BLASTX nr result

ID: Coptis21_contig00018476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018476
         (1606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24...   502   e-139
ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus comm...   487   e-135
emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]   474   e-131
ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|2...   470   e-130
ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|2...   469   e-129

>ref|XP_002275220.2| PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Vitis vinifera]
          Length = 466

 Score =  502 bits (1293), Expect = e-139
 Identities = 242/403 (60%), Positives = 311/403 (77%), Gaps = 3/403 (0%)
 Frame = +1

Query: 112  SMDDVEIPQYFICPISLQIMKDPVTIVTGITYDRESIEQWLSADPNTCCPVTKQPLPKDF 291
            SMDD+EIPQYF+CPISLQIMKDPVT +TGITYDRESIEQWL    +T CPVTKQPL +DF
Sbjct: 6    SMDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERDF 65

Query: 292  DLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQSKALRRLV 471
             LTPNHTLRRLIQAWC  NA NGVDRIPTPK+PL+  H++KL++DL   QL  K L+++ 
Sbjct: 66   VLTPNHTLRRLIQAWCADNATNGVDRIPTPKTPLDRTHVVKLIRDLGVAQLYLKTLQKME 125

Query: 472  SLAAENERNRKCMMEAGVAKAMVSMIIACSKKNVIDGVREALNVLSIISIPIAEINLFI- 648
            +L  +NERNR CM +AG AKA+V +II C K+N   GV E L +L +I  P +E+ L + 
Sbjct: 126  ALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTGVEEGLRILHLIWSPTSEMKLLLK 185

Query: 649  --YDFFDSIAWVLRCGKANHVELKTDALLVLKSVVELVCSSLLERLKPDFIAAILEVLRY 822
              YDF D++ W L C   N+V ++++A+LVLK++VE+   +LLERLK +F+  ++  +R 
Sbjct: 186  ENYDFVDAVTWALGCETDNYVAVRSNAVLVLKNIVEVASPNLLERLKFEFLNRLIRTMRE 245

Query: 823  NLSPQANKAALQVMLDACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELSFCILDHLC 1002
             +S  A KAAL V+++ CPWGRNK ++IEAGAVF LIE++L  P+K+ +E+ FC+L HLC
Sbjct: 246  KISQAAMKAALYVLMEVCPWGRNKWQMIEAGAVFQLIEMELENPEKKITEIIFCLLGHLC 305

Query: 1003 SCADGRANFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVLQEMLNVGAV 1182
            SCADGRA FLAH   +AM++K+I RVS  TDDRA+ I+A I KFS TNEVL EML VGAV
Sbjct: 306  SCADGRAQFLAHAGSMAMLSKRILRVSNTTDDRALHIIALISKFSGTNEVLMEMLRVGAV 365

Query: 1183 AKLCMVLQADTSANVKEKARDVLRLHNNIWGNSPCIQLYLLTR 1311
            +KLCMVLQAD +  +KEKAR++LRLH+ +W NSPCI +YLLTR
Sbjct: 366  SKLCMVLQADCAKYLKEKAREILRLHSKVWNNSPCIAVYLLTR 408


>ref|XP_002524055.1| Spotted leaf protein, putative [Ricinus communis]
            gi|223536623|gb|EEF38265.1| Spotted leaf protein,
            putative [Ricinus communis]
          Length = 403

 Score =  487 bits (1253), Expect = e-135
 Identities = 241/402 (59%), Positives = 306/402 (76%), Gaps = 4/402 (0%)
 Frame = +1

Query: 115  MDDVEIPQYFICPISLQIMKDPVTIVTGITYDRESIEQWLSADPNTCCPVTKQPLPKDFD 294
            MDD+EIPQYFICPISLQIMKDPVTI+TGITYDR+SIEQWL    NT CPVTKQ LPKDFD
Sbjct: 1    MDDIEIPQYFICPISLQIMKDPVTIITGITYDRDSIEQWLFTTKNTICPVTKQSLPKDFD 60

