BLASTX nr result

ID: Coptis21_contig00018618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018618
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252...   389   e-105
emb|CBI19420.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|2...   344   2e-92
ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797...   343   5e-92
ref|XP_002510115.1| transcription initiation factor, putative [R...   341   2e-91

>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
          Length = 922

 Score =  389 bits (998), Expect = e-105
 Identities = 226/447 (50%), Positives = 279/447 (62%), Gaps = 52/447 (11%)
 Frame = +3

Query: 3    QVRQV-LHQGSVPAQAGGTTQPMSSISMTNYEIQNSSSDPKRLHGGSMSHLTTNPTMQHN 179
            Q+RQV LHQ     Q GGT+Q M+ +S+  +E Q+S +DPKR+ GGS+ H + + T+Q +
Sbjct: 399  QMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQS 458

Query: 180  PVSWQSSMGKD------------------------LKAASSSTSFSAGRADLGNPVPA-- 281
             V WQSS  K+                        L    S +SF A + + GN +P   
Sbjct: 459  SVPWQSSTNKEQISSMAYVKQEPADQTNEQQQKSQLSTPQSLSSFPAVQVEKGNAIPGIL 518

Query: 282  ---------------------GTNSISSSMPTQLDH---LQVPXXXXXXXXXXXXXXPPK 389
                                   NS+SSSM T LD    L                 PPK
Sbjct: 519  KDESLEKQASRIGFSSSMSMLPPNSVSSSMGTHLDPNVTLGSRIPSVTSPVGINTRTPPK 578

Query: 390  KITIGQKKSFDALGTTSTQPSKKQKVSGALSDQSIEQLNDVTAVSGVNLREEEEQLFSGP 569
            K +IGQKK  +ALG++   PSKKQKVSGA  DQSIEQLNDVTAVSGVNLREEEEQLFSGP
Sbjct: 579  KPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGP 638

Query: 570  KDEGRTSEATRRVVQEEEERLILQKIPLQRKLAKIMSKSGIKSVSKDXXXXXXXXXXXXX 749
            K++ R SEA+RRVVQEEEERLILQK PLQ+KLA+IM++  +K++S D             
Sbjct: 639  KEDSRVSEASRRVVQEEEERLILQKAPLQKKLAEIMARCSLKNISNDVERCLSLCVEERL 698

Query: 750  XXXINNLVRVSKQRVDTERSRHRTIITSDVRRQILVMNRKAKEDWEKKQSEEAEKIRKVN 929
               I+NL+R+SKQR D E+ RHR+IITSD+R+QIL+MN KA+E+WEKKQ+ EAEK+RK+N
Sbjct: 699  RGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKAREEWEKKQA-EAEKLRKLN 757

Query: 930  EAEGNTGADGEKEKDEVRTKTFKVNKEEDDKMXXXXXXXXXXXXXGGDDMLSKWQLMAEQ 1109
            E EG+TG DG+K+KDE R K+ K NKEEDDKM             GGDDMLSKWQLMAEQ
Sbjct: 758  EPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARAAVGGDDMLSKWQLMAEQ 817

Query: 1110 ARQKRE-GVDTTSTIQIGKDVSRRSSS 1187
            ARQKRE G+D  S  Q GKD SR+ SS
Sbjct: 818  ARQKREGGIDAASGSQPGKDASRKLSS 844


>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  384 bits (986), Expect = e-104
 Identities = 218/404 (53%), Positives = 273/404 (67%), Gaps = 9/404 (2%)
 Frame = +3

Query: 3    QVRQV-LHQGSVPAQAGGTTQPMSSISMTNYEIQNSSSDPKRLHGGSMSHLTTNPTMQHN 179
            Q+RQV LHQ     Q GGT+Q M+ +S+  +E Q+S +DPKR+ GGS+ H + + T+Q +
Sbjct: 405  QMRQVPLHQNIGSTQMGGTSQAMNPMSVPKFERQSSVNDPKRVQGGSLPHPSNSSTLQQS 464

Query: 180  PVSWQSSMG----KDLKAASSSTSFSAGRADLGNPVPAGTNSISSSMPTQLDH---LQVP 338
                +S +     + L+  +S   FS+  + L        NS+SSSM T LD    L   
Sbjct: 465  SQQQKSQLSTPQNESLEKQASRIGFSSSMSMLP------PNSVSSSMGTHLDPNVTLGSR 518

