BLASTX nr result

ID: Coptis21_contig00018472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018472
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324967.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002324967.1| predicted protein [Populus trichocarpa] gi|222866401|gb|EEF03532.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/85 (41%), Positives = 43/85 (50%)
 Frame = -2

Query: 535 VVVASEAFN*TYNGNYFEVAEPVLKNIYIAPNNVGLQCEVKAKFFQVKSLFPFNANVFTL 356
           V V +E F  TYNG Y  V  P LKNI  A N  GL   VKA         PFNA+++  
Sbjct: 99  VAVGNEPFLQTYNGTYLHVTLPALKNIQHALNRAGLGSHVKA-------TVPFNADIYNS 151

Query: 355 PKSNQIHFNMQLVDFSPNIGDFTIK 281
           P SN +       DF P++ D TI+
Sbjct: 152 PGSNPV---PSAGDFRPDVRDLTIE 173


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