BLASTX nr result
ID: Coptis21_contig00018469
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00018469
(1865 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19849.3| unnamed protein product [Vitis vinifera] 312 2e-82
ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [V... 311 3e-82
ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|22355... 276 1e-71
ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [C... 269 2e-69
gb|AFB17947.1| E2F-like protein [Pinus sylvestris] 264 5e-68
>emb|CBI19849.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 312 bits (800), Expect = 2e-82
Identities = 187/367 (50%), Positives = 241/367 (65%), Gaps = 2/367 (0%)
Frame = +3
Query: 315 LQLKQTHSTTDNDSRAGQITMEAVKSENTFMEGKNGKHLKPSEWMNSLSRSNPRRTSKAK 494
L LKQT+ D GQ + +A ++G +G+ +K ++ SK+K
Sbjct: 72 LPLKQTNEI---DHCKGQTSRQAT------LDG-HGEEMKFPSLEPESCVGGKQQHSKSK 121
Query: 495 VSKHVKSEHQDITSKDGSGQPP--GGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVL 668
VSK+ KS Q ++ + P R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL
Sbjct: 122 VSKNAKSGAQRSNAESPNILNPVVTCRYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVL 181
Query: 669 KVQKRRIYDITNVLEGIELIEKTSKNHIRLKGLGLSRPLEVEGQVARLKAELQRLCDEEN 848
+VQKRRIYDITNVLEGI LIEKTSKNHI KG +S P +++ +V RLKAE++RL EE
Sbjct: 182 EVQKRRIYDITNVLEGIGLIEKTSKNHISWKGFDMSGPQKMDNEVTRLKAEVERLYAEEC 241
Query: 849 RLDEKIRLKQERLRALDVDASSQKFLFLTEEDITSVPCFQNKTLIAIKAPKASSIEVPDP 1028
RLD+ IR KQE LRA+ D + QK LFLTEEDIT++PCFQN+TLIAIKAP+ASS+EVPDP
Sbjct: 242 RLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQTLIAIKAPQASSVEVPDP 301
Query: 1029 DQDMDCSERQFEIIVRSTTGPIDLYLVRAKDINVKRIATGKSIENSVRGEAALFEKVQHS 1208
D+D+ S+RQF II+RSTTGPIDLYL+R K ++ S+E+S K+Q +
Sbjct: 302 DEDIGFSQRQFRIIIRSTTGPIDLYLLRTKSLDY-------SVEDSG------CNKLQDA 348
Query: 1209 GLLSEAREDQYNQTSPTMPHATGIQKIIPSEANIDDDYWFNTDRDVHISDLWANDDWDQV 1388
G S + +GIQKIIPS+ IDDDYW +D +V I+DLWAN+DW Q
Sbjct: 349 GPFSSLGSE-----------GSGIQKIIPSDFKIDDDYWLRSDPEVSITDLWANEDWAQE 397
Query: 1389 KEFIQVD 1409
+ Q D
Sbjct: 398 NDIFQED 404
>ref|XP_002280139.2| PREDICTED: transcription factor E2FC-like [Vitis vinifera]
Length = 437
Score = 311 bits (798), Expect = 3e-82
Identities = 187/367 (50%), Positives = 239/367 (65%), Gaps = 2/367 (0%)
Frame = +3
Query: 315 LQLKQTHSTTDNDSRAGQITMEAVKSENTFMEGKNGKHLKPSEWMNSLSRSNPRRTSKAK 494
L LKQT+ D GQ + +A ++G +G+ +K ++ SK+K
Sbjct: 72 LPLKQTNEI---DHCKGQTSRQAT------LDG-HGEEMKFPSLEPESCVGGKQQHSKSK 121
Query: 495 VSKHVKSEHQDITSKDGSGQPP--GGRIDSSLGLLTKKFITLMLEADDGILDLNKTAEVL 668