Query: 339  XXXXXXXXXXXXXXPPKKITIGQKKSFDALGTTSTQPSKKQKVSGALSDQSIEQLNDVTA 518
                          PPKK +IGQKK  +ALG++   PSKKQKVSGA  DQSIEQLNDVTA
Sbjct: 519  IPSVTSPVGINTRTPPKKPSIGQKKPLEALGSSPPLPSKKQKVSGAFLDQSIEQLNDVTA 578

Query: 519  VSGVNLREEEEQLFSGPKDEGRTSEATRRVVQEEEERLILQKIPLQRKLAKIMSKSGIKS 698
            VSGVNLREEEEQLFSGPK++ R SEA+RRVVQEEEERLILQK PLQ+KLA+IM++  +K+
Sbjct: 579  VSGVNLREEEEQLFSGPKEDSRVSEASRRVVQEEEERLILQKAPLQKKLAEIMARCSLKN 638

Query: 699  VSKDXXXXXXXXXXXXXXXXINNLVRVSKQRVDTERSRHRTIITSDVRRQILVMNRKAKE 878
            +S D                I+NL+R+SKQR D E+ RHR+IITSD+R+QIL+MN KA+E
Sbjct: 639  ISNDVERCLSLCVEERLRGFISNLIRLSKQRADVEKPRHRSIITSDIRQQILIMNHKARE 698

Query: 879  DWEKKQSEEAEKIRKVNEAEGNTGADGEKEKDEVRTKTFKVNKEEDDKMXXXXXXXXXXX 1058
            +WEKKQ+ EAEK+RK+NE EG+TG DG+K+KDE R K+ K NKEEDDKM           
Sbjct: 699  EWEKKQA-EAEKLRKLNEPEGSTGVDGDKDKDEGRVKSLKANKEEDDKMRTTAANVAARA 757

Query: 1059 XXGGDDMLSKWQLMAEQARQKRE-GVDTTSTIQIGKDVSRRSSS 1187
              GGDDMLSKWQLMAEQARQKRE G+D  S  Q GKD SR+ SS
Sbjct: 758  AVGGDDMLSKWQLMAEQARQKREGGIDAASGSQPGKDASRKLSS 801


>ref|XP_002320699.1| predicted protein [Populus trichocarpa] gi|222861472|gb|EEE99014.1|
            predicted protein [Populus trichocarpa]
          Length = 875

 Score =  344 bits (883), Expect = 2e-92
 Identities = 204/426 (47%), Positives = 258/426 (60%), Gaps = 31/426 (7%)
 Frame = +3

Query: 3    QVRQVLHQGSVPA-QAGGTTQPMSSISMTNYEIQNSSSDPKRLHGGSMSHLTTNPTMQHN 179
            Q RQ+ H  ++   Q GG    M  IS   +E QNS+ DP R+H GS+SH T    +Q N
Sbjct: 371  QTRQIPHHQNLGVTQIGGPMHSM--ISTPKFERQNSADDPSRVHSGSVSHYTNKSALQQN 428

Query: 180  PVSWQSSMGKDLKAASSST------------SFSAGRADLGNPVPAGT------------ 287
               WQ+   ++   AS S+                 +  L +P                 
Sbjct: 429  SAPWQAPSNREKSPASFSSLNYVKPGLLEQAGEQQNKPQLSSPQDQSLDKQSTKIVFSTV 488

Query: 288  --NSISSSMPTQLD---HLQVPXXXXXXXXXXXXXXPPKKITIGQKKSFDALGTTSTQPS 452
              NS   S+ TQ+D                      PPKK ++GQKK F+ALG++    +
Sbjct: 489  PPNSAPPSIATQMDPNGQAGSRISSVASPAGVNARTPPKKPSVGQKKPFEALGSSPPAST 548

Query: 453  KKQKVSGALSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKDEGRTSEATRRVVQEEEERL 632
            KK KVSGA SDQSIEQLNDVTAVSGVNLREEEEQLFSGPK++ R SEA+RR VQEEEERL
Sbjct: 549  KKHKVSGAFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKEDSRVSEASRRFVQEEEERL 608

