BLASTX nr result

ID: Coptis21_contig00018443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018443
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21786.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-bindin...   385   e-104
ref|XP_002513417.1| GTP-binding protein, putative [Ricinus commu...   375   e-102
ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-bindin...   372   e-101
ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|2...   372   e-101

>emb|CBI21786.3| unnamed protein product [Vitis vinifera]
          Length = 370

 Score =  385 bits (988), Expect = e-104
 Identities = 194/222 (87%), Positives = 211/222 (95%)
 Frame = -2

Query: 926 KKGKGKDSPSKMKEEAEKSALERIRNALLDGKPARSVALTEFEKESVEHLCLLTMKPVIY 747
           KKGK KDS SK+KEEAEKSALERIR AL+DGKPARSV LT+FEK++++HLCLLTMKP+IY
Sbjct: 149 KKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPIIY 208

Query: 746 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLGV 567
           VANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSEER EFL SLGV
Sbjct: 209 VANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSEERTEFLKSLGV 268

Query: 566 TESGLGNLIRATYSLLGLRTYFTAGEKETKAWTILSGMTAPQAAGVIHSDFEKGFIRAET 387
           +ESGLGNLIRATYSLLGLRTYFT+GEKETKAWTIL+GMTAPQAAGVIHSDFEKGFIRAET
Sbjct: 269 SESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAET 328

Query: 386 VAYGDFVSCGSFADAREKGLLRSEGKDYIVQEGDVMLFRFNV 261
           VAY DFV+ GS A AREKGLLRSEGKDYIVQEGDVMLFRFNV
Sbjct: 329 VAYDDFVAAGSLAAAREKGLLRSEGKDYIVQEGDVMLFRFNV 370


>ref|XP_002269074.1| PREDICTED: GTP-dependent nucleic acid-binding protein engD-like
           [Vitis vinifera]
          Length = 422

 Score =  385 bits (988), Expect = e-104
 Identities = 194/222 (87%), Positives = 211/222 (95%)
 Frame = -2

Query: 926 KKGKGKDSPSKMKEEAEKSALERIRNALLDGKPARSVALTEFEKESVEHLCLLTMKPVIY 747
           KKGK KDS SK+KEEAEKSALERIR AL+DGKPARSV LT+FEK++++HLCLLTMKP+IY
Sbjct: 201 KKGKAKDSQSKLKEEAEKSALERIREALMDGKPARSVTLTDFEKDAIKHLCLLTMKPIIY 260

Query: 746 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLGV 567
           VANVAES+LAEP +NP+VKEVMNLA+ELQSG+VTISAQVESELTELPSEER EFL SLGV
Sbjct: 261 VANVAESDLAEPGSNPYVKEVMNLASELQSGIVTISAQVESELTELPSEERTEFLKSLGV 320

Query: 566 TESGLGNLIRATYSLLGLRTYFTAGEKETKAWTILSGMTAPQAAGVIHSDFEKGFIRAET 387
           +ESGLGNLIRATYSLLGLRTYFT+GEKETKAWTIL+GMTAPQAAGVIHSDFEKGFIRAET
Sbjct: 321 SESGLGNLIRATYSLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAET 380

Query: 386 VAYGDFVSCGSFADAREKGLLRSEGKDYIVQEGDVMLFRFNV 261
           VAY DFV+ GS A AREKGLLRSEGKDYIVQEGDVMLFRFNV
Sbjct: 381 VAYDDFVAAGSLAAAREKGLLRSEGKDYIVQEGDVMLFRFNV 422


>ref|XP_002513417.1| GTP-binding protein, putative [Ricinus communis]
           gi|223547325|gb|EEF48820.1| GTP-binding protein,
           putative [Ricinus communis]
          Length = 417

 Score =  375 bits (963), Expect = e-102
 Identities = 187/222 (84%), Positives = 209/222 (94%)
 Frame = -2

Query: 926 KKGKGKDSPSKMKEEAEKSALERIRNALLDGKPARSVALTEFEKESVEHLCLLTMKPVIY 747
           KKGK KDS SK+KEEAEKSALERI+ AL+DGKPARSVAL++FEK++++HLCLLTMKPVIY
Sbjct: 196 KKGKAKDSQSKLKEEAEKSALERIQGALMDGKPARSVALSDFEKDAIKHLCLLTMKPVIY 255

Query: 746 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLGV 567
           VANVAES+LA P NNPHVKEVMNLA++LQSGLV +SAQVESELTELP +ER E+L SLGV
Sbjct: 256 VANVAESDLAVPDNNPHVKEVMNLASDLQSGLVAVSAQVESELTELPVDERTEYLKSLGV 315

