSDLSGRRPVKASTTTAESNGFGRSISKKSLDMAIRHMDIRNGPGSVRSGSGN 459

Query: 940  NLFPQSIRLGTTKGQSARVSDVPAPVGSNGGPPTSSNIDILENGNCTSRSLDGEF-AEDF 1116
             LFP SIR  T+K QS  +S+  A + ++    +++N+D   + +  S ++  E    + 
Sbjct: 460  TLFPHSIRSATSKTQSIALSNSEA-IDTDYQMSSNNNMDRGNHFHRPSATIGTEVGGGEN 518

Query: 1117 SRFSAKLSELDIYESSRYDAMLLKEDSKNTNWL--LDDKSDQGFMFDH 1254
             RFSA L+ LDIYESSRYDA+LLKED KNTNWL   DDK+D   + D+
Sbjct: 519  GRFSASLNHLDIYESSRYDAILLKEDLKNTNWLHSTDDKTDLASILDN 566


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