Query: 633  ILQKIPLQRKLAKIMSKSGIKSVSKDXXXXXXXXXXXXXXXXINNLVRVSKQRVDTERSR 812
            +LQK PL++KL +IM+K G+K+   D                I+N++R+SKQRVD E+ R
Sbjct: 609  MLQKTPLKKKLGEIMAKCGLKNFGTDVERCLSLCVEERMRGLISNMIRLSKQRVDAEKPR 668

Query: 813  HRTIITSDVRRQILVMNRKAKEDWEKKQSEEAEKIRKVNEAEGNTGADGEKEKDEVRTKT 992
            H+T+ITSDVR+QI+ MNRKA+E+ EKKQ+ EAEK++KVNE EG+ G +GEKEKDE R K+
Sbjct: 669  HQTLITSDVRQQIMTMNRKAQEELEKKQA-EAEKLQKVNEPEGDNGGEGEKEKDEGRVKS 727

Query: 993  FKVNKEEDDKMXXXXXXXXXXXXXGGDDMLSKWQLMAEQARQKRE-GVDTTSTIQIGKDV 1169
             KVNKEEDDKM             GGDD+LSKWQLMAEQARQKRE G++  S  Q  KDV
Sbjct: 728  VKVNKEEDDKMRTTAANVAARAAVGGDDILSKWQLMAEQARQKREGGMEGASGSQPVKDV 787

Query: 1170 SRRSSS 1187
            +R+  S
Sbjct: 788  NRKPLS 793


>ref|XP_003527732.1| PREDICTED: uncharacterized protein LOC100797127 [Glycine max]
          Length = 933

 Score =  343 bits (880), Expect = 5e-92
 Identities = 209/449 (46%), Positives = 265/449 (59%), Gaps = 55/449 (12%)
 Frame = +3

Query: 6    VRQVLHQGSVPAQAGGTTQPMSSISMTNYEIQNSSSDPKRLHGGSMSHLTTNPTMQHNPV 185
            +RQ+ HQ   P Q GG+TQ +  I +T  + QNS +DPKR+ GG +S +  N T Q    
Sbjct: 412  MRQIPHQSISPNQLGGSTQGL--IGLTKLDQQNSFNDPKRMPGGFVSPVANNTTSQQTSN 469

Query: 186  SWQSSMGKDLKAAS-----------------------------------------SSTSF 242
            SWQ S  K+  + S                                         SS + 
Sbjct: 470  SWQPSANKEQSSGSFSSVPYVKKEPNDLSTEQQHRHNLSKLHGLHSVNSVQNEQGSSANQ 529

Query: 243  SAGRADLGNPVPAGTN---SISSSMP--------TQLD-HLQVPXXXXXXXXXXXXXXPP 386
               + +     PA T+   + SS +P        +QLD    +               P 
Sbjct: 530  GTLKEEFSRGFPASTSMPHTTSSLLPLNSASPSVSQLDPSATLSPQIPSNTSVINARTPL 589

Query: 387  KKITIGQKKSFDALGTTSTQPSKKQKVSGALSDQSIEQLNDVTAVSGVNLREEEEQLFSG 566
            KK + GQKK  +ALG++   PSKKQKVSGA  + SIEQLNDVTAVSGV+LREEEEQLFSG
Sbjct: 590  KKPSPGQKKPIEALGSSPPPPSKKQKVSGASLEPSIEQLNDVTAVSGVDLREEEEQLFSG 649

Query: 567  PKDEGRTSEATRRVVQEEEERLILQKIPLQRKLAKIMSKSGIKSVSKDXXXXXXXXXXXX 746
            PK++ R SEA+RRVVQEEEE LILQK PLQRKL +I+++ G+K VS D            
Sbjct: 650  PKEDSRASEASRRVVQEEEESLILQKAPLQRKLIEIINECGLKGVSNDLERCLSLCVEER 709

Query: 747  XXXXINNLVRVSKQRVDTERSRHRTIITSDVRRQILVMNRKAKEDWEKKQSEEAEKIRKV 926
                I+N++R+SKQRVD E++ HRT++TSDVR+QIL MN+KA+E+WEKKQS E EK+RK+
Sbjct: 710  MRGVISNVIRMSKQRVDLEKTSHRTVVTSDVRQQILTMNKKAREEWEKKQS-ETEKLRKL 768

