BLASTX nr result

ID: Coptis21_contig00018508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018508
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97375.1| unnamed protein product [Arabidopsis thaliana]        302   1e-79
gb|AFJ66230.1| hypothetical protein 34G24.18 [Capsella rubella]       302   1e-79
ref|NP_568752.1| S-adenosyl-L-methionine-dependent methyltransfe...   302   1e-79
ref|NP_001062384.1| Os08g0540500 [Oryza sativa Japonica Group] g...   301   2e-79
ref|XP_002864098.1| hypothetical protein ARALYDRAFT_495181 [Arab...   298   2e-78

>dbj|BAA97375.1| unnamed protein product [Arabidopsis thaliana]
          Length = 379

 Score =  302 bits (773), Expect = 1e-79
 Identities = 148/256 (57%), Positives = 178/256 (69%), Gaps = 3/256 (1%)
 Frame = +1

Query: 94  FGNYRNYYGYRLAGDMKQDPRFKVFKKEWFEGKDCFDIGCNQGLITIEIATSFSCRSIVG 273
           FGNYRNYYGYR++ D  +DPR KV KKEWFEGKDC DIGCN G++TI IA  F CRSI+G
Sbjct: 125 FGNYRNYYGYRISNDTDEDPRLKVLKKEWFEGKDCLDIGCNSGIMTIHIAKKFGCRSILG 184

Query: 274 VDIDYSLIESAYWNLRRLXXXXXXXXXXXXXXXXDLLDRTEDLVELSVPISLNDETEVPQ 453
           VDID S IE A+W+LR+                 +  D      E SV +S N E +   
Sbjct: 185 VDIDTSRIEDAHWHLRKFVRMQNSTKPSEKKSSSEGADGVHGSKEPSVSLS-NGEAKADS 243

Query: 454 KSPFDR---VSFRKENFVERLSGDLEKYDTILCLSVTKWVHLNWGDDGLLTLFANVWRLL 624
               D    VSF+KENFV+  + D  +YDTILCLSVTKWVHLNWGDDGL+TLF+ +WRLL
Sbjct: 244 AETKDLSQIVSFQKENFVQTRNLDDNRYDTILCLSVTKWVHLNWGDDGLITLFSKIWRLL 303

Query: 625 RPGGIFILEPQPWKSYQKNYQVSETARLNYNSITFRPFFFQEILLDKIGFRTVENITDSI 804
           +PGGIF++EPQPWKSY+ N +VSET  +NY +I  RP  FQEILLDKIGFRTVE++T S+
Sbjct: 304 QPGGIFVMEPQPWKSYENNRRVSETTAMNYRTIVLRPDRFQEILLDKIGFRTVEDLTSSL 363

Query: 805 PGSVTGFDRPIFVFHK 852
            G+  GFDR I  F K
Sbjct: 364 SGASKGFDRQILAFQK 379


>gb|AFJ66230.1| hypothetical protein 34G24.18 [Capsella rubella]
          Length = 339

 Score =  302 bits (773), Expect = 1e-79
 Identities = 148/256 (57%), Positives = 177/256 (69%), Gaps = 3/256 (1%)
 Frame = +1

Query: 94  FGNYRNYYGYRLAGDMKQDPRFKVFKKEWFEGKDCFDIGCNQGLITIEIATSFSCRSIVG 273
           FGNYRNYYGYR++ D  +DPR KV KKEWF+GKDC DIGCN G++TI IA  F CRSI+G
Sbjct: 85  FGNYRNYYGYRISNDTDEDPRLKVLKKEWFQGKDCLDIGCNSGIMTIHIAKKFGCRSILG 144

Query: 274 VDIDYSLIESAYWNLRRLXXXXXXXXXXXXXXXXDLLDRTEDLVELSVPISLNDETEVPQ 453
           VDID S IE A+W+LR+                 +  D     VE S  +S N ET+   
Sbjct: 145 VDIDSSRIEDAHWHLRKFVRMQNSAKSSEKNSSSEGKDGAHGSVEQSTSLS-NGETKADN 203

Query: 454 KSPFDR---VSFRKENFVERLSGDLEKYDTILCLSVTKWVHLNWGDDGLLTLFANVWRLL 624
               D    VSF+KENFV   + D  +YDTILCLSVTKWVHLNWGDDGL+TLF+ +WRLL
Sbjct: 204 PETKDLSQIVSFQKENFVLTRNLDENRYDTILCLSVTKWVHLNWGDDGLITLFSKIWRLL 263