VSK+ KS Q ++ + P R DSSLGLLTKKFI+L+ EA DG LDLN+TA+VL
Sbjct: 122 VSKNAKSGAQRSNAESPNILNPVVTCRYDSSLGLLTKKFISLIQEAKDGTLDLNRTADVL 181
Query: 669 KVQKRRIYDITNVLEGIELIEKTSKNHIRLKGLGLSRPLEVEGQVARLKAELQRLCDEEN 848
+VQKRRIYDITNVLEGI LIEKTSKNHI KG +S P +++ +V RLKAE++RL EE
Sbjct: 182 EVQKRRIYDITNVLEGIGLIEKTSKNHISWKGFDMSGPQKMDNEVTRLKAEVERLYAEEC 241
Query: 849 RLDEKIRLKQERLRALDVDASSQKFLFLTEEDITSVPCFQNKTLIAIKAPKASSIEVPDP 1028
RLD+ IR KQE LRA+ D + QK LFLTEEDIT++PCFQN+TLIAIKAP+ASS+EVPDP
Sbjct: 242 RLDDCIREKQELLRAIAGDENCQKHLFLTEEDITTLPCFQNQTLIAIKAPQASSVEVPDP 301
Query: 1029 DQDMDCSERQFEIIVRSTTGPIDLYLVRAKDINVKRIATGKSIENSVRGEAALFEKVQHS 1208
D+D+ S+RQF II+RSTTGPIDLYL+R KS++ SV K+Q +
Sbjct: 302 DEDIGFSQRQFRIIIRSTTGPIDLYLLRRT----------KSLDYSVEDSGC--NKLQDA 349
Query: 1209 GLLSEAREDQYNQTSPTMPHATGIQKIIPSEANIDDDYWFNTDRDVHISDLWANDDWDQV 1388
G S + +GIQKIIPS+ IDDDYW +D +V I+DLWAN+DW Q
Sbjct: 350 GPFSSLGSE-----------GSGIQKIIPSDFKIDDDYWLRSDPEVSITDLWANEDWAQE 398
Query: 1389 KEFIQVD 1409
+ Q D
Sbjct: 399 NDIFQED 405
>ref|XP_002510521.1| E2F4,5, putative [Ricinus communis] gi|223551222|gb|EEF52708.1|
E2F4,5, putative [Ricinus communis]
Length = 386
Score = 276 bits (706), Expect = 1e-71
Identities = 153/300 (51%), Positives = 207/300 (69%), Gaps = 1/300 (0%)
Frame = +3
Query: 474 RRTSKAKVSKHVKSEHQDITSK-DGSGQPPGGRIDSSLGLLTKKFITLMLEADDGILDLN 650
+R S++KV K+V+S Q + +G G R DSSLGLLTKKF+ L+ EA DG LDLN
Sbjct: 107 KRNSRSKVPKNVRSGSQKSNADLNGLNPATGCRYDSSLGLLTKKFVKLIQEAKDGTLDLN 166
Query: 651 KTAEVLKVQKRRIYDITNVLEGIELIEKTSKNHIRLKGLGLSRPLEVEGQVARLKAELQR 830
+TA+VL+VQKRRIYDITNVLEGIELIEKTSKNHIR KG E+E V LK E++
Sbjct: 167 RTADVLEVQKRRIYDITNVLEGIELIEKTSKNHIRWKGYDDCGSKELEDHVTELKTEVES 226
Query: 831 LCDEENRLDEKIRLKQERLRALDVDASSQKFLFLTEEDITSVPCFQNKTLIAIKAPKASS 1010
L E++RLDE IR KQE LRAL+ D + +++LF+TEEDITS+ C+QN+TL+AIKAP+AS
Sbjct: 227 LHAEDHRLDESIREKQELLRALEEDENKKRYLFMTEEDITSLACYQNRTLLAIKAPQASY 286
Query: 1011 IEVPDPDQDMDCSERQFEIIVRSTTGPIDLYLVRAKDINVKRIATGKSIENSVRGEAALF 1190
+EVPDPD+D+ Q+++IVRSTTGPID+YL+ + + ++ G S+E+
Sbjct: 287 LEVPDPDEDI--GSPQYKMIVRSTTGPIDVYLLSPRRVELE----GLSLEHQ-------- 332
Query: 1191 EKVQHSGLLSEAREDQYNQTSPTMPHATGIQKIIPSEANIDDDYWFNTDRDVHISDLWAN 1370
Q+ E ++++S G+QKI PS+ +IDDDYWF +D +V IS+LW +
Sbjct: 333 ---QNQSKNPEVYSSMHSESS-------GVQKITPSDCDIDDDYWFRSDPEVSISELWGS 382
>ref|XP_004152759.1| PREDICTED: transcription factor E2FC-like [Cucumis sativus]
gi|449521766|ref|XP_004167900.1| PREDICTED: transcription
factor E2FC-like [Cucumis sativus]
Length = 410
Score = 269 bits (687), Expect = 2e-69