Query: 927  NEAEGNTGADGEKEKDEVRTKTFKVNKEEDDKMXXXXXXXXXXXXXGGDDMLSKWQLMAE 1106
            N+ +GN G DG+KEKDE RTK  KVNKE DDKM             GGDDMLSKWQLMAE
Sbjct: 769  NDVDGNAGIDGDKEKDEGRTKATKVNKEVDDKMRTNAANVAARAAVGGDDMLSKWQLMAE 828

Query: 1107 QARQKRE--GVDTTSTIQIGKDVSRRSSS 1187
            QARQK+   G+D +S  Q  KDVS++SSS
Sbjct: 829  QARQKKRGGGMDASSGSQPAKDVSQKSSS 857


>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
            gi|223550816|gb|EEF52302.1| transcription initiation
            factor, putative [Ricinus communis]
          Length = 925

 Score =  341 bits (875), Expect = 2e-91
 Identities = 202/448 (45%), Positives = 260/448 (58%), Gaps = 56/448 (12%)
 Frame = +3

Query: 3    QVRQVLHQGSVPAQAGGTTQPMSSISMTNYEIQNSSSDPKRLHGGSMSHLTTNPTMQHNP 182
            Q+RQ+ H      Q GG+T  ++ + ++ +E  NS SDP R+  GSMS       +  N 
Sbjct: 398  QMRQISHSTMASTQIGGSTPTLNMVHVSKFERPNSVSDPSRVQSGSMSQYNNKSALPQNS 457

Query: 183  VSWQSSMGKDLKAA-------------------------SSSTSFSAGRADLGNPVPAGT 287
            + WQ+   K+  +                          S+    SA   + GN VP  +
Sbjct: 458  IPWQAPTNKEQTSPLFPSTNYVKQEPLEQATDQQQKPQLSNPQGLSAAPGEQGNAVPVNS 517

Query: 288  -----------------------NSISSSMPTQLD-HLQVPXXXXXXXXXXXXXX--PPK 389
                                   NS+S S+  Q D ++Q                  P K
Sbjct: 518  KEDSLEKPSSKVGFSNPSTAVPSNSVSPSIAIQPDPNIQAGPRFPSGAASVGVNARTPTK 577

Query: 390  KITIGQKKSFDALGTTSTQPSKKQKVSGALSDQSIEQLNDVTAVSGVNLREEEEQLFSGP 569
            K++IGQKK  +ALG++    SKKQKVSGA  DQSIEQLNDVTAVSGVNLREEEEQLFSG 
Sbjct: 578  KLSIGQKKPLEALGSSPPMSSKKQKVSGAFLDQSIEQLNDVTAVSGVNLREEEEQLFSGS 637

Query: 570  KDEGRTSEATRRVVQEEEERLILQKIPLQRKLAKIMSKSGIKSVSKDXXXXXXXXXXXXX 749
            K++ R SEA+RRVVQEEEERLILQK PLQ+KLA+IM K G+K+++ D             
Sbjct: 638  KEDSRVSEASRRVVQEEEERLILQKTPLQKKLAEIMVKCGLKNINNDVERCLSLCVEERM 697

Query: 750  XXXINNLVRVSKQRVDTERSRHRTIITSDVRRQILVMNRKAKEDWEKKQSEEAEKIRKVN 929
               I+ L+R+SKQRVD E+SRHRT+ITSDVR+QI+ MN+KA+E+WE+KQ+ EAEK+RKVN
Sbjct: 698  RGLISTLIRLSKQRVDAEKSRHRTVITSDVRQQIMTMNQKAREEWERKQA-EAEKLRKVN 756

Query: 930  EAEGNTGADGEKEKDEVRTKTFK----VNKEEDDKMXXXXXXXXXXXXXGGDDMLSKWQL 1097
            E EG+ G +G+KEKD+ R K  K     NKEEDDKM             GGDD LSKWQL
Sbjct: 757  EPEGDNGVEGDKEKDDGRVKAIKGNIPANKEEDDKMRTTAANVAARAAVGGDDHLSKWQL 816

Query: 1098 MAEQARQKRE-GVDTTSTIQIGKDVSRR 1178
            MAEQARQKRE G++  S     K+V+R+
Sbjct: 817  MAEQARQKREGGIEAASGSYSAKEVTRK 844


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