BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018507
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 1...   494   e-137
ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 1...   491   e-136
gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding ...   491   e-136
ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 1...   491   e-136
gb|AFK48392.1| unknown [Lotus japonicus]                              489   e-136

>ref|XP_002284493.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 266

 Score =  494 bits (1271), Expect = e-137
 Identities = 235/255 (92%), Positives = 244/255 (95%)
 Frame = -3

Query: 949 VLRPSQFLGQVRSTNVNSLRDVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 770
           VLRP+ FLGQ R  N N LRDVV MGTGK++M N+LWYGPDRVKYLGPFSAQTPSYL GE
Sbjct: 12  VLRPTPFLGQTRGANSNPLRDVVPMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLTGE 71

Query: 769 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 590
           FPGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGALGCITPEVLEKW++VDFKEP+WF
Sbjct: 72  FPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPIWF 131

Query: 589 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 410
           KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGDGNNLYPG
Sbjct: 132 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGDGNNLYPG 191

Query: 409 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 230
           G YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PV
Sbjct: 192 GQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 251

Query: 229 ANNAWVYATKFVPGS 185
           ANNAWVYATKFVPGS
Sbjct: 252 ANNAWVYATKFVPGS 266


>ref|XP_004149296.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Cucumis sativus] gi|449532805|ref|XP_004173369.1|
           PREDICTED: chlorophyll a-b binding protein 13,
           chloroplastic-like [Cucumis sativus]
          Length = 264

 Score =  491 bits (1263), Expect = e-136
 Identities = 234/255 (91%), Positives = 246/255 (96%)
 Frame = -3

Query: 949 VLRPSQFLGQVRSTNVNSLRDVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 770
           +LR + FLGQ R++  N LRDVVAMGTGK++MSNDLWYGPDRVKYLGPFSAQTPSYLNGE
Sbjct: 10  LLRATPFLGQARASPQNPLRDVVAMGTGKYTMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 69

Query: 769 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 590
           FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW+KVDFKEPVWF
Sbjct: 70  FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWF 129

Query: 589 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 410
           KAG+QIF+EGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL+GVG+GN+LYPG
Sbjct: 130 KAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPG 189

Query: 409 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 230
           G YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD PV
Sbjct: 190 GQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPV 249

Query: 229 ANNAWVYATKFVPGS 185
           ANNAWVYATKF PGS
Sbjct: 250 ANNAWVYATKFAPGS 264


>gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
          Length = 269

 Score =  491 bits (1263), Expect = e-136
 Identities = 233/255 (91%), Positives = 247/255 (96%)
 Frame = -3

Query: 949 VLRPSQFLGQVRSTNVNSLRDVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 770
           VL+P+ FLGQ +++N N LRDVV+MG+GK+SMSN+LWYGPDRVKYLGPFSAQTPSYL GE
Sbjct: 15  VLKPTPFLGQGKASNGNPLRDVVSMGSGKYSMSNELWYGPDRVKYLGPFSAQTPSYLKGE 74

Query: 769 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 590
           FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKW++VDFKEPVWF
Sbjct: 75  FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWLRVDFKEPVWF 134

Query: 589 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 410
           KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL+GVG+GNNLYPG
Sbjct: 135 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPG 194

Query: 409 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 230
           G YFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PV
Sbjct: 195 GQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPV 254

Query: 229 ANNAWVYATKFVPGS 185
           ANNAWVYATKF PGS
Sbjct: 255 ANNAWVYATKFAPGS 269


>ref|XP_003634999.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
           [Vitis vinifera]
          Length = 269

 Score =  491 bits (1263), Expect = e-136
 Identities = 233/254 (91%), Positives = 243/254 (95%)
 Frame = -3

Query: 946 LRPSQFLGQVRSTNVNSLRDVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGEF 767
           LRP+QFLGQ R +N N LR+VV MGTGKF+M N+LWYGPDRVKYLGPFSAQTPSYL GEF
Sbjct: 16  LRPTQFLGQTRGSNANQLREVVPMGTGKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEF 75

Query: 766 PGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWFK 587
           PGDYGWDTAGLSADPEAFA+NRALEVIHGRWAMLGA GCITPEVLEKWVKVDFKEPVWFK
Sbjct: 76  PGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGAFGCITPEVLEKWVKVDFKEPVWFK 135

Query: 586 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPGG 407
           AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEG+RINGL GVG+GN+LYPGG
Sbjct: 136 AGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNDLYPGG 195

Query: 406 TYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPVA 227
            YFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD+PVA
Sbjct: 196 PYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVA 255

Query: 226 NNAWVYATKFVPGS 185
           NNAW YATKFVPGS
Sbjct: 256 NNAWAYATKFVPGS 269


>gb|AFK48392.1| unknown [Lotus japonicus]
          Length = 270

 Score =  489 bits (1260), Expect = e-136
 Identities = 232/255 (90%), Positives = 244/255 (95%)
 Frame = -3

Query: 949 VLRPSQFLGQVRSTNVNSLRDVVAMGTGKFSMSNDLWYGPDRVKYLGPFSAQTPSYLNGE 770
           V++PS FLGQ + +N N+LRDVV+MGTGK++M NDLWYGPDRVKYLGPFSAQTPSYL GE
Sbjct: 16  VIKPSPFLGQTKGSNSNTLRDVVSMGTGKYTMGNDLWYGPDRVKYLGPFSAQTPSYLTGE 75

Query: 769 FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVKVDFKEPVWF 590
           FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWV+VDFKEPVWF
Sbjct: 76  FPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWF 135

Query: 589 KAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLEGVGDGNNLYPG 410
           KAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGL GVG+GNNLYPG
Sbjct: 136 KAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLPGVGEGNNLYPG 195

Query: 409 GTYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDSPV 230
             YFDPLGLADDP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLD PV
Sbjct: 196 DQYFDPLGLADDPATFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDDPV 255

Query: 229 ANNAWVYATKFVPGS 185
           ANNAWVYATKFVPGS
Sbjct: 256 ANNAWVYATKFVPGS 270