BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018496
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...    62   6e-08
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...    60   1e-07
ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    60   2e-07

>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 47/116 (40%), Positives = 59/116 (50%)
 Frame = -3

Query: 351 PLSVPLCLFNCASLTVLKLQFERVYVPLALPHFISLPVLLTLHLKSVNFLDEDLTSKLIS 172
           P+ +P C FNC SL  LKL   R+   +ALP  + LP L TLHL      D     K+ S
Sbjct: 138 PIVLPRCFFNCESLRSLKL---RIDGGIALPKSLGLPSLKTLHLGGAQNFD----GKIFS 190

Query: 171 SCPVLESLVIVDCGFGRMEKLIISGLGLKHLMIENRCYEILSFFKRFYCKIIIFAP 4
           SCP LE+L I D     +E   I  L LK L I N  Y  +       CK+++FAP
Sbjct: 191 SCPNLENLTIEDICLNTIENFNIHALNLKSLEILNWRYSRI----MRGCKVMLFAP 242


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/116 (38%), Positives = 58/116 (50%)
 Frame = -3

Query: 351 PLSVPLCLFNCASLTVLKLQFERVYVPLALPHFISLPVLLTLHLKSVNFLDEDLTSKLIS 172
           P+ +P C F+C SL  LKL   +V   LALP  + L  L TLHL      D     K+ S
Sbjct: 138 PIVLPRCFFDCESLRSLKL---KVDGGLALPKSLGLQSLKTLHLGGAQNFD----GKIFS 190

Query: 171 SCPVLESLVIVDCGFGRMEKLIISGLGLKHLMIENRCYEILSFFKRFYCKIIIFAP 4
           SCP LE+L I D     +E   I  L LK L I N  Y  +    +  CK+++ AP
Sbjct: 191 SCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRI----KQGCKVMLVAP 242


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
           gi|222873903|gb|EEF11034.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 45/116 (38%), Positives = 58/116 (50%)
 Frame = -3

Query: 351 PLSVPLCLFNCASLTVLKLQFERVYVPLALPHFISLPVLLTLHLKSVNFLDEDLTSKLIS 172
           P+ +P C F+C SL  LKL   +V   LALP  + L  L TLHL      D     K+ S
Sbjct: 157 PIVLPRCFFDCESLRSLKL---KVDGGLALPKSLGLQSLKTLHLGGAQNFD----GKIFS 209

Query: 171 SCPVLESLVIVDCGFGRMEKLIISGLGLKHLMIENRCYEILSFFKRFYCKIIIFAP 4
           SCP LE+L I D     +E   I  L LK L I N  Y  +    +  CK+++ AP
Sbjct: 210 SCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRI----KQGCKVMLVAP 261


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
           gi|222873902|gb|EEF11033.1| f-box family protein
           [Populus trichocarpa]
          Length = 453

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 44/116 (37%), Positives = 58/116 (50%)
 Frame = -3

Query: 351 PLSVPLCLFNCASLTVLKLQFERVYVPLALPHFISLPVLLTLHLKSVNFLDEDLTSKLIS 172
           P+ +P C F+C SL  LKL   +V   +ALP  + L  L TLHL      D     K+ S
Sbjct: 157 PIVLPRCFFDCESLRSLKL---KVDGGIALPKSLGLQSLKTLHLGGARNFD----GKIFS 209

Query: 171 SCPVLESLVIVDCGFGRMEKLIISGLGLKHLMIENRCYEILSFFKRFYCKIIIFAP 4
           +CP LE+L I D     +E   I  L LK L I N  Y  +       CK+++FAP
Sbjct: 210 TCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRI----MRGCKVMLFAP 261


>ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|122214671|sp|Q3EAE5.1|FDL24_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At4g00315
           gi|332656456|gb|AEE81856.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 441

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/97 (35%), Positives = 53/97 (54%)
 Frame = -3

Query: 351 PLSVPLCLFNCASLTVLKLQFERVYVPLALPHFISLPVLLTLHLKSVNFLDEDLTSKLIS 172
           P  +P  L+ C S+ +LKL+ E   + + +P  + LP L TL L  V + DED   +L+S
Sbjct: 122 PTKLPKSLYKCKSIVILKLKDE---ILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLS 178

Query: 171 SCPVLESLVIVDCGFGRMEKLIISGLGLKHLMIENRC 61
           +CPVLE LV+       + KL +    L+ L ++  C
Sbjct: 179 NCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSC 215