BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018480
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medi...    94   1e-17
ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig...    92   3e-17
ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig...    91   1e-16
ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
emb|CBI32027.3| unnamed protein product [Vitis vinifera]               86   2e-15

>ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
           gi|355514908|gb|AES96531.1| RCC1 and BTB
           domain-containing protein [Medicago truncatula]
          Length = 615

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 45/69 (65%), Positives = 51/69 (73%)
 Frame = -1

Query: 208 IARIIANGDQSAALTVDGHLYTWGKGFHGMSDACLPLFPSSALKFTKVALGWNHALLLTD 29
           I  I ANGD SAAL+VDGHLYTWG+GF G  D+ LP   +S  KFTKV LGWNHAL +T 
Sbjct: 439 IVGISANGDHSAALSVDGHLYTWGRGFKGYEDSHLPQCLNSTSKFTKVTLGWNHALAMTG 498

Query: 28  CGTVFMLGG 2
            G V+MLGG
Sbjct: 499 EGKVYMLGG 507


>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = -1

Query: 208 IARIIANGDQSAALTVDGHLYTWGKGFHGMSDACLPLFPSSALKFTKVALGWNHALLLTD 29
           IA I ANGD SAA++VDGH+YTWG+GF G  DA +P   +S+L FTKVALGWNHAL ++ 
Sbjct: 212 IAGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSG 271

Query: 28  CGTVFMLGG 2
            G V MLGG
Sbjct: 272 EGEVCMLGG 280


>ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -1

Query: 193 ANGDQSAALTVDGHLYTWGKGFHGMSDACLPLFPSSALKFTKVALGWNHALLLTDCGTVF 14
           ANGD SAA++VDGH+YTWG+GF G  DA +P   +S+L FTKVALGWNHAL ++  G V+
Sbjct: 217 ANGDHSAAVSVDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVY 276

Query: 13  MLGG 2
           MLGG
Sbjct: 277 MLGG 280


>ref|XP_002321756.1| predicted protein [Populus trichocarpa] gi|222868752|gb|EEF05883.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/69 (62%), Positives = 48/69 (69%)
 Frame = -1

Query: 208 IARIIANGDQSAALTVDGHLYTWGKGFHGMSDACLPLFPSSALKFTKVALGWNHALLLTD 29
           I  I ANGD SAA++ DGHLYTWG+GF G SDA  P    S+L+ TK ALGWNH LLLT 
Sbjct: 210 IVSISANGDHSAAISADGHLYTWGRGFAGASDANFPQLSLSSLRCTKAALGWNHGLLLTG 269

Query: 28  CGTVFMLGG 2
              V MLGG
Sbjct: 270 DEEVLMLGG 278


>emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/69 (62%), Positives = 49/69 (71%)
 Frame = -1

Query: 208 IARIIANGDQSAALTVDGHLYTWGKGFHGMSDACLPLFPSSALKFTKVALGWNHALLLTD 29
           I  I ANGD SAAL+ +GHLYTWG+GF   SD   P    S+L FT+VALGWNH L+LT 
Sbjct: 221 IISIDANGDHSAALSANGHLYTWGRGFGSTSDVHCPRCLPSSLCFTQVALGWNHMLVLTG 280

Query: 28  CGTVFMLGG 2
            G VFMLGG
Sbjct: 281 GGEVFMLGG 289