BLASTX nr result
ID: Coptis21_contig00018564
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018564
(1132 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi... 551 e-154
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi... 543 e-152
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2... 540 e-151
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi... 526 e-147
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi... 526 e-147
>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 551 bits (1419), Expect = e-154
Identities = 254/351 (72%), Positives = 308/351 (87%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH Y+LRRG DSILPV+++L+ MYA+CG LESG+ IFDRM K+D V WNS+I+ YG+HGY
Sbjct: 299 IHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGY 358
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTREHKVTPSREHYA 361
G +A++ F++M+ +G SPS I+F+SVLGACSH GLV EGK++F+SM +EH + PS EHYA
Sbjct: 359 GRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYA 418
Query: 362 CVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIHCNVELAERASTRLFELEPM 541
C+VDLLGRA RL+EAAK++E +RIEPGP VWGSLLGACRIHC+VELAERAS RLF+LEP
Sbjct: 419 CMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPT 478
Query: 542 NAGNYVLLADIYAAARMWEEVSKVKRVLEDRKLEKVPGCSWIEVKRKIYSFVSIDEMNPQ 721
NAGNYVLLADIYA A MW+EV +VK++L+ R+L+KVPG SWIEV+RKIYSF S+DE NPQ
Sbjct: 479 NAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIEVRRKIYSFTSVDEFNPQ 538
Query: 722 MEQLHALLVHLSSEMKEMGYIPETKVVLYDLDQVEKERILLGHSEKLAVAFGLINSGSGE 901
EQLHALLV+LS+EMK+ GY P+TK+VLYDLDQ EKERI+LGHSEKLAVAFGLIN+ G+
Sbjct: 539 GEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVLGHSEKLAVAFGLINTSKGD 598
Query: 902 TIRVTKNLRLCEDCHSVTKFISKFTEREIFVRDVNRIHHFREGYCSCNDYW 1054
TIR+TKNLRLCEDCHSVTKFISKF +REI VRD+NR HHF++G CSC DYW
Sbjct: 599 TIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649
Score = 84.0 bits (206), Expect = 6e-14
Identities = 50/165 (30%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH ++LR G+ + + V+ +LM+MYA+ G + +FD M ++ VSW++MI Y +G
Sbjct: 196 IHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGK 255
Query: 182 GIEAVEFFKDMVRN--GISPSIITFVSVLGACSHAGLVAEGKQIFDSMTRE--HKVTPSR 349
EA+E F++M+ N P+ +T VSVL AC+ + +GK I + R + P
Sbjct: 256 PYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPV- 314
Query: 350 EHYACVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIH 484
+ ++ + R G+LE + + M + +W SL+ + +H
Sbjct: 315 --ISALITMYARCGKLESGQLIFDRMH-KKDVVLWNSLISSYGLH 356
>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 543 bits (1398), Expect = e-152
Identities = 256/351 (72%), Positives = 305/351 (86%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
+H Y+LRRG DSILPVV++L+ +YA+CG+LE G ++F+RM KRD VSWNS+I+ YGIHG+
Sbjct: 308 MHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGF 367
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTREHKVTPSREHYA 361
G +A++ FK+M+ G+SPS I+FVSVLGACSHAGLV EGK +F+SM R HK+ PS EHYA
Sbjct: 368 GRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYA 427
Query: 362 CVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIHCNVELAERASTRLFELEPM 541
C+VDLLGRA RL+EAAK+++ MRIEPGP VWGSLLG+CRIHCNVELAERA++RLFELEP
Sbjct: 428 CMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPT 487
Query: 542 NAGNYVLLADIYAAARMWEEVSKVKRVLEDRKLEKVPGCSWIEVKRKIYSFVSIDEMNPQ 721
NAGNYVLLADIYA A+MW EV +VK +LE R L+KVPG S IE++RKIYSF+S+DE NPQ
Sbjct: 488 NAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQ 547
Query: 722 MEQLHALLVHLSSEMKEMGYIPETKVVLYDLDQVEKERILLGHSEKLAVAFGLINSGSGE 901
+EQLHALL+ LS EMKE GY+P+TKVVLYDLD EKERI+LGHSEKLA+AFGLINS GE
