BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018536
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vit...   261   2e-67
emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]   261   3e-67
emb|CBI40154.3| unnamed protein product [Vitis vinifera]              260   3e-67
ref|XP_002303924.1| chromatin remodeling complex subunit [Populu...   248   2e-63
ref|XP_002513066.1| conserved hypothetical protein [Ricinus comm...   239   8e-61

>ref|XP_002266009.2| PREDICTED: F-box protein At3g54460-like [Vitis vinifera]
          Length = 1408

 Score =  261 bits (668), Expect = 2e-67
 Identities = 148/344 (43%), Positives = 198/344 (57%)
 Frame = -3

Query: 1034 NPIMQKSSITEEESIQQNHKLCGFLRIIXXXXXXXXXXXXXXXLPFATFCYLNNTDDELS 855
            NP +Q   + E++    +HK CGFL  +                   T C++     E+ 
Sbjct: 48   NPNLQ---MVEDDHSIPHHKHCGFLSAVLAINPPQTLDS-------GTRCHIFGDGSEVG 97

Query: 854  FRTEENVVLFMIHNNRNGDLELEEFEEGTTSDVLGTSLGKRKVLESGVSXXXXXKRGRYG 675
            FR+E +V+L  + +                     TS G     +SG       KRG  G
Sbjct: 98   FRSENDVILSPVDSKAK------------------TSTG-----DSGECSRRKRKRG-IG 133

Query: 674  VVDEKISVVQQLWDLKMNKCIEIVARXXXXXXXXXXXXXXXXXXXXXXXVYLPLALWSGW 495
            +V   ISVV+Q+  L ++KC++IVAR                        YLP+ LWSGW
Sbjct: 134  LVHGSISVVRQIHALVVHKCVKIVARVVRVCGEARAVVLVDV--------YLPIELWSGW 185

Query: 494  QFPKSKAMAASLFRHLSCNWDQRKVILSNSEKYIKLMHEDDQSIWNHSDCHVLECKIHHN 315
            QFP+S + A +LFRHLSC+W++R  +L N E+Y K    D++S+WN SDCHVL CK+H N
Sbjct: 186  QFPRSASTAGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCN 245

Query: 314  VTGSCKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALG 135
                 KK+LFELHEIFKSLP VA +G+  S+R++    S  SGIW+++DD L+N+LTAL 
Sbjct: 246  ALDPSKKKLFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALA 305

Query: 134  PMDLFRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRE 3
            PMDL R+SATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RE
Sbjct: 306  PMDLVRVSATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRE 349


>emb|CAN81112.1| hypothetical protein VITISV_032626 [Vitis vinifera]
          Length = 1208

 Score =  261 bits (666), Expect = 3e-67
 Identities = 145/336 (43%), Positives = 194/336 (57%)
 Frame = -3

Query: 1010 ITEEESIQQNHKLCGFLRIIXXXXXXXXXXXXXXXLPFATFCYLNNTDDELSFRTEENVV 831
            + E++    +HK CGFL  +                   T C++     E+ FR+E +V+
Sbjct: 1    MVEDDDSIPDHKHCGFLSAVLAINPPQTLDS-------GTRCHIFGDGSEVGFRSENDVI 53

Query: 830  LFMIHNNRNGDLELEEFEEGTTSDVLGTSLGKRKVLESGVSXXXXXKRGRYGVVDEKISV 651
            L  + +                     TS G     +SG       KRG  G+V   ISV
Sbjct: 54   LSPVDSKAK------------------TSTG-----DSGECSRRKRKRG-IGLVHGSISV 89

Query: 650  VQQLWDLKMNKCIEIVARXXXXXXXXXXXXXXXXXXXXXXXVYLPLALWSGWQFPKSKAM 471
            V+Q+  L ++KC++IVAR                        YLP+ LWSGWQFP+S + 
Sbjct: 90   VRQIHALVVHKCVKIVARVVRVCGEARAVVLVDV--------YLPIELWSGWQFPRSAST 141

