BLASTX nr result

ID: Coptis21_contig00018453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018453
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34108.1| protein SEY1 [Cucumis melo subsp. melo]                238   5e-61
ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT...   233   2e-59
ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   233   2e-59
ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   233   2e-59
emb|CBI35950.3| unnamed protein product [Vitis vinifera]              232   3e-59

>gb|ADN34108.1| protein SEY1 [Cucumis melo subsp. melo]
          Length = 745

 Score =  238 bits (606), Expect = 5e-61
 Identities = 114/137 (83%), Positives = 124/137 (90%)
 Frame = -2

Query: 413 MGKGDDTCSIQLIDGDGTFNVSGLDNFSKTVKLGEWGLSYGVVSIMGPQSSGKSTLLNHL 234
           M K D++CS+QLIDGDG FNV G+DNF K VKLGE GLSY VVSIMGPQSSGKSTLLN+L
Sbjct: 1   MAKSDESCSVQLIDGDGGFNVDGIDNFIKDVKLGECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 233 FGTNFREMEACKRRNQTTKGIWMANCAGIESCTIVMDLEGTDGRERGEDDTVFEKRSALF 54
           FGTNFREM+A K R+QTTKGIW+A CAGIE CT+VMDLEGTDGRERGEDDT FEK+SALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 53  ALAVSDIVLINMWCHDI 3
           ALAVSDIVLINMWCHDI
Sbjct: 121 ALAVSDIVLINMWCHDI 137


>ref|XP_004155933.1| PREDICTED: LOW QUALITY PROTEIN: protein ROOT HAIR DEFECTIVE 3
           homolog 1-like [Cucumis sativus]
          Length = 818

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/137 (81%), Positives = 123/137 (89%)
 Frame = -2

Query: 413 MGKGDDTCSIQLIDGDGTFNVSGLDNFSKTVKLGEWGLSYGVVSIMGPQSSGKSTLLNHL 234
           M K D++CS+QLIDGDG FN  G+++F K VKLGE GLSY VVSIMGPQSSGKSTLLN+L
Sbjct: 1   MAKSDESCSVQLIDGDGGFNADGIESFIKDVKLGECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 233 FGTNFREMEACKRRNQTTKGIWMANCAGIESCTIVMDLEGTDGRERGEDDTVFEKRSALF 54
           FGTNFREM+A K R+QTTKGIW+A CAGIE CT+VMDLEGTDGRERGEDDT FEK+SALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 53  ALAVSDIVLINMWCHDI 3
           ALAVSDIVLINMWCHDI
Sbjct: 121 ALAVSDIVLINMWCHDI 137


>ref|XP_004141681.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Cucumis
           sativus]
          Length = 818

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/137 (81%), Positives = 123/137 (89%)
 Frame = -2

Query: 413 MGKGDDTCSIQLIDGDGTFNVSGLDNFSKTVKLGEWGLSYGVVSIMGPQSSGKSTLLNHL 234
           M K D++CS+QLIDGDG FN  G+++F K VKLGE GLSY VVSIMGPQSSGKSTLLN+L
Sbjct: 1   MAKSDESCSVQLIDGDGGFNADGIESFIKDVKLGECGLSYAVVSIMGPQSSGKSTLLNNL 60

Query: 233 FGTNFREMEACKRRNQTTKGIWMANCAGIESCTIVMDLEGTDGRERGEDDTVFEKRSALF 54
           FGTNFREM+A K R+QTTKGIW+A CAGIE CT+VMDLEGTDGRERGEDDT FEK+SALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWLARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 53  ALAVSDIVLINMWCHDI 3
           ALAVSDIVLINMWCHDI
Sbjct: 121 ALAVSDIVLINMWCHDI 137


>ref|XP_003529864.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 1-like [Glycine
           max]
          Length = 808

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/137 (82%), Positives = 120/137 (87%)
 Frame = -2

Query: 413 MGKGDDTCSIQLIDGDGTFNVSGLDNFSKTVKLGEWGLSYGVVSIMGPQSSGKSTLLNHL 234
           M   +  CS QLIDGDGTFNV G++NF K VKL E GLSY VVSIMGPQSSGKSTLLNHL
Sbjct: 1   MANSETCCSTQLIDGDGTFNVFGVENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 60

Query: 233 FGTNFREMEACKRRNQTTKGIWMANCAGIESCTIVMDLEGTDGRERGEDDTVFEKRSALF 54
           FGTNFREM+A K R+QTTKGIWMA CAGIE CT+VMDLEGTDGRERGEDDT FEK+SALF
Sbjct: 61  FGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 120

Query: 53  ALAVSDIVLINMWCHDI 3
           ALAVSDIVLINMWCHDI
Sbjct: 121 ALAVSDIVLINMWCHDI 137


>emb|CBI35950.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  232 bits (591), Expect = 3e-59
 Identities = 112/137 (81%), Positives = 120/137 (87%)
 Frame = -2

Query: 413 MGKGDDTCSIQLIDGDGTFNVSGLDNFSKTVKLGEWGLSYGVVSIMGPQSSGKSTLLNHL 234
           MG  D+ CS QLIDGDG FNV GL+NF K VKL E GLSY VVSIMGPQSSGKSTLLNHL
Sbjct: 217 MGNADECCSTQLIDGDGMFNVHGLENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNHL 276

Query: 233 FGTNFREMEACKRRNQTTKGIWMANCAGIESCTIVMDLEGTDGRERGEDDTVFEKRSALF 54
           FGTNFREM+A + R+QTTKGIW+A CA IE CT+VMDLEGTDGRERGEDDT FEK+SALF
Sbjct: 277 FGTNFREMDAFRGRSQTTKGIWLARCADIEPCTLVMDLEGTDGRERGEDDTAFEKQSALF 336

Query: 53  ALAVSDIVLINMWCHDI 3
           ALAVSDIVLINMWCHDI
Sbjct: 337 ALAVSDIVLINMWCHDI 353


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