Query: 295  LTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQSKALRRLVS 474
            LTPNHTLRRLIQAWC+ NA++G+DRIPTPK  L+  H+LKL++DL  P+LQ K L +L  
Sbjct: 61   LTPNHTLRRLIQAWCIDNASSGIDRIPTPKPCLDKFHLLKLIKDLHLPRLQMKTLVQLEL 120

Query: 475  LAAENERNRKCMMEAGVAKAMVSMIIACSKKNVIDGVREALNVLSIISIPIAEINLFIYD 654
            LAAEN+RNRK M E GV KA++  I+ C KK   DG++EA+++L +I IP  E    + +
Sbjct: 121  LAAENDRNRKYMAETGVPKALLLFIVTCFKKGRFDGIQEAVSILRLIRIPPQESRALLSE 180

Query: 655  ---FFDSIAWVLR-CGKANHVELKTDALLVLKSVVELVCSSLLERLKPDFIAAILEVLRY 822
                 +S+ WVLR C   NH+ +K+ A+ VLK V E   SS+LERLKP+F   I+ V+R 
Sbjct: 181  NDQIIESLTWVLRWCSSDNHITIKSHAVSVLKMVSEDASSSVLERLKPEFFETIVGVIRE 240

Query: 823  NLSPQANKAALQVMLDACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELSFCILDHLC 1002
             ++ Q   AAL+V+  ACPWGRN++ +++AGAVF+LIEL+  +P+K+T+EL   IL HLC
Sbjct: 241  KITQQGINAALKVLSHACPWGRNRIMMVDAGAVFELIELEWRYPEKKTTELILGILFHLC 300

Query: 1003 SCADGRANFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVLQEMLNVGAV 1182
            SCADGRA FL+H  GIA+V K+I +VSP  DDRAV IL+ ICKFS T+ VLQEMLNV AV
Sbjct: 301  SCADGRAKFLSHRGGIAVVAKRILKVSPAADDRAVLILSLICKFSGTSMVLQEMLNVKAV 360

Query: 1183 AKLCMVLQADTSANVKEKARDVLRLHNNIWGNSPCIQLYLLT 1308
            +KLCM+LQAD +  +K+KAR++LRLH++ W NSPCI    LT
Sbjct: 361  SKLCMMLQADCAVYLKDKAREILRLHSDEWKNSPCIDASFLT 402


>emb|CAN80214.1| hypothetical protein VITISV_017908 [Vitis vinifera]
          Length = 437

 Score =  474 bits (1221), Expect = e-131
 Identities = 230/387 (59%), Positives = 298/387 (77%), Gaps = 3/387 (0%)
 Frame = +1

Query: 112  SMDDVEIPQYFICPISLQIMKDPVTIVTGITYDRESIEQWLSADPNTCCPVTKQPLPKDF 291
            SMDD+EIPQYF+CPISLQIMKDPVT +TGITYDRESIEQWL    +T CPVTKQPL +DF
Sbjct: 6    SMDDIEIPQYFLCPISLQIMKDPVTAMTGITYDRESIEQWLLTAKDTTCPVTKQPLERDF 65

Query: 292  DLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQSKALRRLV 471
             LTPNHTLRRLIQAWC  NA NGVD+IPTPK+PL+  H++KL++DL   QL  K L+++ 
Sbjct: 66   VLTPNHTLRRLIQAWCAANATNGVDQIPTPKTPLDRTHVVKLIRDLGVAQLYLKTLQKME 125

Query: 472  SLAAENERNRKCMMEAGVAKAMVSMIIACSKKNVIDGVREALNVLSIISIPIAEINLFI- 648
            +L  +NERNR CM +AG AKA+V +II C K+N   GV E L +L +I  P +E+ L + 
Sbjct: 126  ALTRDNERNRNCMADAGAAKAIVLLIIKCFKENKTTGVEEGLRILHLIWSPTSEMKLLLK 185

