BLASTX nr result

ID: Coptis21_contig00018560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018560
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-10
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    70   8e-10
ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223...    66   8e-10
emb|CCI61487.1| unnamed protein product [Arabidopsis halleri]          64   2e-09
ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]...    64   9e-09

>ref|XP_002304990.1| predicted protein [Populus trichocarpa] gi|222847954|gb|EEE85501.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 67.0 bits (162), Expect(2) = 1e-10
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
 Frame = +1

Query: 442 GKSRTSRVGATYGDHNGEFLLVSCKGLGVETNYVAECYAILENAEVTIEKGWLNLWLESD 621
           G +  + +G  + +H  EFLL   + +G  T+ +AE  A+    E+ +E GW N+WLE D
Sbjct: 53  GTAGKASIGGVFRNHEAEFLLGYAEPIGGTTSTIAELAALRRGLELVLENGWSNVWLEGD 112

Query: 622 SAAAIEAFSTGK-VPWQLSKR----*GWCKSKLQRCMLSHTWREANFEADIVAKRGSRLD 786
           S + ++     K V  + ++R          +LQ C+++H +RE N  AD +A+ G +L 
Sbjct: 113 SKSLVDIIVKRKQVRCKEAQRQVSHINLIMPELQNCVVTHVFREGNRAADKLARIGHQLQ 172

Query: 787 KDDV 798
           K  +
Sbjct: 173 KPKI 176



 Score = 26.2 bits (56), Expect(2) = 1e-10
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 389 WLLPEIDQVKVNVDGSSMGNPGPA 460
           W  P+I   K+N DGS  G  G A
Sbjct: 35  WKKPQIGWTKLNFDGSCKGTAGKA 58


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 70.1 bits (170), Expect = 8e-10
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
 Frame = +1

Query: 454 TSRVGATYGDHNGEFLLVSCKGLGVETNYVAECYAILENAEVTIEKGWLNLWLESDSAAA 633
           +S  G  + D N  FL    K LG  + Y  E  AI+   E+  ++ W N+W+ESDSA  
Sbjct: 245 SSSCGGVFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALV 304

Query: 634 IEAF-STGKVPWQLSKR*GWCKSKLQRC--MLSHTWREANFEADIVAKRGSRLDKDDVSV 804
           + AF     +P +L  R   C+  L R   +++H +RE N  AD +A +G  LD + V++
Sbjct: 305 VMAFKKMSMIPCRLRNRWINCRKLLCRMNFVITHIYREDNRCADKLASKG--LDIEGVTI 362

Query: 805 YVDIP 819
           ++++P
Sbjct: 363 WLNMP 367


>ref|XP_002524702.1| nuclease, putative [Ricinus communis] gi|223536063|gb|EEF37721.1|
           nuclease, putative [Ricinus communis]
          Length = 201

 Score = 65.9 bits (159), Expect(2) = 8e-10
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
 Frame = +1

Query: 442 GKSRTSRVGATYGDHNGEFLLVSCKGLGVETNYVAECYAILENAEVTIEKGWLNLWLESD 621
           G+     +G  + +H  EFLL   + +G  T+ +AE  A+    E+ +E GW N+WLE D
Sbjct: 52  GREGKGSIGGVFRNHKAEFLLGYAESIGRSTSTIAELAALRRGLELVLENGWSNVWLEGD 111

Query: 622 SAAAIEAF-STGKVPWQLSKR----*GWCKSKLQRCMLSHTWREANFEADIVAKRGSRLD 786
           +   +E      KV     +R          +L  C++SH +RE N  AD +A+ G +L 
Sbjct: 112 AKTLLEIIVKRRKVRCAQMQRHVSDINLIIPELDNCIVSHVYREGNRAADKLAQIGHQLQ 171

Query: 787 KDDV 798
           K  +
Sbjct: 172 KPKI 175



 Score = 24.3 bits (51), Expect(2) = 8e-10
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 389 WLLPEIDQVKVNVDGSSMGNPG 454
           W  P++   K+N DGS  G  G
Sbjct: 34  WEKPQVGWTKLNFDGSCKGREG 55


>emb|CCI61487.1| unnamed protein product [Arabidopsis halleri]
          Length = 195

 Score = 64.3 bits (155), Expect(2) = 2e-09
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
 Frame = +1

Query: 442 GKSRTSRVGATYGDHNGEFLLVSCKGLGVETNYVAECYAILENAEVTIEKGWLNLWLESD 621
           G+   + +G  + +H  EFLL   + +G  T+ +AE  A+    E+ +E GW +LWLE D
Sbjct: 46  GREGQASIGGIFRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELVLENGWTDLWLEGD 105

Query: 622 SAAAIEAFS-TGKVPWQLSKR----*GWCKSKLQRCMLSHTWREANFEADIVAKRGSRLD 786
           +   ++  S  GK+  + + +           L  C+LSH +RE N  AD +AK G +  
Sbjct: 106 AKIIMDIISKRGKLRCEKTNKHVNYINVVMPGLSNCVLSHVYREGNRVADKLAKLGHQFQ 165

Query: 787 KDDV 798
              V
Sbjct: 166 DPKV 169



 Score = 24.3 bits (51), Expect(2) = 2e-09
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 389 WLLPEIDQVKVNVDGSSMGNPGPA 460
           W  PEI  +K+N DG S G  G A
Sbjct: 29  WKKPEIGWIKLNFDG-SRGREGQA 51


>ref|XP_002869889.1| At4g21420 [Arabidopsis lyrata subsp. lyrata]
           gi|297315725|gb|EFH46148.1| At4g21420 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 201

 Score = 63.5 bits (153), Expect(2) = 9e-09
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
 Frame = +1

Query: 442 GKSRTSRVGATYGDHNGEFLLVSCKGLGVETNYVAECYAILENAEVTIEKGWLNLWLESD 621
           G+   + +G  + +H  EFLL   + +G  T+ +AE  A+    E+ +E GW ++WLE D
Sbjct: 52  GREGQASIGGIFRNHKAEFLLGYSESIGEATSTMAEFAALKRGLELVLENGWTDIWLEGD 111

Query: 622 SAAAIEAFS-TGKVPWQLSKR----*GWCKSKLQRCMLSHTWREANFEADIVAKRGSRLD 786
           +   ++  S  G++  + + +          +L  C+LSH +RE N  AD +AK G +  
Sbjct: 112 AKIIMDIISKRGRLRCERTNKHVNYINVVMPELSNCVLSHVYREGNRVADKLAKLGHQFQ 171

Query: 787 KDDV 798
              V
Sbjct: 172 DPKV 175



 Score = 23.1 bits (48), Expect(2) = 9e-09
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 389 WLLPEIDQVKVNVDGSSMGNPGPA 460
           W  P+I  +K+N DG S G  G A
Sbjct: 35  WKKPQIGWIKLNFDG-SRGREGQA 57


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