BLASTX nr result

ID: Coptis21_contig00018627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018627
         (1202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283515.1| PREDICTED: uncharacterized protein LOC100265...   410   e-112
ref|XP_002298049.1| predicted protein [Populus trichocarpa] gi|2...   396   e-108
ref|XP_002283528.1| PREDICTED: uncharacterized protein LOC100265...   395   e-107
ref|XP_002509766.1| conserved hypothetical protein [Ricinus comm...   391   e-106
ref|XP_004143924.1| PREDICTED: uncharacterized protein LOC101222...   385   e-104

>ref|XP_002283515.1| PREDICTED: uncharacterized protein LOC100265107 isoform 1 [Vitis
            vinifera] gi|297742559|emb|CBI34708.3| unnamed protein
            product [Vitis vinifera]
          Length = 264

 Score =  410 bits (1053), Expect = e-112
 Identities = 195/259 (75%), Positives = 209/259 (80%)
 Frame = -3

Query: 1113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 934
            GTS FVIRWIN LTMLLA+ VIGFGVW++THHD CRK+LTLPVLGLG FI L+S+IGFMG
Sbjct: 4    GTSTFVIRWINFLTMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMG 63

Query: 933  AYKNXXXXXXXXXXXXXXXXXXXLVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 754
            A KN                   LVFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWF 
Sbjct: 64   ALKNNSILLWIYLIMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFL 123

Query: 753  KQLNNTENWRHLKSCLVKSEDCNNLPXXXXXXXXXXKGNLTPVEAGCCRPPSECGYPAIN 574
            KQLNNT NW+HLKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124  KQLNNTRNWKHLKSCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVN 183

Query: 573  ASYYDLSFRPISTNSDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 394
            ASYYDLSF PIS+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVVL
Sbjct: 184  ASYYDLSFHPISSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVVLFVVL 243

Query: 393  SFIYFVGCCARRNATRDHS 337
            S +Y VGCCARRNAT   S
Sbjct: 244  SMVYLVGCCARRNATSSRS 262


>ref|XP_002298049.1| predicted protein [Populus trichocarpa] gi|222845307|gb|EEE82854.1|
            predicted protein [Populus trichocarpa]
          Length = 263

 Score =  396 bits (1018), Expect = e-108
 Identities = 189/259 (72%), Positives = 208/259 (80%)
 Frame = -3

Query: 1113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 934
            GTSNFVIRWIN LTMLLA+AVI FGVW++THHDSCR++LTLPVLGLG  I ++S+IGF+G
Sbjct: 4    GTSNFVIRWINFLTMLLAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAVIFVISIIGFLG 63

Query: 933  AYKNXXXXXXXXXXXXXXXXXXXLVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 754
            A K+                   LVFTVLAFIITNNGSGHSV GLRYKEYQL+DYSSWF 
Sbjct: 64   ALKSNSILLWIYLVMLCIILVAILVFTVLAFIITNNGSGHSVPGLRYKEYQLQDYSSWFL 123

Query: 753  KQLNNTENWRHLKSCLVKSEDCNNLPXXXXXXXXXXKGNLTPVEAGCCRPPSECGYPAIN 574
            KQLNNT+NW  LKSCLVK++DCNNLP             LT +EAGCCRPPS CGYPA+N
Sbjct: 124  KQLNNTKNWNRLKSCLVKTDDCNNLPRKYKTIKQYKSAKLTAIEAGCCRPPSVCGYPAVN 183

Query: 573  ASYYDLSFRPISTNSDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 394
            ASYYDLSF PIS+N DCKLY+NSRA KCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVVL
Sbjct: 184  ASYYDLSFHPISSNKDCKLYKNSRATKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVVL 243

Query: 393  SFIYFVGCCARRNATRDHS 337
            S IYFVGCCARR+A R HS
Sbjct: 244  SMIYFVGCCARRSAARSHS 262


>ref|XP_002283528.1| PREDICTED: uncharacterized protein LOC100265107 isoform 2 [Vitis
            vinifera]
          Length = 258

 Score =  395 bits (1014), Expect = e-107
 Identities = 190/259 (73%), Positives = 204/259 (78%)
 Frame = -3

Query: 1113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 934
            GTS FVIRWIN LTMLLA+ VIGFGVW++THHD CRK+LTLPVLGLG FI L+S+IGFMG
Sbjct: 4    GTSTFVIRWINFLTMLLAVGVIGFGVWMSTHHDGCRKSLTLPVLGLGAFIFLISIIGFMG 63

Query: 933  AYKNXXXXXXXXXXXXXXXXXXXLVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 754
            A KN                   LVFTVLAFIITNNGSGH+VAGLRYKEYQL+DYSSWF 
Sbjct: 64   ALKNNSILLWIYLIMLCFILVAILVFTVLAFIITNNGSGHNVAGLRYKEYQLQDYSSWFL 123