Query: 566 TESGLGNLIRATYSLLGLRTYFTAGEKETKAWTILSGMTAPQAAGVIHSDFEKGFIRAET 387
           +ESGLGNLIRATY+LLGLRTYFT+GEKETKAWTIL+GMTAPQAAGVIHSDFEKGFIRAET
Sbjct: 316 SESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFEKGFIRAET 375

Query: 386 VAYGDFVSCGSFADAREKGLLRSEGKDYIVQEGDVMLFRFNV 261
           VAY DFV+ GS A AREKG+LRSEGKDY+VQEGDVMLFRFNV
Sbjct: 376 VAYDDFVAAGSLAAAREKGVLRSEGKDYVVQEGDVMLFRFNV 417


>ref|XP_004144639.1| PREDICTED: GTP-dependent nucleic acid-binding protein EngD-like
           [Cucumis sativus] gi|449523505|ref|XP_004168764.1|
           PREDICTED: GTP-dependent nucleic acid-binding protein
           EngD-like [Cucumis sativus]
          Length = 421

 Score =  372 bits (956), Expect = e-101
 Identities = 186/222 (83%), Positives = 210/222 (94%)
 Frame = -2

Query: 926 KKGKGKDSPSKMKEEAEKSALERIRNALLDGKPARSVALTEFEKESVEHLCLLTMKPVIY 747
           KKGK KDS SK+KEEAEKSALE+I+  LLDGKPARSV LT+FEK++++HLCLLTMKPVIY
Sbjct: 200 KKGKAKDSQSKVKEEAEKSALEKIQKVLLDGKPARSVTLTDFEKDAIKHLCLLTMKPVIY 259

Query: 746 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLGV 567
           VANVAES+LAEP++N HVKEVM LA+ELQSG+VT+SAQVESEL+ELPSEER E+L SLGV
Sbjct: 260 VANVAESDLAEPASNLHVKEVMGLASELQSGIVTVSAQVESELSELPSEERFEYLKSLGV 319

Query: 566 TESGLGNLIRATYSLLGLRTYFTAGEKETKAWTILSGMTAPQAAGVIHSDFEKGFIRAET 387
           +ESGLGNLIRATY+LLGLRTYFT+GEKETKAWTIL+GMTAPQAAGVIHSDFE+GFIRAET
Sbjct: 320 SESGLGNLIRATYNLLGLRTYFTSGEKETKAWTILAGMTAPQAAGVIHSDFERGFIRAET 379

Query: 386 VAYGDFVSCGSFADAREKGLLRSEGKDYIVQEGDVMLFRFNV 261
           VAY DFV+ GSFA AREKGLLR+EGK+YIVQEGDVMLFRFNV
Sbjct: 380 VAYDDFVAAGSFAAAREKGLLRAEGKEYIVQEGDVMLFRFNV 421


>ref|XP_002299001.1| predicted protein [Populus trichocarpa] gi|222846259|gb|EEE83806.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score =  372 bits (956), Expect = e-101
 Identities = 191/222 (86%), Positives = 207/222 (93%)
 Frame = -2

Query: 926 KKGKGKDSPSKMKEEAEKSALERIRNALLDGKPARSVALTEFEKESVEHLCLLTMKPVIY 747
           KKGK +DS SK+KEEAEKSALERIR AL+DGKPARSVALT+FEK++V+HLCLLTMKPVIY
Sbjct: 149 KKGKARDSQSKLKEEAEKSALERIREALMDGKPARSVALTDFEKDAVKHLCLLTMKPVIY 208

Query: 746 VANVAESELAEPSNNPHVKEVMNLATELQSGLVTISAQVESELTELPSEERIEFLNSLGV 567
           VANVAESELA+  NNP+VKEVMNLA+ELQSGLVTISAQVESELTELP EER EFL SLGV
Sbjct: 209 VANVAESELADAGNNPYVKEVMNLASELQSGLVTISAQVESELTELPFEERNEFLKSLGV 268

Query: 566 TESGLGNLIRATYSLLGLRTYFTAGEKETKAWTILSGMTAPQAAGVIHSDFEKGFIRAET 387
           +ESGLGNLI ATY LLGLRTYFT+GEKE+KAWTI +GMTAPQAAGVIHSDFEKGFIRAET
Sbjct: 269 SESGLGNLITATYILLGLRTYFTSGEKESKAWTIHAGMTAPQAAGVIHSDFEKGFIRAET 328

Query: 386 VAYGDFVSCGSFADAREKGLLRSEGKDYIVQEGDVMLFRFNV 261
           V+Y DFV+ GS A AREKGLLRSEGKDYIVQEGDVMLFRFNV
Sbjct: 329 VSYDDFVAAGSLAAAREKGLLRSEGKDYIVQEGDVMLFRFNV 370


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