BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018478
         (1778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   523   e-146
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   489   e-135
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   485   e-134
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              483   e-134

>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  523 bits (1347), Expect = e-146
 Identities = 269/498 (54%), Positives = 363/498 (72%), Gaps = 10/498 (2%)
 Frame = +2

Query: 194  SGAARGRRMCTLSIQETKP---------RNQTNLPLYRRLSALGIAGESVSKTMNEYVRE 346
            +GA   RR+CT +   T+P         R+     LY RLSALG  G SV+ T+NE+++E
Sbjct: 12   AGAGLARRLCTAAAA-TEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEHIKE 70

Query: 347  GKSVRKNEIESCVKQLRKFKRYHHALELMEWMETRGNNLSYSDYAVRLDLLSKTKGLNQA 526
            GK + K+E+ SC+KQLRK++++ HALE+M+WME R    SY+DYAVRLDLLSKTKGL  A
Sbjct: 71   GKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDLLSKTKGLATA 130

Query: 527  VEYFDNLPDPAKNHLTYGALLNCYCKNEKTEKAFDLFEKMSEKNITST-LAFNNLMTLHM 703
             EYF+NL   AKN LTYG LLNCYCK +  EKA  LFEKM E N  ST L FNNLM+LHM
Sbjct: 131  EEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHM 190

Query: 704  KLGEPEKVPLLLQKMKEKSISPDTFTYNIVMASHAATKDIEGVERVLKEMETKDSERCDW 883
            +LG+PE VP L+ +MK++SISPDTFTYNI+M S+A   DIEG ERVL+E++ ++ ++  W
Sbjct: 191  RLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSW 250

Query: 884  STYSNLASIYIKAGIIDKANLALIELEKKMMPSYRTAYHFLISFYASTSNLSEVHRVWSS 1063
            +TYSNLA++Y+ A + +KA LAL +LE++M    R AYHFLIS YA  +NLSEV+RVW+S
Sbjct: 251  TTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNS 310

Query: 1064 LKSALPTTNNLSYLVMLQSLSKLDDLDGLTKCFKDWETSCSSYDMRLANTVLSAYLRRDM 1243
            LKSA P TNN+SY +MLQ+L+ L+D+DGL  CF++W++SC S+D+RLAN  + A+L  DM
Sbjct: 311  LKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDM 370

Query: 1244 VNEARLICEDAIKRGPGLNYRTHELFMDFFIRNLQLDSALSCMEACMSIVXXXXXNEWKP 1423
            + +A  I  +A+KR  G  Y   ++FM   ++  ++D+AL  MEA  S V     NEW+P
Sbjct: 371  IKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEV---KNNEWQP 427

Query: 1424 TPERVMAFLKHCVEQKNVTGAEEFCKMLKNVDCLDSNAYCLLLSTYIAANKKEPGMRKRL 1603
             PERV+AFLK+  E+K+V GAE+FCK+LKN+  LDSNAY LLL T +AA + EP MRKR+
Sbjct: 428  APERVLAFLKYFEEEKDVEGAEKFCKILKNISGLDSNAYQLLLQTXVAAGRTEPEMRKRM 487

Query: 1604 EMDSIKVTPELEELLEKV 1657
            + D I+V  + ++LL++V
Sbjct: 488  KEDDIEV--DSKDLLQRV 503


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  489 bits (1258), Expect = e-135
 Identities = 252/476 (52%), Positives = 329/476 (69%), Gaps = 14/476 (2%)
 Frame = +2

Query: 272  LYRRLSALGIAGESVSKTMNEYVREGKSVRKNEIESCVKQLRKFKRYHHALELMEWMETR 451
            +YRRLS LG +G SVSKT+NE + EG    K  + +C+K+LRK+ R+ HA+E+MEWM+ R
Sbjct: 1    MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60

Query: 452  GNNLSYSDYAVRLDLLSKTKGLNQAVEYFDNLPDPAKNHLTYGALLNCYCKNEKTEKAFD 631
              N S+ D+AV LDL +KTKG+  A  YFDNLP   +NH+TY  LLNCYCK   +EKA  
Sbjct: 61   KMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEKALT 120

Query: 632  LFEKMSEKNITST-LAFNNLMTLHMKLGEPEKVPLLLQKMKEKSISPDTFTYNIVMASHA 808
            LFEKM +  + ST + FNNLMTLHM+LG+PEKV  ++Q+MK++ +SP TFTYNI M S+ 
Sbjct: 121  LFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQSYG 180

Query: 809  ATKDIEGVERVLKEMETKDSERCDWSTYSNLASIYIKAGIIDKANLALIELE-------- 964
               D EGV+RVL EM+T   E   W+TYSNLA+IY+KAG+ DKA  AL +LE        
Sbjct: 181  CLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIECGRD 240

Query: 965  -----KKMMPSYRTAYHFLISFYASTSNLSEVHRVWSSLKSALPTTNNLSYLVMLQSLSK 1129
                 K+   + R AYHFLIS YA TSNLSEVHRVW+SLKS+  TT N+SYL +LQ+L+K
Sbjct: 241  CDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQALAK 300