Query: 470  AASLFRHLSCNWDQRKVILSNSEKYIKLMHEDDQSIWNHSDCHVLECKIHHNVTGSCKKR 291
            A +LFRHLSC+W++R  +L N E+Y K    D++S+WN SDCHVL CK+H N     KK+
Sbjct: 142  AGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKK 201

Query: 290  LFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALGPMDLFRLS 111
            LFELHEIFKSLP VA +G+  S+R++    S  SGIW+++DD L+N+LTAL PMDL R+S
Sbjct: 202  LFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLVRVS 261

Query: 110  ATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRE 3
            ATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RE
Sbjct: 262  ATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRE 297


>emb|CBI40154.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  260 bits (665), Expect = 3e-67
 Identities = 145/336 (43%), Positives = 194/336 (57%)
 Frame = -3

Query: 1010 ITEEESIQQNHKLCGFLRIIXXXXXXXXXXXXXXXLPFATFCYLNNTDDELSFRTEENVV 831
            + E++    +HK CGFL  +                   T C++     E+ FR+E +V+
Sbjct: 1    MVEDDHSIPHHKHCGFLSAVLAINPPQTLDS-------GTRCHIFGDGSEVGFRSENDVI 53

Query: 830  LFMIHNNRNGDLELEEFEEGTTSDVLGTSLGKRKVLESGVSXXXXXKRGRYGVVDEKISV 651
            L  + +                     TS G     +SG       KRG  G+V   ISV
Sbjct: 54   LSPVDSKAK------------------TSTG-----DSGECSRRKRKRG-IGLVHGSISV 89

Query: 650  VQQLWDLKMNKCIEIVARXXXXXXXXXXXXXXXXXXXXXXXVYLPLALWSGWQFPKSKAM 471
            V+Q+  L ++KC++IVAR                        YLP+ LWSGWQFP+S + 
Sbjct: 90   VRQIHALVVHKCVKIVARVVRVCGEARAVVLVDV--------YLPIELWSGWQFPRSAST 141

Query: 470  AASLFRHLSCNWDQRKVILSNSEKYIKLMHEDDQSIWNHSDCHVLECKIHHNVTGSCKKR 291
            A +LFRHLSC+W++R  +L N E+Y K    D++S+WN SDCHVL CK+H N     KK+
Sbjct: 142  AGALFRHLSCDWEERSSVLVNHEEYYKYNDGDNRSLWNLSDCHVLGCKLHCNALDPSKKK 201

Query: 290  LFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALGPMDLFRLS 111
            LFELHEIFKSLP VA +G+  S+R++    S  SGIW+++DD L+N+LTAL PMDL R+S
Sbjct: 202  LFELHEIFKSLPSVAMKGQPDSSRVKPSDASCQSGIWEVSDDVLINILTALAPMDLVRVS 261

Query: 110  ATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRE 3
            ATC HLRSL+ SIMPCMKLKLFPHQ  AV+WML+RE
Sbjct: 262  ATCHHLRSLAASIMPCMKLKLFPHQHAAVEWMLQRE 297


>ref|XP_002303924.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222841356|gb|EEE78903.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1333

 Score =  248 bits (633), Expect = 2e-63
 Identities = 143/340 (42%), Positives = 201/340 (59%), Gaps = 14/340 (4%)
 Frame = -3

Query: 980 HKLCGFLRIIXXXXXXXXXXXXXXXLPFATFCYL--NNTDDELSFRTEENVVLFMIHN-- 813
           HKLCG+L  +                PF + C+L  + +  ++ F++  +VVL  + N  
Sbjct: 12  HKLCGYLCTVLTSPHPL---------PFLSHCHLITDGSHQQIRFKSLNDVVLSPLSNPY 62

Query: 812 NRNGDLELEEFEEGTTSDVLGTSLGKRKVL--------ESGVSXXXXXKRGR--YGVVDE 663
            +NG + L+E      S+ +G    K+K +        +SG S     + GR   G+V+ 
Sbjct: 63  GQNGAVSLQE-----NSNAVGKKTKKKKRMAKRGSCLKKSGNSVAEKKRVGRRVIGMVNG 117

