BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018544
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   240   2e-61
emb|CBI17228.3| unnamed protein product [Vitis vinifera]              240   2e-61
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   207   2e-51
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   193   3e-47
gb|ABK26521.1| unknown [Picea sitchensis]                             162   5e-38

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein At1g04840-like
            [Vitis vinifera]
          Length = 677

 Score =  240 bits (612), Expect = 2e-61
 Identities = 121/226 (53%), Positives = 144/226 (63%), Gaps = 55/226 (24%)
 Frame = -3

Query: 704  WSL*RQGWAMHGCSELALQC-----------------------------------FQDMK 630
            WS+   GWA+HGC + ALQC                                   F+ M+
Sbjct: 374  WSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMR 433

Query: 629  --------------------NKGQLEEAFKFIESMPINTDFVVWGALFCACRAHRNIKMA 510
                                  G+L+EA  FI+SMPIN DFV+WGALFCACRAH+NI+MA
Sbjct: 434  LDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMA 493

Query: 509  ELTTEKLLQLEPRHPGSYVFLSNIYAGVGRWQDVEKVRQSMKTKGIEKPPGWSYIEVEGT 330
            ELT EKLLQLEP+HPGSYVFLSN+YA VGRW+DVE+VR  MK +G+EK PGWSYIEVEG 
Sbjct: 494  ELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQ 553

Query: 329  VHSFVAGDQAHQRAKEVYAKLEDLLKSARAKGYMPNTEWVLHNIEE 192
            VHSFVAGD AH RA+E+  KLE++  SA+ +GYMP T WVLHNIEE
Sbjct: 554  VHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEE 599


>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  240 bits (612), Expect = 2e-61
 Identities = 121/226 (53%), Positives = 144/226 (63%), Gaps = 55/226 (24%)
 Frame = -3

Query: 704 WSL*RQGWAMHGCSELALQC-----------------------------------FQDMK 630
           WS+   GWA+HGC + ALQC                                   F+ M+
Sbjct: 287 WSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMR 346

Query: 629 --------------------NKGQLEEAFKFIESMPINTDFVVWGALFCACRAHRNIKMA 510
                                 G+L+EA  FI+SMPIN DFV+WGALFCACRAH+NI+MA
Sbjct: 347 LDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCACRAHKNIEMA 406

Query: 509 ELTTEKLLQLEPRHPGSYVFLSNIYAGVGRWQDVEKVRQSMKTKGIEKPPGWSYIEVEGT 330
           ELT EKLLQLEP+HPGSYVFLSN+YA VGRW+DVE+VR  MK +G+EK PGWSYIEVEG 
Sbjct: 407 ELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPGWSYIEVEGQ 466

Query: 329 VHSFVAGDQAHQRAKEVYAKLEDLLKSARAKGYMPNTEWVLHNIEE 192
           VHSFVAGD AH RA+E+  KLE++  SA+ +GYMP T WVLHNIEE
Sbjct: 467 VHSFVAGDHAHVRAEEISLKLEEITASAKQEGYMPETAWVLHNIEE 512


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  207 bits (526), Expect = 2e-51
 Identities = 95/149 (63%), Positives = 115/149 (77%)
 Frame = -3

Query: 623 GQLEEAFKFIESMPINTDFVVWGALFCACRAHRNIKMAELTTEKLLQLEPRHPGSYVFLS 444
           G+L+EA KFI +MPI  DFVVWGALFCACR H+N++MAEL ++KLLQLEP+HPGSYVFLS
Sbjct: 458 GRLDEALKFIRAMPITPDFVVWGALFCACRTHKNVEMAELASKKLLQLEPKHPGSYVFLS 517

Query: 443 NIYAGVGRWQDVEKVRQSMKTKGIEKPPGWSYIEVEGTVHSFVAGDQAHQRAKEVYAKLE 264
           N YA VGRW D E+VR SM+  G  K PGWS+IEV+  +H FVAGD  H RA E+Y+KL+
Sbjct: 518 NAYASVGRWDDAERVRVSMRDHGAHKDPGWSFIEVDHKLHRFVAGDNTHNRAVEIYSKLD 577

Query: 263 DLLKSARAKGYMPNTEWVLHNIEEVDGRE 177
           ++  SAR KGY    E VLHNIEE +  E
Sbjct: 578 EISASAREKGYTKEIECVLHNIEEEEKEE 606


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
            predicted protein [Populus trichocarpa]
          Length = 719

 Score =  193 bits (490), Expect = 3e-47
 Identities = 92/178 (51%), Positives = 128/178 (71%), Gaps = 4/178 (2%)
 Frame = -3

Query: 623  GQLEEAFKFIESMPINTDFVVWGALFCACRAHRNIKMAELTTEKLLQLEPRHPGSYVFLS 444
            GQL+EA +FIE MP+N DFV+WGALFCACRAH+  KMA+    KLL+LEP H G+Y+FLS
Sbjct: 498  GQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNYIFLS 557

Query: 443  NIYAGVGRWQDVEKVRQSMKTKGIEKPPGWSYIEVEGTVHSFVAGDQAHQRAKEVYAKLE 264
            N YA +G+W+D E+VR  M+ +G+ K  GWS IEVEG VH FV+GD  H+ +K +  KLE
Sbjct: 558  NAYAALGQWEDAERVRVLMQNRGVHKNSGWSCIEVEGQVHRFVSGDHDHKDSKAICLKLE 617

Query: 263  DLLKSARAKGYMPNTEWVLHNIEEVDGRE--GRNG*VLSLRCSMMVCIS--MSVGFVK 102
            +++  A  +GY+P TEWVLHN+E+ +  +  G +G  L+L  + ++C S  M++  VK
Sbjct: 618  EIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFA-LICTSPGMTIRIVK 674


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  162 bits (411), Expect = 5e-38
 Identities = 78/164 (47%), Positives = 107/164 (65%), Gaps = 3/164 (1%)
 Frame = -3

Query: 674 HGCSELA--LQCFQDMKNK-GQLEEAFKFIESMPINTDFVVWGALFCACRAHRNIKMAEL 504
           HG S  A    C  D+  + G L+EA  FI  MP+  +  VWG+L  ACR H NI++AE 
Sbjct: 129 HGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAER 188

Query: 503 TTEKLLQLEPRHPGSYVFLSNIYAGVGRWQDVEKVRQSMKTKGIEKPPGWSYIEVEGTVH 324
             E+L++L P +PG+YV LSNIYA  GRW D  KVR+ MK + ++K PG S+IEV+  VH
Sbjct: 189 AVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSWIEVQNKVH 248

Query: 323 SFVAGDQAHQRAKEVYAKLEDLLKSARAKGYMPNTEWVLHNIEE 192
            F+ GD +H + +E+Y  LE L    +A GY+PNT +VLH++EE
Sbjct: 249 PFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEE 292