BLASTX nr result

ID: Coptis21_contig00018534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018534
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22611.1| unknown [Picea sitchensis]                             115   5e-24
ref|XP_004149299.1| PREDICTED: cytochrome c-type biogenesis prot...   113   2e-23
ref|NP_001046539.1| Os02g0275100 [Oryza sativa Japonica Group] g...   112   3e-23
gb|EEC72904.1| hypothetical protein OsI_06730 [Oryza sativa Indi...   112   3e-23
ref|NP_001169212.1| uncharacterized protein LOC100383068 [Zea ma...   112   3e-23

>gb|ABK22611.1| unknown [Picea sitchensis]
          Length = 155

 Score =  115 bits (288), Expect = 5e-24
 Identities = 55/66 (83%), Positives = 62/66 (93%)
 Frame = +2

Query: 353 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 532
           K+  +DARARNISHNVRCTECG QSIEDSQADIAILLR++IRDEIR GKSDKEI+++LEK
Sbjct: 12  KKAEIDARARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIFQKLEK 71

Query: 533 DYGETV 550
           DYGETV
Sbjct: 72  DYGETV 77


>ref|XP_004149299.1| PREDICTED: cytochrome c-type biogenesis protein CcmH-like [Cucumis
           sativus] gi|449507764|ref|XP_004163124.1| PREDICTED:
           cytochrome c-type biogenesis protein CcmH-like [Cucumis
           sativus]
          Length = 158

 Score =  113 bits (283), Expect = 2e-23
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = +2

Query: 353 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 532
           K ++V+ARARNISHNVRC ECG QSIEDSQADIAILLR++IRDEIR GKSDK+IYK+LE 
Sbjct: 10  KTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKDIYKKLEN 69

Query: 533 DYGETV 550
           DYGET+
Sbjct: 70  DYGETI 75


>ref|NP_001046539.1| Os02g0275100 [Oryza sativa Japonica Group]
           gi|47848023|dbj|BAD21809.1| cytochrome c biogenesis
           protein-like [Oryza sativa Japonica Group]
           gi|47848060|dbj|BAD21845.1| cytochrome c biogenesis
           protein-like [Oryza sativa Japonica Group]
           gi|113536070|dbj|BAF08453.1| Os02g0275100 [Oryza sativa
           Japonica Group] gi|215769047|dbj|BAH01276.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222622594|gb|EEE56726.1| hypothetical protein
           OsJ_06229 [Oryza sativa Japonica Group]
          Length = 152

 Score =  112 bits (281), Expect = 3e-23
 Identities = 51/66 (77%), Positives = 63/66 (95%)
 Frame = +2

Query: 353 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 532
           +++I+++RARNISHNVRCTECG QSIEDSQADIAILLR++IRDEI+ GKSDKEIYK+L+ 
Sbjct: 9   QRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIYKKLQA 68

Query: 533 DYGETV 550
           DYGET+
Sbjct: 69  DYGETI 74


>gb|EEC72904.1| hypothetical protein OsI_06730 [Oryza sativa Indica Group]
          Length = 152

 Score =  112 bits (281), Expect = 3e-23
 Identities = 51/66 (77%), Positives = 63/66 (95%)
 Frame = +2

Query: 353 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 532
           +++I+++RARNISHNVRCTECG QSIEDSQADIAILLR++IRDEI+ GKSDKEIYK+L+ 
Sbjct: 9   QRQIIESRARNISHNVRCTECGSQSIEDSQADIAILLRKLIRDEIKSGKSDKEIYKKLQA 68

Query: 533 DYGETV 550
           DYGET+
Sbjct: 69  DYGETI 74


>ref|NP_001169212.1| uncharacterized protein LOC100383068 [Zea mays]
           gi|195613152|gb|ACG28406.1| cytochrome c-type biogenesis
           protein cycL precursor [Zea mays]
           gi|223975477|gb|ACN31926.1| unknown [Zea mays]
           gi|223975557|gb|ACN31966.1| unknown [Zea mays]
           gi|413936370|gb|AFW70921.1| cytochrome c-type biogenesis
           protein cycL isoform 1 [Zea mays]
           gi|413936371|gb|AFW70922.1| cytochrome c-type biogenesis
           protein cycL isoform 2 [Zea mays]
          Length = 152

 Score =  112 bits (281), Expect = 3e-23
 Identities = 52/66 (78%), Positives = 62/66 (93%)
 Frame = +2

Query: 353 KQRIVDARARNISHNVRCTECGGQSIEDSQADIAILLRQIIRDEIRGGKSDKEIYKRLEK 532
           +++I++ RARNISHNVRCTECG QSIEDSQAD+AILLR++IRDEI+ GKSDKEIYK+LE 
Sbjct: 9   QRQIIENRARNISHNVRCTECGSQSIEDSQADVAILLRKLIRDEIKAGKSDKEIYKKLED 68

Query: 533 DYGETV 550
           DYGETV
Sbjct: 69  DYGETV 74


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