Query: 662 KISVVQQLWDLKMNKCIEIVARXXXXXXXXXXXXXXXXXXXXXXXVYLPLALWSGWQFPK 483
            +SVV Q+  L M+KC++I+AR                        YLP+++WSG QFPK
Sbjct: 118 SVSVVHQIRALVMHKCVKILARVLHVAESEGEVVEVRVVVLVDV--YLPVSVWSGGQFPK 175

Query: 482 SKAMAASLFRHLSCNWDQRKVILSNSEKYIKLMHEDDQSIWNHSDCHVLECKIHHNVTGS 303
           S  +A SLFRHLSC+W++R+ +L +  +Y K    D +SIWN S CHVL C +H +V  S
Sbjct: 176 SGPIAGSLFRHLSCDWEKRRSMLVDGGEYFKNALGDHRSIWNLSGCHVLGCNLHCDVPDS 235

Query: 302 CKKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALGPMDL 123
             K+ FELHEIFK LP    + ++ S+R++    SL SGIWDLT D LM++L+ALGP DL
Sbjct: 236 SSKKRFELHEIFKGLPSTENKEQYYSSRVKPADNSLESGIWDLTGDILMSILSALGPKDL 295

Query: 122 FRLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRE 3
            R++ATC HLRSL+ SIMPCMKLKLFPHQQ AV+WML+RE
Sbjct: 296 VRVAATCHHLRSLAVSIMPCMKLKLFPHQQAAVEWMLQRE 335


>ref|XP_002513066.1| conserved hypothetical protein [Ricinus communis]
            gi|223548077|gb|EEF49569.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1322

 Score =  239 bits (610), Expect = 8e-61
 Identities = 137/339 (40%), Positives = 189/339 (55%), Gaps = 6/339 (1%)
 Frame = -3

Query: 1001 EESIQQNHKLCGFL-RIIXXXXXXXXXXXXXXXLPFATFCYLNNTD-DELSFRTEENVVL 828
            EE    NHKLCG+L  ++                PF  F     TD  E+ F++E  VVL
Sbjct: 2    EEDPYPNHKLCGYLCTVLSLPSPQQPGPSLSFLSPFHVF-----TDGSEIVFKSEHGVVL 56

Query: 827  FMIHNNRNGDLELEEFEEGTTSDVLGTSLGKRKVLESGVSXXXXXKRGRYGVVDEKISVV 648
            F   N +               + +   +  R+  + G+           G+V+  +SVV
Sbjct: 57   FPFTNQKTHSSSSSSSLSSPLQNEVNGEITSRRKFKRGI-----------GMVNGSLSVV 105

Query: 647  QQLWDLKMNKCIEIVARXXXXXXXXXXXXXXXXXXXXXXXV-YLPLALWSGWQFPKSKAM 471
             Q+  L +NKCI+I+AR                         YLP+ LW+GWQF K  + 
Sbjct: 106  NQIHALVVNKCIKIIARVLKVEEDYSNSNNKDARAVVVLVDVYLPIELWTGWQFTKCGST 165

Query: 470  AASLFRHLSCNWDQRKVILSNSEKYIKLMHEDD---QSIWNHSDCHVLECKIHHNVTGSC 300
            AA+LFRHLS +W +R ++L +  +Y K    DD    SIWN SDCHV+ C++H +V  S 
Sbjct: 166  AAALFRHLSYDWGKRSLLLVDGGEYCK----DDGGSMSIWNLSDCHVIGCQLHCSVPDST 221

Query: 299  KKRLFELHEIFKSLPGVAKEGKFLSTRIRQEGVSLSSGIWDLTDDTLMNVLTALGPMDLF 120
            KKR FEL+EIFK LP V    K  S+R++ +  +  SGIWDLTDD L+N+L+ LGPMDL 
Sbjct: 222  KKRRFELNEIFKGLPSVTNREKLYSSRVKPDDDTYESGIWDLTDDILINILSVLGPMDLI 281

Query: 119  RLSATCRHLRSLSESIMPCMKLKLFPHQQGAVDWMLRRE 3
            R++ATC+HLR+L+ S+MP MKLKLFPHQ+ AV+WML+RE
Sbjct: 282  RVAATCQHLRTLAVSVMPSMKLKLFPHQEAAVEWMLQRE 320