Identities = 151/308 (49%), Positives = 199/308 (64%), Gaps = 2/308 (0%)
Frame = +3
Query: 456 LSRSNPRRTSKAKVSKHVKSEHQDITSK--DGSGQPPGGRIDSSLGLLTKKFITLMLEAD 629
+S +N ++ K K+ K+ KS+ + + D Q GR DSSLG LTKKFI L+ EA+
Sbjct: 115 VSSANEKQNKKFKLQKNSKSKTRKSIDEPVDSPNQSTNGRYDSSLGFLTKKFIRLVQEAE 174
Query: 630 DGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKNHIRLKGLGLSRPLEVEGQVAR 809
DG LDLNKTA+VLKVQKRRIYDITNVLEGI LIEKT+ NHIR KG P E+ QV R
Sbjct: 175 DGTLDLNKTADVLKVQKRRIYDITNVLEGIGLIEKTTTNHIRWKGGERRGPQELNDQVGR 234
Query: 810 LKAELQRLCDEENRLDEKIRLKQERLRALDVDASSQKFLFLTEEDITSVPCFQNKTLIAI 989
LK E++ L +E RLDE IR+KQE LR L+ +A + LF+TEEDI +PCF+N+TLIA+
Sbjct: 235 LKDEVKSLYADERRLDELIRMKQELLRNLEQNAHYRNHLFITEEDILRIPCFKNQTLIAV 294
Query: 990 KAPKASSIEVPDPDQDMDCSERQFEIIVRSTTGPIDLYLVRAKDINVKRIATGKSIENSV 1169
KAP+AS IEVPDPD++ SERQ +I++STTGPIDLYL+R A + EN+
Sbjct: 295 KAPQASCIEVPDPDEEACFSERQCRMIIKSTTGPIDLYLLRT--------AKQELEENTS 346
Query: 1170 RGEAALFEKVQHSGLLSEAREDQYNQTSPTMPHATGIQKIIPSEANIDDDYWFNTDRDVH 1349
+ + ++ + + N T G+Q+I+P NIDDDYWF ++ V
Sbjct: 347 KQAKLCLAQQKNPNIFT-------NNTYSPFQDLHGMQRILPLHNNIDDDYWFQSNSQVS 399
Query: 1350 ISDLWAND 1373
I+ LW +
Sbjct: 400 ITHLWGEE 407
>gb|AFB17947.1| E2F-like protein [Pinus sylvestris]
Length = 380
Score = 264 bits (675), Expect = 5e-68
Identities = 159/343 (46%), Positives = 215/343 (62%), Gaps = 23/343 (6%)
Frame = +3
Query: 453 SLSRSNPRRTSKAKVSKHVKSEHQDITSKDGS--GQPP----GGRIDSSLGLLTKKFITL 614
++S + RR +++K++K K Q S GS G P R DSSLGLLTKKFI+L
Sbjct: 23 TVSGTGGRRYNRSKLAKRAKIGPQTPGSNIGSPLGNAPTPISSCRYDSSLGLLTKKFISL 82
Query: 615 MLEADDGILDLNKTAEVLKVQKRRIYDITNVLEGIELIEKTSKNHIRLKGLGLSRPLEVE 794
+ +ADDGILDLN A+ L+VQKRRIYDITNVLEGI LIEK KN I KGL +SRP EVE
Sbjct: 83 VKQADDGILDLNTAADTLEVQKRRIYDITNVLEGIGLIEKRLKNRICWKGLSVSRPGEVE 142
Query: 795 GQVARLKAELQRLCDEENRLDEKIRLKQERLRALDVDASSQKFLFLTEEDITSVPCFQNK 974
+ L+AE+ L EE +LD+ IR QERLR L D ++++L++T+EDI +PCFQN
Sbjct: 143 DEATVLQAEVDSLNLEECKLDDCIRDMQERLRILSEDDRNRRWLYVTDEDIKKLPCFQND 202
Query: 975 TLIAIKAPKASSIEVPDPDQDMDCSERQFEIIVRSTTGPIDLYLVRAKDINVKR------ 1136
TLIAIKAP +++EVPDPD+ ++ +R+++I++RST GPID+YLV + N++
Sbjct: 203 TLIAIKAPHGTTLEVPDPDEAVEYPQRRYQILLRSTMGPIDVYLVSQFEENIEEMNPVDL 262
Query: 1137 --------IATGKSIENSVRGEAALFEKVQHSGLLSEAREDQYNQTSPTMPHATGIQKII 1292
I + + S E A F +++ G E R+ TSP A GI +I+
Sbjct: 263 ATELVPSGICPAEGVTISSVQEGATFVEMECQG--HETRQPCTELTSP-QDTAGGIMRIV 319
Query: 1293 PSEANIDDDYWFNTDRDVHISDLW---ANDDWDQVKEFIQVDF 1412
PS+ANID DYW +D V I+D+W N WD+V E DF
Sbjct: 320 PSDANIDADYWLLSDSGVGITDMWRTETNSTWDEVIELSPTDF 362