Query: 625 RPGGIFILEPQPWKSYQKNYQVSETARLNYNSITFRPFFFQEILLDKIGFRTVENITDSI 804
           +PGGIF++EPQPWKSY+ N +VSET  +NY  I  RP  FQEILLDKIGFRTVE++T S+
Sbjct: 264 QPGGIFVMEPQPWKSYENNRRVSETTAMNYRKIVLRPDSFQEILLDKIGFRTVEDLTSSL 323

Query: 805 PGSVTGFDRPIFVFHK 852
            G+  GFDR I  F K
Sbjct: 324 SGASKGFDRQILAFQK 339


>ref|NP_568752.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
           [Arabidopsis thaliana]
           gi|75324339|sp|Q6NPC9.1|BIN3D_ARATH RecName:
           Full=Probable RNA methyltransferase At5g51130
           gi|38566690|gb|AAR24235.1| At5g51130 [Arabidopsis
           thaliana] gi|38604062|gb|AAR24774.1| At5g51130
           [Arabidopsis thaliana] gi|332008658|gb|AED96041.1|
           S-adenosyl-L-methionine-dependent methyltransferase-like
           protein [Arabidopsis thaliana]
          Length = 318

 Score =  302 bits (773), Expect = 1e-79
 Identities = 148/256 (57%), Positives = 178/256 (69%), Gaps = 3/256 (1%)
 Frame = +1

Query: 94  FGNYRNYYGYRLAGDMKQDPRFKVFKKEWFEGKDCFDIGCNQGLITIEIATSFSCRSIVG 273
           FGNYRNYYGYR++ D  +DPR KV KKEWFEGKDC DIGCN G++TI IA  F CRSI+G
Sbjct: 64  FGNYRNYYGYRISNDTDEDPRLKVLKKEWFEGKDCLDIGCNSGIMTIHIAKKFGCRSILG 123

Query: 274 VDIDYSLIESAYWNLRRLXXXXXXXXXXXXXXXXDLLDRTEDLVELSVPISLNDETEVPQ 453
           VDID S IE A+W+LR+                 +  D      E SV +S N E +   
Sbjct: 124 VDIDTSRIEDAHWHLRKFVRMQNSTKPSEKKSSSEGADGVHGSKEPSVSLS-NGEAKADS 182

Query: 454 KSPFDR---VSFRKENFVERLSGDLEKYDTILCLSVTKWVHLNWGDDGLLTLFANVWRLL 624
               D    VSF+KENFV+  + D  +YDTILCLSVTKWVHLNWGDDGL+TLF+ +WRLL
Sbjct: 183 AETKDLSQIVSFQKENFVQTRNLDDNRYDTILCLSVTKWVHLNWGDDGLITLFSKIWRLL 242

Query: 625 RPGGIFILEPQPWKSYQKNYQVSETARLNYNSITFRPFFFQEILLDKIGFRTVENITDSI 804
           +PGGIF++EPQPWKSY+ N +VSET  +NY +I  RP  FQEILLDKIGFRTVE++T S+
Sbjct: 243 QPGGIFVMEPQPWKSYENNRRVSETTAMNYRTIVLRPDRFQEILLDKIGFRTVEDLTSSL 302

Query: 805 PGSVTGFDRPIFVFHK 852
            G+  GFDR I  F K
Sbjct: 303 SGASKGFDRQILAFQK 318


>ref|NP_001062384.1| Os08g0540500 [Oryza sativa Japonica Group]
           gi|38636673|dbj|BAD03094.1| bicoid-interacting protein
           3-like [Oryza sativa Japonica Group]
           gi|113624353|dbj|BAF24298.1| Os08g0540500 [Oryza sativa
           Japonica Group] gi|125604181|gb|EAZ43506.1| hypothetical
           protein OsJ_28122 [Oryza sativa Japonica Group]
           gi|215741251|dbj|BAG97746.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 315

 Score =  301 bits (771), Expect = 2e-79
 Identities = 142/256 (55%), Positives = 181/256 (70%)
 Frame = +1