Query: 649  --YDFFDSIAWVLRCGKANHVELKTDALLVLKSVVELVCSSLLERLKPDFIAAILEVLRY 822
              YDF D++ W L C   N+V ++++A+LVLK++VE+   +LLERLK +F+  ++  +R 
Sbjct: 186  ENYDFVDAVTWALGCETDNYVAVRSNAVLVLKNIVEVASPNLLERLKFEFLNRLIRTMRE 245

Query: 823  NLSPQANKAALQVMLDACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELSFCILDHLC 1002
             +S  A KAAL V+++ CPWGRNK ++IEAGAVF LIE++L  P+K+ +E+ FC+L HLC
Sbjct: 246  KISQAAMKAALYVLMEVCPWGRNKWQMIEAGAVFQLIEMELENPEKKITEIIFCLLGHLC 305

Query: 1003 SCADGRANFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVLQEMLNVGAV 1182
            SCADGRA FLAH   +AM++K+I RVS  TDDRA+ I+A I KFS TNEVL EML VGAV
Sbjct: 306  SCADGRAQFLAHAGSMAMLSKRILRVSNTTDDRALHIIALISKFSGTNEVLMEMLRVGAV 365

Query: 1183 AKLCMVLQADTSANVKEKARDVLRLHN 1263
            +KLCMVLQAD +  +KEKAR++LRLH+
Sbjct: 366  SKLCMVLQADCAKYLKEKAREILRLHS 392


>ref|XP_002314258.1| predicted protein [Populus trichocarpa] gi|222850666|gb|EEE88213.1|
            predicted protein [Populus trichocarpa]
          Length = 410

 Score =  470 bits (1209), Expect = e-130
 Identities = 237/409 (57%), Positives = 303/409 (74%), Gaps = 8/409 (1%)
 Frame = +1

Query: 115  MDDVEIPQYFICPISLQIMKDPVTIVTGITYDRESIEQWL-SADPNTCCPVTKQPLPKDF 291
            MD++E+P+YF+CPISLQI+KDPVT +TGITY+RESIEQWL +A  N  CPVTKQ LP+D 
Sbjct: 1    MDEIEVPEYFLCPISLQILKDPVTTITGITYERESIEQWLKAAKSNPTCPVTKQSLPRDS 60

Query: 292  DLTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQ--LQSKALRR 465
            +LTPNHTLRRLIQ+WC  NA  GVDRIPTPKSP+    I +L++DL  P   L++KALRR
Sbjct: 61   ELTPNHTLRRLIQSWCTVNAIYGVDRIPTPKSPIKKSQIFRLIKDLDAPDDHLRTKALRR 120

Query: 466  LVSLAAENERNRKCMMEAGVAKAMVSMIIACSKKNVIDGVREALNVLSIISIPIAEINLF 645
            + +LA ENERNR CM+EAGV KA V  II C K+    G+ E L +L +I  P  EI L 
Sbjct: 121  MEALAKENERNRTCMVEAGVTKAAVLFIIKCFKEGKTAGLEEVLRILYLIWNPSQEIKLL 180

Query: 646  I---YDFFDSIAWVLRCGKAN-HVELKTDALLVLKSVVELVCSSLLERLKPDFIAAIL-E 810
            +    DF DS+ W+LRC + N HV++K+ A+L+L    E+VC  LLE LK DF   I+  
Sbjct: 181  VRENQDFIDSLTWILRCDQINNHVDVKSHAMLLLHKTTEIVCQKLLESLKVDFFKEIITR 240

Query: 811  VLRYNLSPQANKAALQVMLDACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELSFCIL 990
            VLR  +S QA K++L V+ + C WGRN++KI+EA AVF+LIEL+L  P+K  +EL F IL
Sbjct: 241  VLRKRISKQAVKSSLLVLTEVCHWGRNRMKIVEANAVFELIELELEKPEKNITELIFNIL 300