Query: 753  KQLNNTENWRHLKSCLVKSEDCNNLPXXXXXXXXXXKGNLTPVEAGCCRPPSECGYPAIN 574
            KQLNNT NW+HLKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124  KQLNNTRNWKHLKSCLVKSEDCNNLSKKYKTLKQYKIAKLTPIEAGCCRPPSECGYPAVN 183

Query: 573  ASYYDLSFRPISTNSDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 394
            ASYYDLSF PIS+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV      
Sbjct: 184  ASYYDLSFHPISSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV------ 237

Query: 393  SFIYFVGCCARRNATRDHS 337
            S +Y VGCCARRNAT   S
Sbjct: 238  SMVYLVGCCARRNATSSRS 256


>ref|XP_002509766.1| conserved hypothetical protein [Ricinus communis]
            gi|223549665|gb|EEF51153.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 266

 Score =  391 bits (1004), Expect = e-106
 Identities = 185/260 (71%), Positives = 206/260 (79%)
 Frame = -3

Query: 1116 AGTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFM 937
            +GTSNFVIRWIN  TML+A+AVI FGVW++THHDSCR++LTLPVLGLG FI L+S+IGF+
Sbjct: 5    SGTSNFVIRWINFFTMLIAIAVIIFGVWMSTHHDSCRRSLTLPVLGLGAFIFLISIIGFL 64

Query: 936  GAYKNXXXXXXXXXXXXXXXXXXXLVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWF 757
            GA KN                   LVFTVLAFIIT+N SGH+  GLRYKEYQL+DYSSWF
Sbjct: 65   GALKNNSILLWIYLIMLCIILVAILVFTVLAFIITDNASGHNAPGLRYKEYQLQDYSSWF 124

Query: 756  RKQLNNTENWRHLKSCLVKSEDCNNLPXXXXXXXXXXKGNLTPVEAGCCRPPSECGYPAI 577
             KQLNNT+NW+ LKSCLVKSEDCNNL              LTP+EAGCCRPPS CGYPA+
Sbjct: 125  LKQLNNTQNWKRLKSCLVKSEDCNNLSKKYKTLKQYKSAKLTPIEAGCCRPPSGCGYPAV 184

Query: 576  NASYYDLSFRPISTNSDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVV 397
            NASY+DLSF P+S+N DCKLY+NSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNV LFVV
Sbjct: 185  NASYFDLSFHPVSSNKDCKLYKNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVILFVV 244

Query: 396  LSFIYFVGCCARRNATRDHS 337
            LS IYFVGCCARRN     S
Sbjct: 245  LSMIYFVGCCARRNVAGGRS 264


>ref|XP_004143924.1| PREDICTED: uncharacterized protein LOC101222956 [Cucumis sativus]
            gi|449495842|ref|XP_004159961.1| PREDICTED:
            uncharacterized protein LOC101226746 [Cucumis sativus]
          Length = 264

 Score =  385 bits (988), Expect = e-104
 Identities = 179/259 (69%), Positives = 204/259 (78%)
 Frame = -3

Query: 1113 GTSNFVIRWINVLTMLLALAVIGFGVWLNTHHDSCRKTLTLPVLGLGGFILLVSLIGFMG 934
            GTS F+IRWIN LTM LA+ VI FG+W+ THHD CRK+LTLPV+GLGGFI +VS++GF+G
Sbjct: 4    GTSIFIIRWINFLTMFLAILVIIFGIWMGTHHDGCRKSLTLPVMGLGGFIFVVSIVGFLG 63

Query: 933  AYKNXXXXXXXXXXXXXXXXXXXLVFTVLAFIITNNGSGHSVAGLRYKEYQLRDYSSWFR 754
            A KN                   LVFTVLAFI+TNNGSGH VAGLRYKEYQL+DYS+WF 
Sbjct: 64   ALKNNSILLWIYLIMLCITLVGILVFTVLAFIVTNNGSGHDVAGLRYKEYQLQDYSTWFL 123

Query: 753  KQLNNTENWRHLKSCLVKSEDCNNLPXXXXXXXXXXKGNLTPVEAGCCRPPSECGYPAIN 574
            KQLNNTENW  LKSCLVKSEDCNNL              LTP+EAGCCRPPSECGYPA+N
Sbjct: 124  KQLNNTENWMRLKSCLVKSEDCNNLSKRYKTLKQYKLAKLTPMEAGCCRPPSECGYPAVN 183

Query: 573  ASYYDLSFRPISTNSDCKLYRNSRAIKCYNCDSCKAGVAQYMKTEWRVVAIFNVALFVVL 394
            ASYYDLSF P+++N DCK+Y+NS+A+KCY+CDSCKAGVAQYMKTEWR+VAIFNV LFVVL
Sbjct: 184  ASYYDLSFHPVNSNHDCKVYKNSKAVKCYDCDSCKAGVAQYMKTEWRLVAIFNVILFVVL 243

Query: 393  SFIYFVGCCARRNATRDHS 337
              IY VGCCARR A R+ S
Sbjct: 244  LIIYLVGCCARRKAARNRS 262


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