BLASTX nr result

ID: Coptis21_contig00018619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018619
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520687.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002320367.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002320652.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002520687.1| conserved hypothetical protein [Ricinus communis]
           gi|223540072|gb|EEF41649.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/44 (68%), Positives = 32/44 (72%)
 Frame = -3

Query: 205 VEDFYRAHRCLAERFDMLKSEPRTRLLTPLSSPFSTKYPSNKSM 74
           VEDFYR HR LAER+D LKS+   RLLT L SPFS KY S K M
Sbjct: 72  VEDFYRTHRSLAERYDQLKSDSGNRLLTTLGSPFSAKYQSQKFM 115


>ref|XP_002320367.1| predicted protein [Populus trichocarpa] gi|222861140|gb|EEE98682.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = -3

Query: 205 VEDFYRAHRCLAERFDMLKSEPRTRLLTPLSSPFSTKYPSNKSMSPK 65
           VEDFYRAHR LAER+D LKS+   RLL    SPFSTK+   K MS K
Sbjct: 66  VEDFYRAHRLLAERYDQLKSDSGNRLLATFGSPFSTKHRPEKLMSVK 112


>ref|XP_002320652.1| predicted protein [Populus trichocarpa] gi|222861425|gb|EEE98967.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -3

Query: 205 VEDFYRAHRCLAERFDMLKSEPRTRLLTPLSSPFSTKYPSNKSMS 71
           VEDFYRAHR LAER+D LKS+   RLL     PFSTK+   K +S
Sbjct: 68  VEDFYRAHRSLAERYDQLKSDSGNRLLATFGLPFSTKHRPEKLLS 112


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