BLASTX nr result

ID: Coptis21_contig00018589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018589
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    70   3e-10
ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g...    64   2e-08
ref|NP_001237460.1| uncharacterized protein LOC100500144 [Glycin...    60   2e-07

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
 Frame = -3

Query: 557 FSNVTRLRVTGIGPFNGSHLISLLRDMPDIESLSIEL--ENCTLGENFLTLATFPQHFLS 384
           F N+TRL    IG FN   L + L   P++E+L IE    N  + E +L     P   + 
Sbjct: 331 FHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTNELIPEGWLMPLQVPACLVL 390

Query: 383 HLKSVELSSPYRYDNELCIIKFLLQNARVLEKMTINCVTKLSADPSKQLEVCKKLLTFPR 204
           HLK +E+      D EL  +++LL+NA VL++MTI+C         ++  VCKKLL  PR
Sbjct: 391 HLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYM---DQEFCVCKKLLGLPR 447

Query: 203 FSARSVIAFS 174
            S    +  S
Sbjct: 448 GSRSCFVVSS 457


>ref|XP_003541805.1| PREDICTED: FBD-associated F-box protein At3g52670-like [Glycine
           max]
          Length = 639

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/112 (33%), Positives = 65/112 (58%)
 Frame = -3

Query: 509 GSHLISLLRDMPDIESLSIELENCTLGENFLTLATFPQHFLSHLKSVELSSPYRYDNELC 330
           G  L++LL + P + +L ++     L E+ LT A+ PQ FLS LK  +      +++EL 
Sbjct: 55  GEALLNLLHNSPMLNTLILQNGVFDLNEDMLTSASVPQCFLSSLKVFQFKGFNVHEHELL 114

Query: 329 IIKFLLQNARVLEKMTINCVTKLSADPSKQLEVCKKLLTFPRFSARSVIAFS 174
           + KF++ NA VLE+MT++    L        +V +++L+FP+ S+  +I FS
Sbjct: 115 LAKFVMANATVLERMTLSTAFWLQYSDIDMEKVKEQILSFPKRSSFVMIEFS 166


>ref|NP_001237460.1| uncharacterized protein LOC100500144 [Glycine max]
           gi|255629454|gb|ACU15073.1| unknown [Glycine max]
          Length = 171

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 37/123 (30%), Positives = 68/123 (55%)
 Frame = -3

Query: 542 RLRVTGIGPFNGSHLISLLRDMPDIESLSIELENCTLGENFLTLATFPQHFLSHLKSVEL 363
           RL    +    G  L+++L + P + +L ++     L ++ LT A+ PQ F S L+  + 
Sbjct: 44  RLASLQLNEVTGEALLNILHNSPFLNTLVLKNGVSELNKDVLTSASVPQCFQSSLRVFQF 103

Query: 362 SSPYRYDNELCIIKFLLQNARVLEKMTINCVTKLSADPSKQLEVCKKLLTFPRFSARSVI 183
                +++EL ++KF++ NA+VLEKMTI+    L    +   +V +++L+FP+ S   +I
Sbjct: 104 KEFNVHEHELLLLKFVMANAKVLEKMTIHTAFWLRYSDTDMEKVKEQILSFPKCSDFVMI 163

Query: 182 AFS 174
             S
Sbjct: 164 QLS 166


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