BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018558
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18563.3| unnamed protein product [Vitis vinifera]               71   9e-11
ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...    66   3e-09
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]    66   3e-09
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...    60   2e-07
ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu...    55   7e-06

>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 71.2 bits (173), Expect = 9e-11
 Identities = 38/83 (45%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
 Frame = +1

Query: 304 KRKVEMIQELFGGGASLVGGERKFSFNGAVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXX 483
           KRK  MIQEL GGGA L+GGERK + NG +LE                            
Sbjct: 69  KRKKRMIQELLGGGAGLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAA 128

Query: 484 XD---QQNLRCPRCDSSNTKFCY 543
                 +NLRCPRCDSSNTKFCY
Sbjct: 129 TTSSASENLRCPRCDSSNTKFCY 151


>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/78 (44%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
 Frame = +1

Query: 319 MIQELFGGGASLVGGERKFSFNGAVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--- 489
           MIQEL GGGA L+GGERK + NG +LE                                 
Sbjct: 1   MIQELLGGGAGLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAATTSSA 60

Query: 490 QQNLRCPRCDSSNTKFCY 543
            +NLRCPRCDSSNTKFCY
Sbjct: 61  SENLRCPRCDSSNTKFCY 78


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/78 (44%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
 Frame = +1

Query: 319 MIQELFGGGASLVGGERKFSFNGAVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--- 489
           MIQEL GGGA L+GGERK + NG +LE                                 
Sbjct: 1   MIQELLGGGAGLIGGERKITINGGILEASPSPSPSPSPSSSSSGNTTTVTTAAAATTSSA 60

Query: 490 QQNLRCPRCDSSNTKFCY 543
            +NLRCPRCDSSNTKFCY
Sbjct: 61  SENLRCPRCDSSNTKFCY 78


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/80 (43%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
 Frame = +1

Query: 319 MIQELFGGGASLVGGERKFSFNGAVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--- 489
           MIQEL GG A L+GGERK   N  +LEG                                
Sbjct: 1   MIQELLGG-AGLIGGERKIPINATILEGTPSPSPSLSPSPSPSSSTTSAATTSATNSTPS 59

Query: 490 --QQNLRCPRCDSSNTKFCY 543
             Q+NLRCPRCDSSNTKFCY
Sbjct: 60  SAQENLRCPRCDSSNTKFCY 79


>ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis]
           gi|223538418|gb|EEF40024.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 335

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 34/84 (40%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
 Frame = +1

Query: 319 MIQELFGGGASLVGGERKFSFNGAVLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXD--- 489
           MIQEL GG A L+GGE K S  G +LEG                                
Sbjct: 1   MIQELLGG-AGLIGGETKISIAGTILEGTPSHSPSLSPSSSTTTTSATAATATATTTTAN 59

Query: 490 ------QQNLRCPRCDSSNTKFCY 543
                  +NLRCPRCDSSNTKFCY
Sbjct: 60  STTSSTSENLRCPRCDSSNTKFCY 83