Query: 991  DHLCSCADGRANFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVLQEMLN 1170
              LCSCADGR  FL H   IAM++K++ RVSP TDDRA+ IL SI KFSA++E   EML 
Sbjct: 301  AQLCSCADGREQFLKHAGSIAMISKRVLRVSPATDDRALHILDSISKFSASDEAALEMLR 360

Query: 1171 VGAVAKLCMVLQADTSANVKEKARDVLRLHNNIWGNSPCIQLYLLTRFP 1317
            VGAV+KLCMV+QAD +  +K+KAR +LRLH+++W NSPCI +YLLTR+P
Sbjct: 361  VGAVSKLCMVIQADCAPYLKKKARGILRLHSHMWNNSPCIAVYLLTRYP 409


>ref|XP_002308324.1| predicted protein [Populus trichocarpa] gi|222854300|gb|EEE91847.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  469 bits (1206), Expect = e-129
 Identities = 230/396 (58%), Positives = 297/396 (75%), Gaps = 4/396 (1%)
 Frame = +1

Query: 115  MDDVEIPQYFICPISLQIMKDPVTIVTGITYDRESIEQWLSADPNTCCPVTKQPLPKDFD 294
            MDD+E+P++F+CPISLQIMKDPVT +TGITYDRESIE WL    NT CPVTKQPL KD D
Sbjct: 1    MDDIEVPKFFVCPISLQIMKDPVTTITGITYDRESIEHWLFTSQNTACPVTKQPLQKDLD 60

Query: 295  LTPNHTLRRLIQAWCVTNAANGVDRIPTPKSPLNNIHILKLLQDLWCPQLQSKALRRLVS 474
            LTPNHTLRRLIQAWC  NA++GVDRIPTPK  L+  H+LKL+++L   +LQ K L RL  
Sbjct: 61   LTPNHTLRRLIQAWCTENASHGVDRIPTPKPCLDKAHVLKLIKNLSHHELQIKTLTRLEL 120

Query: 475  LAAENERNRKCMMEAGVAKAMVSMIIACSKKNVIDGVREALNVLSIISIPIAEINLFIYD 654
            LAAENERNRKCM++AG+ KAM+  I AC KK  + G++EAL++L  I IP +E   F  +
Sbjct: 121  LAAENERNRKCMVDAGLPKAMLLFIAACFKKGQVSGIQEALSILCFIRIPRSESRAFYSE 180

Query: 655  ----FFDSIAWVLRCGKANHVELKTDALLVLKSVVELVCSSLLERLKPDFIAAILEVLRY 822
                  +S+ WVL C   N+  +K+ A  VLK ++E   SS+LERLKP+F   I+ VLR 
Sbjct: 181  NDDKIIESLTWVLGCKMENYATVKSHAASVLKMLLEEASSSVLERLKPEFFERIVGVLRE 240

Query: 823  NLSPQANKAALQVMLDACPWGRNKVKIIEAGAVFDLIELDLSWPDKRTSELSFCILDHLC 1002
             ++ Q   AALQV+L+ACPWGRN+  ++E+GAVF+LIEL+L  P++RT+EL+  +L HLC
Sbjct: 241  RITHQGINAALQVLLNACPWGRNRKMMVESGAVFELIELELGSPERRTTELNLGVLFHLC 300

Query: 1003 SCADGRANFLAHPAGIAMVTKKIFRVSPLTDDRAVRILASICKFSATNEVLQEMLNVGAV 1182
             CA+GRA FL+H   IA+V K+I RVSP  DDRA+ IL+ ICKFS T+ V+QEM +V AV
Sbjct: 301  CCAEGRAQFLSHGGSIAVVAKRILRVSPAVDDRAILILSQICKFSGTSMVIQEMADVKAV 360

Query: 1183 AKLCMVLQADTSANVKEKARDVLRLHNNIWGNSPCI 1290
             KLCM+LQAD +  +K+KAR++LR H++ W NSPCI
Sbjct: 361  TKLCMLLQADCATYLKDKAREILRSHSDKWKNSPCI 396


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