BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018506
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40586.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III s...   147   2e-33
ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [S...   145   5e-33
ref|NP_001131695.1| uncharacterized protein LOC100193056 [Zea ma...   140   2e-31
ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group] g...   140   2e-31

>emb|CBI40586.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  147 bits (371), Expect = 2e-33
 Identities = 68/110 (61%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
 Frame = +3

Query: 69  MEFCPTCGNMLQFDAQNLGQKARLFCPTCPYICEIEN--KIKRRQPLVKKTIEPIFNSKD 242
           MEFCPTCGN LQ++  ++G+ AR FCPTCPY+C IE   KIKR+Q LVKK IEPIF SKD
Sbjct: 65  MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIF-SKD 123

Query: 243 EMKTAKKTSVNCPDCNSIEAYFIEFQTRSADEPMSRFYRCCNDECNREWR 392
           +MK    T   CP CN  +A F + QTRSADEPMS FY C N+ C R+WR
Sbjct: 124 DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWR 173


>ref|XP_002267122.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Vitis vinifera]
          Length = 111

 Score =  147 bits (371), Expect = 2e-33
 Identities = 68/110 (61%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
 Frame = +3

Query: 69  MEFCPTCGNMLQFDAQNLGQKARLFCPTCPYICEIEN--KIKRRQPLVKKTIEPIFNSKD 242
           MEFCPTCGN LQ++  ++G+ AR FCPTCPY+C IE   KIKR+Q LVKK IEPIF SKD
Sbjct: 1   MEFCPTCGNFLQYELPHMGRPARFFCPTCPYVCHIETKVKIKRKQRLVKKEIEPIF-SKD 59

Query: 243 EMKTAKKTSVNCPDCNSIEAYFIEFQTRSADEPMSRFYRCCNDECNREWR 392
           +MK    T   CP CN  +A F + QTRSADEPMS FY C N+ C R+WR
Sbjct: 60  DMKNGPTTDATCPHCNFGKAVFQQLQTRSADEPMSTFYWCLNENCGRQWR 109


>ref|XP_002454492.1| hypothetical protein SORBIDRAFT_04g032090 [Sorghum bicolor]
           gi|241934323|gb|EES07468.1| hypothetical protein
           SORBIDRAFT_04g032090 [Sorghum bicolor]
          Length = 166

 Score =  145 bits (367), Expect = 5e-33
 Identities = 63/109 (57%), Positives = 77/109 (70%)
 Frame = +3

Query: 66  AMEFCPTCGNMLQFDAQNLGQKARLFCPTCPYICEIENKIKRRQPLVKKTIEPIFNSKDE 245
           AMEFCP CG +LQ D      + RLFC  CPY+C I+NKI ++  LVKK +EPIF++ DE
Sbjct: 56  AMEFCPVCGMLLQIDPGTASHRLRLFCSVCPYVCPIQNKIVKKARLVKKEVEPIFSTADE 115

Query: 246 MKTAKKTSVNCPDCNSIEAYFIEFQTRSADEPMSRFYRCCNDECNREWR 392
           MK+A KT+V C  CN  EAYF + Q RSADEPM+  YRCC +EC  EWR
Sbjct: 116 MKSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWR 164


>ref|NP_001131695.1| uncharacterized protein LOC100193056 [Zea mays]
           gi|194692264|gb|ACF80216.1| unknown [Zea mays]
           gi|195653763|gb|ACG46349.1| hypothetical protein [Zea
           mays] gi|413923417|gb|AFW63349.1| hypothetical protein
           ZEAMMB73_646152 [Zea mays]
          Length = 110

 Score =  140 bits (354), Expect = 2e-31
 Identities = 62/108 (57%), Positives = 75/108 (69%)
 Frame = +3

Query: 69  MEFCPTCGNMLQFDAQNLGQKARLFCPTCPYICEIENKIKRRQPLVKKTIEPIFNSKDEM 248
           MEFCP CG +LQ D      + RLFCP CPY+C I NKI ++  LVKK +EPI ++ DEM
Sbjct: 1   MEFCPVCGILLQIDPGTGSHRLRLFCPVCPYVCPILNKIVKKARLVKKEVEPISSTADEM 60

Query: 249 KTAKKTSVNCPDCNSIEAYFIEFQTRSADEPMSRFYRCCNDECNREWR 392
           K+A KT+V C  CN  EAYF + Q RSADEPM+  YRCC +EC  EWR
Sbjct: 61  KSAPKTAVTCQRCNHGEAYFKQMQIRSADEPMTTIYRCCKEECQHEWR 108


>ref|NP_001047708.1| Os02g0672700 [Oryza sativa Japonica Group]
           gi|50251233|dbj|BAD27819.1| putative DNA-directed RNA
           polymerase III [Oryza sativa Japonica Group]
           gi|50251924|dbj|BAD27861.1| putative DNA-directed RNA
           polymerase II [Oryza sativa Japonica Group]
           gi|113537239|dbj|BAF09622.1| Os02g0672700 [Oryza sativa
           Japonica Group] gi|215708708|dbj|BAG93977.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215765354|dbj|BAG87051.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 110

 Score =  140 bits (353), Expect = 2e-31
 Identities = 58/108 (53%), Positives = 75/108 (69%)
 Frame = +3

Query: 69  MEFCPTCGNMLQFDAQNLGQKARLFCPTCPYICEIENKIKRRQPLVKKTIEPIFNSKDEM 248
           MEFCP CG +LQ      G + R +CPTCPY+C ++NKI ++  LVKK +EPIF+  D M
Sbjct: 1   MEFCPGCGMLLQIQPATGGNRLRFYCPTCPYVCPVKNKIVKKARLVKKEVEPIFSDSDAM 60

Query: 249 KTAKKTSVNCPDCNSIEAYFIEFQTRSADEPMSRFYRCCNDECNREWR 392
           K A KT+  CP C + EAY+ + Q RSADEPMS FY+CC +EC  +WR
Sbjct: 61  KNAPKTTTTCPRCQNGEAYYRQMQIRSADEPMSTFYKCCREECQFDWR 108