BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018439
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]              217   9e-55
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   217   9e-55
ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [S...   208   3e-52
ref|XP_003571216.1| PREDICTED: non-structural maintenance of chr...   204   5e-51

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  217 bits (552), Expect = 9e-55
 Identities = 108/163 (66%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   DIGRSAPKVFKKTLGFCTMVGPMNTELKERKVMARRKRTRLSDSSRPEELDSADVKS-SD 179
           DIG     +FK+  G CTM+GPMNTE+K+RK +   KR R ++S+RPEELD   V+  SD
Sbjct: 214 DIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPTESARPEELDDTVVEEKSD 273

Query: 180 TDKNMSTMFDILRKKKSVKLENLVLNRNSFAQTIENIFALSFLVKDGRVEINVDDKKHHL 359
           TDKNMS MFDILRK + V+LENL+LNRNSFAQT+EN+FALSFLVKDGR EI VD +  HL
Sbjct: 274 TDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDGRAEITVDGRGCHL 333

Query: 360 VSPKNAPSANEVTSKTVSYNHFVFRFDFQDWKLMKDSVEVGEE 488
           VSP+NAP+AN V S  V YNHFVFRFDF+DWKLM  SV  GEE
Sbjct: 334 VSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEE 376


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  217 bits (552), Expect = 9e-55
 Identities = 108/163 (66%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   DIGRSAPKVFKKTLGFCTMVGPMNTELKERKVMARRKRTRLSDSSRPEELDSADVKS-SD 179
           DIG     +FK+  G CTM+GPMNTE+K+RK +   KR R ++S+RPEELD   V+  SD
Sbjct: 142 DIGLVVSHIFKRASGCCTMLGPMNTEMKQRKPVVHNKRVRPTESARPEELDDTVVEEKSD 201

Query: 180 TDKNMSTMFDILRKKKSVKLENLVLNRNSFAQTIENIFALSFLVKDGRVEINVDDKKHHL 359
           TDKNMS MFDILRK + V+LENL+LNRNSFAQT+EN+FALSFLVKDGR EI VD +  HL
Sbjct: 202 TDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFLVKDGRAEITVDGRGCHL 261

Query: 360 VSPKNAPSANEVTSKTVSYNHFVFRFDFQDWKLMKDSVEVGEE 488
           VSP+NAP+AN V S  V YNHFVFRFDF+DWKLM  SV  GEE
Sbjct: 262 VSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEE 304


>ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  209 bits (532), Expect = 2e-52
 Identities = 104/163 (63%), Positives = 128/163 (78%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   DIGRSAPKVFKKTLGFCTMVGPMNTELKERKVMARRKRTRLSDSSRPEELDSADVKS-SD 179
           DIG +   +F    G CTMVGPM+TELK+RK +  R+RTR + S +PEE++ +  K  +D
Sbjct: 94  DIGVAVSHIFSSCPGCCTMVGPMDTELKQRKAVVGRRRTRPTGSVQPEEVNDSGAKERTD 153

Query: 180 TDKNMSTMFDILRKKKSVKLENLVLNRNSFAQTIENIFALSFLVKDGRVEINVDDKKHHL 359
           TDKNM+TMF IL+ K+SVKLENLVLNRNSFAQT+EN+FALSFLVKDGR EI V++   HL
Sbjct: 154 TDKNMATMFSILKNKRSVKLENLVLNRNSFAQTVENLFALSFLVKDGRAEIKVNENGWHL 213

Query: 360 VSPKNAPSANEVTSKTVSYNHFVFRFDFQDWKLMKDSVEVGEE 488
           VSP+NAP A +V S  V+Y HFVFRFDF+DWKLM  +VEVGEE
Sbjct: 214 VSPRNAPDAGKVVSGEVAYRHFVFRFDFKDWKLMISAVEVGEE 256


>ref|XP_002453471.1| hypothetical protein SORBIDRAFT_04g006460 [Sorghum bicolor]
           gi|241933302|gb|EES06447.1| hypothetical protein
           SORBIDRAFT_04g006460 [Sorghum bicolor]
          Length = 353

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/165 (61%), Positives = 134/165 (81%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   DIGRSAPKVFKKTLGFCTMVGPMNTELKERKVMA--RRKRTRLSDSSRPEEL-DSADVKS 173
           D+G S   +F+   G CTM+GPM+TE+K+RKV A  R++  R ++++ PEEL DS++   
Sbjct: 123 DLGLSVSHIFRPMPGCCTMLGPMDTEVKQRKVAAVGRKRTARPTENTCPEELADSSEEVK 182

Query: 174 SDTDKNMSTMFDILRKKKSVKLENLVLNRNSFAQTIENIFALSFLVKDGRVEINVDDKKH 353
           SDTD+N+  +FD+LR+KKS KLENLVLNR SFAQT+ENIFALSFLVKDGRVEIN+DD  H
Sbjct: 183 SDTDRNVLVIFDVLRRKKSAKLENLVLNRLSFAQTVENIFALSFLVKDGRVEINIDDNGH 242

Query: 354 HLVSPKNAPSANEVTSKTVSYNHFVFRFDFQDWKLMKDSVEVGEE 488
           H+V P+NAP+A+ + S  VSY+HFVFRFDF+DWKLMK++V+ GEE
Sbjct: 243 HIVRPRNAPAASAIASGEVSYSHFVFRFDFKDWKLMKEAVKEGEE 287


>ref|XP_003571216.1| PREDICTED: non-structural maintenance of chromosome element 4-like
           [Brachypodium distachyon]
          Length = 361

 Score =  204 bits (520), Expect = 5e-51
 Identities = 104/165 (63%), Positives = 136/165 (82%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   DIGRSAPKVFKKTLGFCTMVGPMNTELKERKV-MARRKRT-RLSDSSRPEEL-DSADVKS 173
           DIG SA  VF+   G  TM+GPM+TE+K+RKV +  RKRT + ++++RPEEL DS++   
Sbjct: 132 DIGFSASHVFQAVPGCRTMLGPMDTEVKQRKVSVVNRKRTAKPTENTRPEELADSSEGAK 191

Query: 174 SDTDKNMSTMFDILRKKKSVKLENLVLNRNSFAQTIENIFALSFLVKDGRVEINVDDKKH 353
           +DTD+N+S +FDILRKKKSV+LENLVLNR+SFAQT+EN+FALSFLVKDGRV IN+DD  H
Sbjct: 192 TDTDRNVSVVFDILRKKKSVRLENLVLNRHSFAQTVENVFALSFLVKDGRVAINIDDNGH 251

Query: 354 HLVSPKNAPSANEVTSKTVSYNHFVFRFDFQDWKLMKDSVEVGEE 488
           H+V P+NAP+A+ + S  VSY+HFVFRFD++DWKLM++ V  GEE
Sbjct: 252 HIVYPRNAPAASAIASGEVSYSHFVFRFDYRDWKLMREVVADGEE 296