Sbjct: 548 IEQLHALLLKLSMEMKEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKGE 607
Query: 902 TIRVTKNLRLCEDCHSVTKFISKFTEREIFVRDVNRIHHFREGYCSCNDYW 1054
TIR+TKNLRLCEDCHSVTKFISKF REI VRDVNR H F++G CSC DYW
Sbjct: 608 TIRITKNLRLCEDCHSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658
Score = 84.3 bits (207), Expect = 5e-14
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH ++LR GF+ + ++ +L++MYA+ G + + ++FD+M ++ VSW++MI Y +G
Sbjct: 205 IHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKNGK 264
Query: 182 GIEAVEFFKDMV--RNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTRE--HKVTPSR 349
+EA+E F+ M+ + P+ +T VSVL AC+ + +GK + + R + P
Sbjct: 265 PLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILPV- 323
Query: 350 EHYACVVDLLGRAGRLEEAAKVVEGMRIEPGPDV--WGSLLGACRIH 484
+ +V + R G LE +V E M DV W SL+ + IH
Sbjct: 324 --VSALVTVYARCGNLELGHRVFERMEKR---DVVSWNSLISSYGIH 365
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 4/149 (2%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
+H +++ G D + L+NMY++ S+++ R++FD+ KR WN++ + GY
Sbjct: 100 LHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGY 159
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGAC----SHAGLVAEGKQIFDSMTREHKVTPSR 349
G E ++ ++ M R G+ T+ VL AC + L+ G++I + R H
Sbjct: 160 GREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILR-HGFEGHV 218
Query: 350 EHYACVVDLLGRAGRLEEAAKVVEGMRIE 436
++D+ R G + A++V + M ++
Sbjct: 219 HIMTTLLDMYARFGCVLNASRVFDQMPVK 247
>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
predicted protein [Populus trichocarpa]
Length = 650
Score = 540 bits (1392), Expect = e-151
Identities = 255/351 (72%), Positives = 300/351 (85%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH Y+LR+G DSILPV+++L+ MYA+CG LE G+++FD+M KRD VSWNS+I+ YG+HG+
Sbjct: 300 IHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGF 359
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTREHKVTPSREHYA 361
G +A+ F++M NG+ PS I+FVSVLGACSHAGLV EGK +F+SM H + PS EHYA
Sbjct: 360 GKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYA 419
Query: 362 CVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIHCNVELAERASTRLFELEPM 541
C+VDLLGRA RLEEAAK++E MRIEPGP VWGSLLG+CRIHCNVELAERAS RLF+LEP
Sbjct: 420 CMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPT 479
Query: 542 NAGNYVLLADIYAAARMWEEVSKVKRVLEDRKLEKVPGCSWIEVKRKIYSFVSIDEMNPQ 721
NAGNYVLLADIYA A MW+ V +VK++LE R L+KVPG SWIEVKRKIYSFVS+DE+NP+
Sbjct: 480 NAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIEVKRKIYSFVSVDEVNPR 539
Query: 722 MEQLHALLVHLSSEMKEMGYIPETKVVLYDLDQVEKERILLGHSEKLAVAFGLINSGSGE 901
MEQLHALLV LS E+KE GY+P+TKVVLYDL EKERI+LGHSEKLAVAFGLINS GE
Sbjct: 540 MEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERIVLGHSEKLAVAFGLINSSKGE 599
Query: 902 TIRVTKNLRLCEDCHSVTKFISKFTEREIFVRDVNRIHHFREGYCSCNDYW 1054
IR+TK+LRLCEDCHS TKFISKF +EI VRDVNR HHFR+G CSC DYW
Sbjct: 600 VIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650
Score = 84.7 bits (208), Expect = 4e-14
Identities = 50/167 (29%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH ++LR G+D + ++ +L++MYAK G + + +F++M ++ VSW++MI Y +G
Sbjct: 197 IHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGK 256
Query: 182 GIEAVEFFKDMV--RNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTRE--HKVTPSR 349
EA+E F++++ + P+ +T VSVL AC+ + +G+ I + R+ + P
Sbjct: 257 AFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPV- 315
Query: 350 EHYACVVDLLGRAGRLEEAAKVVEGMRIEPGPDV--WGSLLGACRIH 484
+ +V + R G+LE +V + M DV W SL+ + +H
Sbjct: 316 --ISALVTMYARCGKLELGQRVFDQM---DKRDVVSWNSLISSYGVH 357