Query: 1130 LDDLDGLTKCFKDWETSCSSYDMRLANTVLSAYLRRDMVNEARLICEDAIKRGPGLNYRT 1309
            L D++G+ KCFK+WE+SC SYDM LAN  + A L  DM  EA  I ++A+KR  GL ++ 
Sbjct: 301  LKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKA 360

Query: 1310 HELFMDFFIRNLQLDSALSCMEACMSIVXXXXXNEWKPTPERVMAFLKHCVEQKNVTGAE 1489
             E+FM FF++N Q D AL  M+A  S        EW+P  + V AFL +  + K+V GAE
Sbjct: 361  REMFMVFFLKNHQPDLALKHMKAAFSEAKEI---EWQPDQKTVSAFLNYFEDGKDVDGAE 417

Query: 1490 EFCKMLKNVDCLDSNAYCLLLSTYIAANKKEPGMRKRLEMDSIKVTPELEELLEKV 1657
              CK+ K ++ L+SNAY LLL TY AA +  P MR+RLE D+I++ PELE LLE+V
Sbjct: 418  RLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERV 473


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
            gi|449518825|ref|XP_004166436.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  488 bits (1257), Expect = e-135
 Identities = 242/467 (51%), Positives = 335/467 (71%), Gaps = 2/467 (0%)
 Frame = +2

Query: 272  LYRRLSALGIAGESVSKTMNEYVREGKSVRKNEIESCVKQLRKFKRYHHALELMEWMETR 451
            LY RLSALG  G SV+KT+N+++ EG  V+K E+E C+K+LRK++RYHH L++MEWMETR
Sbjct: 11   LYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETR 70

Query: 452  GNNLSYSDYAVRLDLLSKTKGLNQAVEYFDNLPDPAKNHLTYGALLNCYCKNEKTEKAFD 631
              N S++DYA+RLDL+SK  G+  A +YF +LP  AKN  TYGALLNCYCK    EKA  
Sbjct: 71   KINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALT 130

Query: 632  LFEKMSEKNITSTLAFNNLMTLHMKLGEPEKVPLLLQKMKEKSISPDTFTYNIVMASHAA 811
            LF+KM E  I+++L+FNNLMT++M++  PEKVP L+ +MK++     TFTYN+ M S A+
Sbjct: 131  LFKKMDELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCAS 190

Query: 812  TKDIEGVERVLKEMETKDSERCDWSTYSNLASIYIKAGIIDKANLALIELEKKMM--PSY 985
              DI  VE +L+EM+ +D  + DW+TYSNLAS Y+KAG  +KA LAL +LE++M    + 
Sbjct: 191  LNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKND 250

Query: 986  RTAYHFLISFYASTSNLSEVHRVWSSLKSALPTTNNLSYLVMLQSLSKLDDLDGLTKCFK 1165
            R  YH LIS YASTSNLSEV+R+W++LKS   T  N+SYLVMLQ+L KL D++GL + +K
Sbjct: 251  RLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYK 310

Query: 1166 DWETSCSSYDMRLANTVLSAYLRRDMVNEARLICEDAIKRGPGLNYRTHELFMDFFIRNL 1345
            +WE++C ++D+R+ N ++ AYL++DM  +A +I EDA KR  G   R  E+FM +F++  
Sbjct: 311  EWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLK 370

Query: 1346 QLDSALSCMEACMSIVXXXXXNEWKPTPERVMAFLKHCVEQKNVTGAEEFCKMLKNVDCL 1525
            Q+DSA S +E+ +S        EW P+     AFL +  E+K+V GAE+F ++LK + CL
Sbjct: 371  QVDSAFSHLESALS---ESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCL 427

Query: 1526 DSNAYCLLLSTYIAANKKEPGMRKRLEMDSIKVTPELEELLEKVCMQ 1666
            D++ Y LLL TY+AA K  P MRKRL+ D I+++ ELEELL  VC Q
Sbjct: 428  DASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVCPQ 474


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  485 bits (1248), Expect = e-134
 Identities = 246/464 (53%), Positives = 333/464 (71%), Gaps = 1/464 (0%)
 Frame = +2

Query: 272  LYRRLSALGIAGESVSKTMNEYVREGKSVRKNEIESCVKQLRKFKRYHHALELMEWMETR 451
            LY+RLS LG +GESVSKT+N++V EG    K ++ +C+++LRK+ R+ +A+E+MEWM+ R
Sbjct: 15   LYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEWMQKR 74

Query: 452  GNNLSYSDYAVRLDLLSKTKGLNQAVEYFDNLPDPAKNHLTYGALLNCYCKNEKTEKAFD 631
              N+S+   AV LDL++K +G+  A  YFD L    +NH T+GALL+CYC+   +EKA  
Sbjct: 75   KMNVSH---AVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALT 131

