BLASTX nr result

ID: Coptis21_contig00018531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018531
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49202.1| unknown [Lotus japonicus]                               67   2e-09
ref|XP_002325813.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853...    62   7e-08
gb|AAZ52752.1| hypothetical protein At5g05330 [Arabidopsis thali...    61   1e-07
gb|AAZ52750.1| hypothetical protein At5g05330 [Arabidopsis thali...    61   1e-07

>gb|AFK49202.1| unknown [Lotus japonicus]
          Length = 187

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/82 (47%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
 Frame = -1

Query: 228 KRVFGLLRAPDGSAFQHCDVCGVSVAVALYDMHECNSKPRFKRFKGGYQNQKI------- 70
           KRVF LLRAPDGSAFQ C++C VSVAVAL D+H C +K   K FKG    Q         
Sbjct: 9   KRVFPLLRAPDGSAFQICELCEVSVAVALADLHHCETKMASKIFKGKELMQHSPVKVEPK 68

Query: 69  IEEDIPFQDDDEADSEMVGKFD 4
            E     QDDD  + + +   D
Sbjct: 69  TEVKQEMQDDDPEEEQFMKDHD 90


>ref|XP_002325813.1| predicted protein [Populus trichocarpa] gi|222862688|gb|EEF00195.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 2/60 (3%)
 Frame = -1

Query: 234 T*KRVFGLLRAPDGSAFQHCDVCGVSVAVALYDMHEC--NSKPRFKRFKGGYQNQKIIEE 61
           T KRV G+ RAPDGSAF++C+ CGV VA+AL D+HEC   +K   KRFKG    Q ++++
Sbjct: 7   TRKRVRGIRRAPDGSAFENCNNCGVLVAIALADLHECEAGTKNNVKRFKGLDGKQNVVQQ 66


>ref|XP_003633450.1| PREDICTED: uncharacterized protein LOC100853686 [Vitis vinifera]
          Length = 267

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 34/59 (57%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = -1

Query: 237 VT*KRVF----GLLRAPDGSAFQHCDVCGVSVAVALYDMHECNSKPRFKRFKG--GYQN 79
           +T KRV     G  R PDGSAF+ C  CGVSVA+AL DMH+C  K   KRFKG  G QN
Sbjct: 6   ITRKRVHAIASGFRRGPDGSAFEKCHGCGVSVAIALADMHDCGLKRDVKRFKGQRGVQN 64


>gb|AAZ52752.1| hypothetical protein At5g05330 [Arabidopsis thaliana]
          Length = 125

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -1

Query: 234 T*KRVFGLLRAPDGSAFQHCDVCGVSVAVALYDMHECNSKPR-FKRFK 94
           T KRV  + RA DGSAF+ C+ CGV +A+ALYDMHEC  K R  KRFK
Sbjct: 39  TRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEKRREVKRFK 86


>gb|AAZ52750.1| hypothetical protein At5g05330 [Arabidopsis thaliana]
          Length = 130

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = -1

Query: 234 T*KRVFGLLRAPDGSAFQHCDVCGVSVAVALYDMHECNSKPR-FKRFK 94
           T KRV  + RA DGSAF+ C+ CGV +A+ALYDMHEC  K R  KRFK
Sbjct: 39  TRKRVQAVRRAADGSAFKKCEECGVMIAIALYDMHECGEKRREVKRFK 86


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