>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 526 bits (1355), Expect = e-147
Identities = 242/351 (68%), Positives = 295/351 (84%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH Y+LRRG DSILPV+N+L+ MY +CG + G+++FD M RD VSWNS+I+ YG+HG+
Sbjct: 308 IHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVVSWNSLISIYGMHGF 367
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTREHKVTPSREHYA 361
G +A++ F++M+ G SPS I+F++VLGACSHAGLV EGK +F+SM ++++ P EHYA
Sbjct: 368 GKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 427
Query: 362 CVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIHCNVELAERASTRLFELEPM 541
C+VDLLGRA RL+EA K++E M EPGP VWGSLLG+CRIHCNVELAERAST LFELEP
Sbjct: 428 CMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTLLFELEPR 487
Query: 542 NAGNYVLLADIYAAARMWEEVSKVKRVLEDRKLEKVPGCSWIEVKRKIYSFVSIDEMNPQ 721
NAGNYVLLADIYA A+MW E V ++LE R L+K+PGCSWIEVKRK+YSFVS+DE NPQ
Sbjct: 488 NAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQ 547
Query: 722 MEQLHALLVHLSSEMKEMGYIPETKVVLYDLDQVEKERILLGHSEKLAVAFGLINSGSGE 901
+E++HALLV LS+EMK GY+P+T VVLYDLD+ EKERI+LGHSEKLAVAFGLIN+ GE
Sbjct: 548 IEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTVKGE 607
Query: 902 TIRVTKNLRLCEDCHSVTKFISKFTEREIFVRDVNRIHHFREGYCSCNDYW 1054
TIR+ KNLRLCEDCH+VTKFISKF REI VRDVNR HHF++G CSC DYW
Sbjct: 608 TIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658
Score = 70.5 bits (171), Expect = 7e-10
Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 6/167 (3%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH ++LR G+++ + V+ +L+++YAK GS+ +F M ++ VSW++MI + +
Sbjct: 205 IHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEM 264
Query: 182 GIEAVEFFKDMV--RNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTRE--HKVTPSR 349
++A+E F+ M+ + P+ +T V+VL AC+ + +GK I + R + P
Sbjct: 265 PMKALELFQLMMLEAHDSVPNSVTMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVL 324
Query: 350 EHYACVVDLLGRAGRLEEAAKVVEGMRIEPGPDV--WGSLLGACRIH 484
++ + GR G + +V + M+ DV W SL+ +H
Sbjct: 325 N---ALITMYGRCGEILMGQRVFDNMK---NRDVVSWNSLISIYGMH 365
>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 658
Score = 526 bits (1354), Expect = e-147
Identities = 242/351 (68%), Positives = 295/351 (84%)
Frame = +2
Query: 2 IHCYVLRRGFDSILPVVNSLMNMYAKCGSLESGRQIFDRMVKRDTVSWNSMITGYGIHGY 181
IH Y+LRR DSILPV+N+L+ MY +CG + G+++FD M KRD VSWNS+I+ YG+HG+
Sbjct: 308 IHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGF 367
Query: 182 GIEAVEFFKDMVRNGISPSIITFVSVLGACSHAGLVAEGKQIFDSMTREHKVTPSREHYA 361
G +A++ F++M+ G+SPS I+F++VLGACSHAGLV EGK +F+SM ++++ P EHYA
Sbjct: 368 GKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 427
Query: 362 CVVDLLGRAGRLEEAAKVVEGMRIEPGPDVWGSLLGACRIHCNVELAERASTRLFELEPM 541
C+VDLLGRA RL EA K++E M EPGP VWGSLLG+CRIHCNVELAERAST LFELEP
Sbjct: 428 CMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIHCNVELAERASTVLFELEPR 487
Query: 542 NAGNYVLLADIYAAARMWEEVSKVKRVLEDRKLEKVPGCSWIEVKRKIYSFVSIDEMNPQ 721
NAGNYVLLADIYA A++W E V ++LE R L+K+PGCSWIEVKRK+YSFVS+DE NPQ
Sbjct: 488 NAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSWIEVKRKVYSFVSVDEHNPQ 547
Query: 722 MEQLHALLVHLSSEMKEMGYIPETKVVLYDLDQVEKERILLGHSEKLAVAFGLINSGSGE 901
+E++HALLV LS+EMK GY+P+T VVLYDLD+ EKERI+LGHSEKLAVAFGLIN+ GE
Sbjct: 548 IEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVLGHSEKLAVAFGLINTAKGE 607
Query: 902 TIRVTKNLRLCEDCHSVTKFISKFTEREIFVRDVNRIHHFREGYCSCNDYW 1054
TIR+ KNLRLCEDCH+VTKFISKF REI VRDVNR HHFR+G CSC DYW
Sbjct: 608 TIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFRDGVCSCGDYW 658