BLASTX nr result

ID: Coptis21_contig00018523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018523
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu...   166   3e-39
emb|CBI24756.3| unnamed protein product [Vitis vinifera]              151   9e-35
ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259...   151   9e-35
ref|XP_003554803.1| PREDICTED: uncharacterized protein LOC100813...   126   4e-27
ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207...   125   5e-27

>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 524

 Score =  166 bits (420), Expect = 3e-39
 Identities = 95/172 (55%), Positives = 119/172 (69%), Gaps = 9/172 (5%)
 Frame = +3

Query: 3   LHAFVEYENVEIAEKAVTELNDERNWRSGLRVRLLLKPALKSVQTRGRKSGNEGEGNA-E 179
           LHAFVEYE+VEIAEKAV ELNDE+NWRSGLRVRL+LK A K  Q RG+K G++G+G++ E
Sbjct: 353 LHAFVEYESVEIAEKAVAELNDEQNWRSGLRVRLMLKRASKPTQARGKK-GHDGQGHSEE 411

Query: 180 DNLSTSDQ--LNKHMEDST---DMTSHEHTVDFSIPDKDXXXXXXXXXXXXXXXXXLQ-- 338
           + +STS+Q    K +ED +   D  SHEH+ +  + +KD                  Q  
Sbjct: 412 EEVSTSEQPPNEKQIEDPSQQYDGHSHEHSGEDHVNEKDGAQRKGRNRGRGKGRGRGQYH 471

Query: 339 -NSRGSHVGTPPASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 491
            N+RG+HVGTPP++N + NEQ S AKQ PGPRMPDGTKGF MGRGKPV  +I
Sbjct: 472 HNNRGNHVGTPPSNNLIINEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAVNI 523


>emb|CBI24756.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  151 bits (382), Expect = 9e-35
 Identities = 88/169 (52%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
 Frame = +3

Query: 3   LHAFVEYENVEIAEKAVTELNDERNWRSGLRVRLLLKPALKSVQTRGRKSGNEGEGNA-E 179
           LHAFVEYE++E+AEKAV ELNDE NWRSGLRVRL+ +   KS Q R RK G+EGE    E
Sbjct: 158 LHAFVEYESIELAEKAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRK-GHEGEAICEE 216

Query: 180 DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDXXXXXXXXXXXXXXXXXLQ----NS 344
           D+  TS+QL N    +  D+ SHEH  +  I DK+                  Q     +
Sbjct: 217 DDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQYHHHGN 276

Query: 345 RGSHVGTPPASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 491
           RG+HVGTPP S+ +N+EQ + AK  PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 277 RGNHVGTPPNSS-INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 324


>ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis
           vinifera]
          Length = 454

 Score =  151 bits (382), Expect = 9e-35
 Identities = 88/169 (52%), Positives = 109/169 (64%), Gaps = 6/169 (3%)
 Frame = +3

Query: 3   LHAFVEYENVEIAEKAVTELNDERNWRSGLRVRLLLKPALKSVQTRGRKSGNEGEGNA-E 179
           LHAFVEYE++E+AEKAV ELNDE NWRSGLRVRL+ +   KS Q R RK G+EGE    E
Sbjct: 287 LHAFVEYESIELAEKAVVELNDEGNWRSGLRVRLMHRRVAKSAQARSRK-GHEGEAICEE 345

Query: 180 DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDXXXXXXXXXXXXXXXXXLQ----NS 344
           D+  TS+QL N    +  D+ SHEH  +  I DK+                  Q     +
Sbjct: 346 DDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRKGRSRGRGKGRGRGQYHHHGN 405

Query: 345 RGSHVGTPPASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 491
           RG+HVGTPP S+ +N+EQ + AK  PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 406 RGNHVGTPPNSS-INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 453


>ref|XP_003554803.1| PREDICTED: uncharacterized protein LOC100813426 isoform 1 [Glycine
           max]
          Length = 467

 Score =  126 bits (316), Expect = 4e-27
 Identities = 73/167 (43%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
 Frame = +3

Query: 3   LHAFVEYENVEIAEKAVTELNDERNWRSGLRVRLLLKPALKSVQTRGRKSGNEGEGNAED 182
           LHAFVEYE+VE+AE+AV ELN+E NWRSGLRVRL+L+   K  Q RG+K  +   G  ED
Sbjct: 301 LHAFVEYESVELAERAVAELNEEGNWRSGLRVRLMLRRMSKPAQGRGKKGLDVEVGCEED 360

Query: 183 N--LSTSDQLNKHMEDST--DMTSHEHTVDFSIPDKDXXXXXXXXXXXXXXXXXLQNSRG 350
           +  +       K +ED++  D   HE+  +    DK+                 +   + 
Sbjct: 361 SPYVPEPQASEKQLEDASFPDTQLHEYVGEEHGHDKESGQRKGRSRGRGKGRGRVHCHQN 420

Query: 351 SHVGTPPASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 491
           + VGTP ++N +  +Q+  AKQ PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 421 NRVGTPSSNNTIFTDQV-VAKQPPGPRMPDGTRGFSMGRGKPVAVNI 466


>ref|XP_004139806.1| PREDICTED: uncharacterized protein LOC101207485 [Cucumis sativus]
          Length = 492

 Score =  125 bits (315), Expect = 5e-27
 Identities = 78/179 (43%), Positives = 102/179 (56%), Gaps = 20/179 (11%)
 Frame = +3

Query: 3   LHAFVEYENVEIAEKAVTELNDERNWRSGLRVRLLLKPALKSVQTRGRKSGNEGEGNAED 182
           LHAFVEYE+VE+AEKAV ELNDE NWR+ LR+RL+L  + KS   RG+K G+ GE N +D
Sbjct: 317 LHAFVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKK-GHNGEMNYKD 375

Query: 183 NLSTSDQ--LNKHMEDSTDMTSHEHTVDFSIPD-----------------KDXXXXXXXX 305
            + TS+Q  + KH++D +D       VD   P+                 ++        
Sbjct: 376 -VDTSEQPAIEKHVDDLSDQ------VDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRG 428

Query: 306 XXXXXXXXXLQNSRGSHVGTPPASNPVNNEQLSAAKQLP-GPRMPDGTKGFTMGRGKPV 479
                      +S G+H+GTPP S+    EQ    KQ P GPRMPDGT+GF+MGRGKPV
Sbjct: 429 RSQYHHNHNNNHSHGNHLGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFSMGRGKPV 487


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