Query: 632  LFEKMSE-KNITSTLAFNNLMTLHMKLGEPEKVPLLLQKMKEKSISPDTFTYNIVMASHA 808
            LFEKM + K + ++L FNNL++LH++L +PEKV  ++Q+MK+K +SP TFTYN+ M S+ 
Sbjct: 132  LFEKMDKMKFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYG 191

Query: 809  ATKDIEGVERVLKEMETKDSERCDWSTYSNLASIYIKAGIIDKANLALIELEKKMMPSYR 988
               D EGVERVL EM+    +   W+TY+NLA+IY+KAG  DKA  AL ++E+++   YR
Sbjct: 192  CLNDFEGVERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYR 251

Query: 989  TAYHFLISFYASTSNLSEVHRVWSSLKSALPTTNNLSYLVMLQSLSKLDDLDGLTKCFKD 1168
             AYHFLI+ YA TSNL EV+RVW+SLKS   TT N+SYL ML +L+KL D++GL KCFK+
Sbjct: 252  EAYHFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKE 311

Query: 1169 WETSCSSYDMRLANTVLSAYLRRDMVNEARLICEDAIKRGPGLNYRTHELFMDFFIRNLQ 1348
            WE+SC SYDMRLAN  + A L  DM  EA LI +DA+KR  GL +   E+FM FF++N Q
Sbjct: 312  WESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNHQ 371

Query: 1349 LDSALSCMEACMSIVXXXXXNEWKPTPERVMAFLKHCVEQKNVTGAEEFCKMLKNVDCLD 1528
            LD AL  M+A  S V      EW+P P+ V AF  +  ++K+V GAE  CK+LK+++ LD
Sbjct: 372  LDLALKHMKAAFSEVKEI---EWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLD 428

Query: 1529 SNAYCLLLSTYIAANKKEPGMRKRLEMDSIKVTPELEELLEKVC 1660
            SNAY LLL TYIAA K  P MR+RLE D I++ PELE LLE+VC
Sbjct: 429  SNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  483 bits (1242), Expect = e-134
 Identities = 245/451 (54%), Positives = 329/451 (72%), Gaps = 10/451 (2%)
 Frame = +2

Query: 194  SGAARGRRMCTLSIQETKP---------RNQTNLPLYRRLSALGIAGESVSKTMNEYVRE 346
            +GA   RR+CT +   T+P         R+     LY RLSALG  G SV+ T+NE+++E
Sbjct: 51   AGAGLARRLCTAAAA-TEPEEVAVQAASRSVRQPRLYHRLSALGATGGSVADTLNEHIKE 109

Query: 347  GKSVRKNEIESCVKQLRKFKRYHHALELMEWMETRGNNLSYSDYAVRLDLLSKTKGLNQA 526
            GK + K+E+ SC+KQLRK++++ HALE+M+WME R    SY+DYAVRLDLLSKTKGL  A
Sbjct: 110  GKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFFSYADYAVRLDLLSKTKGLATA 169

Query: 527  VEYFDNLPDPAKNHLTYGALLNCYCKNEKTEKAFDLFEKMSEKNITST-LAFNNLMTLHM 703
             EYF+NL   AKN LTYG LLNCYCK +  EKA  LFEKM E N  ST L FNNLM+LHM
Sbjct: 170  EEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKALALFEKMDELNFASTSLTFNNLMSLHM 229

Query: 704  KLGEPEKVPLLLQKMKEKSISPDTFTYNIVMASHAATKDIEGVERVLKEMETKDSERCDW 883
            +LG+PE VP L+ +MK++SISPDTFTYNI+M S+A   DIEG ERVL+E++ ++ ++  W
Sbjct: 230  RLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSYARLNDIEGAERVLEEIKRENEDKLSW 289

Query: 884  STYSNLASIYIKAGIIDKANLALIELEKKMMPSYRTAYHFLISFYASTSNLSEVHRVWSS 1063
            +TYSNLA++Y+ A + +KA LAL +LE++M    R AYHFLIS YA  +NLSEV+RVW+S
Sbjct: 290  TTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNS 349

Query: 1064 LKSALPTTNNLSYLVMLQSLSKLDDLDGLTKCFKDWETSCSSYDMRLANTVLSAYLRRDM 1243
            LKSA P TNN+SY +MLQ+L+ L+D+DGL  CF++W++SC S+D+RLAN  + A+L  DM
Sbjct: 350  LKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDM 409

Query: 1244 VNEARLICEDAIKRGPGLNYRTHELFMDFFIRNLQLDSALSCMEACMSIVXXXXXNEWKP 1423
            + +A  I  +A+KR  G  Y   ++FM   ++  ++D+AL  MEA  S V     NEW+P
Sbjct: 410  IKDAESILYEAVKRSSGPFYTALDMFMAHHLKVREIDTALKYMEAAASEV---KNNEWQP 466

Query: 1424 TPERVMAFLKHCVEQKNVTGAEEFCKMLKNV 1516
             PERV+AFLK+  E+K+V GAE+FCK+LKN+
Sbjct: 467  APERVLAFLKYFEEEKDVEGAEKFCKILKNI 497