Query: 85  VAVFGNYRNYYGYRLAGDMKQDPRFKVFKKEWFEGKDCFDIGCNQGLITIEIATSFSCRS 264
           V V+GNYRNYYGYR+  ++ +DPR K+FK+EWFE KDC DIGCNQGL+TI +A  F C+S
Sbjct: 52  VFVYGNYRNYYGYRIDRNVDEDPRLKIFKREWFESKDCLDIGCNQGLVTIGLAAKFKCQS 111

Query: 265 IVGVDIDYSLIESAYWNLRRLXXXXXXXXXXXXXXXXDLLDRTEDLVELSVPISLNDETE 444
           I+GVDID  LIE+A WNLRR+                          +++  IS  D + 
Sbjct: 112 ILGVDIDSGLIETANWNLRRMSRLDKVVVENTKAHKSSDSPSESCPEKVAPEISNGDISN 171

Query: 445 VPQKSPFDRVSFRKENFVERLSGDLEKYDTILCLSVTKWVHLNWGDDGLLTLFANVWRLL 624
                 F  VSFR+ENFV+ +    E+YDTI+CLSVTKW+HLNWGDDG++TLF  +WRLL
Sbjct: 172 GSHHDIFKVVSFRRENFVDSMCTSSEQYDTIVCLSVTKWIHLNWGDDGIITLFVKIWRLL 231

Query: 625 RPGGIFILEPQPWKSYQKNYQVSETARLNYNSITFRPFFFQEILLDKIGFRTVENITDSI 804
           RPGG+FI+EPQPW SY++N  VSE A+ N+N+I   P  F+EILLDKIGFR+VE +TD +
Sbjct: 232 RPGGVFIMEPQPWTSYRRNRLVSEVAKENFNTILIHPDKFREILLDKIGFRSVEVVTDKL 291

Query: 805 PGSVTGFDRPIFVFHK 852
            G+VTGFDRPI V+HK
Sbjct: 292 EGAVTGFDRPIEVYHK 307


>ref|XP_002864098.1| hypothetical protein ARALYDRAFT_495181 [Arabidopsis lyrata subsp.
           lyrata] gi|297309933|gb|EFH40357.1| hypothetical protein
           ARALYDRAFT_495181 [Arabidopsis lyrata subsp. lyrata]
          Length = 313

 Score =  298 bits (763), Expect = 2e-78
 Identities = 147/256 (57%), Positives = 177/256 (69%), Gaps = 3/256 (1%)
 Frame = +1

Query: 94  FGNYRNYYGYRLAGDMKQDPRFKVFKKEWFEGKDCFDIGCNQGLITIEIATSFSCRSIVG 273
           FGNYRNYYGYR++ D  +DPR KV KKEWFEGKDC DIGCN G++TI IA  F CRSI+G
Sbjct: 59  FGNYRNYYGYRISHDTDEDPRLKVLKKEWFEGKDCLDIGCNSGIMTIHIAKKFGCRSILG 118

Query: 274 VDIDYSLIESAYWNLRRLXXXXXXXXXXXXXXXXDLLDRTEDLVELSVPISLNDETEVPQ 453
           VDID S IE A+W+LR+                 +  +      E SV +S N E +   
Sbjct: 119 VDIDSSRIEDAHWHLRKFVRMQNSAKPSEQKSSSEGAEGVHRSKEQSVSLS-NGEAKTDS 177

Query: 454 KSPFDR---VSFRKENFVERLSGDLEKYDTILCLSVTKWVHLNWGDDGLLTLFANVWRLL 624
               D    VSF+KENFV   + D  +YDTILCLSVTKWVHLNWGDDGL+TLF+ +WRLL
Sbjct: 178 AETKDLSQIVSFQKENFVLTRNLDENRYDTILCLSVTKWVHLNWGDDGLITLFSKIWRLL 237

Query: 625 RPGGIFILEPQPWKSYQKNYQVSETARLNYNSITFRPFFFQEILLDKIGFRTVENITDSI 804
           +PGGIF++EPQPWKSY+ N +VSET  +NY +I  RP  FQEILLDKIGFRTVE++T S+
Sbjct: 238 QPGGIFVMEPQPWKSYENNRRVSETTAMNYRTIVLRPDRFQEILLDKIGFRTVEDLTSSL 297

Query: 805 PGSVTGFDRPIFVFHK 852
            G+  GFDR I  F K
Sbjct: 298 SGASKGFDRQILAFQK 313


Top