BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00018435
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...    72   4e-11
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    72   4e-11
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               70   2e-10
gb|ABB46674.1| F-box domain containing protein, expressed [Oryza...    69   5e-10
gb|ABB46675.1| F-box domain containing protein, expressed [Oryza...    69   5e-10

>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = -3

Query: 441 STDWLISIPLELLHHILSFIDMKELIQMSVLSKNWRYMWKSLPTINISQEFWKGDEYEYP 262
           S D + S+P ++  HILSF+  KE    SVLSK WRY++  +P +++    +   E E  
Sbjct: 6   SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETE 65

Query: 261 -GSAFQYFVDKVLVGRDSSDIYKFSLIVCEDFEEEEFPPIMFDAYINVVRISNVQ--EIH 91
             ++F  FVD+VL  + +S ++KFSL + +  +     P+    +IN V    V   ++H
Sbjct: 66  ISTSFMDFVDRVLALQGNSPLHKFSLKIGDGID-----PVRIIPWINNVLERGVSDLDLH 120

Query: 90  LDAIPEIFVPTLISLAEQVKVLKL 19
           L+   E  +P+ + L + +  LKL
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKL 144


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = -3

Query: 441 STDWLISIPLELLHHILSFIDMKELIQMSVLSKNWRYMWKSLPTINISQEFWKGDEYEYP 262
           S D + S+P ++  HILSF+  KE    SVLSK WRY++  +P +++    +   E E  
Sbjct: 6   SRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETE 65

Query: 261 -GSAFQYFVDKVLVGRDSSDIYKFSLIVCEDFEEEEFPPIMFDAYINVVRISNVQ--EIH 91
             ++F  FVD+VL  + +S ++KFSL + +  +     P+    +IN V    V   ++H
Sbjct: 66  ISTSFMDFVDRVLALQGNSPLHKFSLKIGDGID-----PVRIIPWINNVLERGVSDLDLH 120

Query: 90  LDAIPEIFVPTLISLAEQVKVLKL 19
           L+   E  +P+ + L + +  LKL
Sbjct: 121 LNLESEFLLPSQVYLCKTLVWLKL 144


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 8/141 (5%)
 Frame = -3

Query: 444 ESTDWLISIPLELLHHILSFIDMKELIQMSVLSKNWRYMWKSLPTINISQEFWKGD---- 277
           ES D + ++P ELL HILSF+  K  +  S+LSK WRY+W S+P ++   E W       
Sbjct: 7   ESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLV 66

Query: 276 EYEYPGSAFQYFVDKVLVGRDSSDIYKFSLIVCEDFEEE---EFPPIMFDA-YINVVRIS 109
           E E     FQ FVD VL   + S I KF L   ++  +    E PP+ F    + VV++S
Sbjct: 67  ELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDNWGVELPPMFFICKTLVVVKLS 126

Query: 108 NVQEIHLDAIPEIFVPTLISL 46
               + LD    +++P+L +L
Sbjct: 127 CA--LFLDIPTTVWLPSLKAL 145


>gb|ABB46674.1| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 424

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = -3

Query: 435 DWLISIPLELLHHILSFIDMKELIQMSVLSKNWRYMWKSLPTINISQE-----FWKGDEY 271
           DWL  +P E+LHHI+SF+D ++ ++  VLS+ WR +W+++P IN   +     F++GD+ 
Sbjct: 16  DWLGDLPEEVLHHIMSFLDARQAVRTCVLSRRWRNLWRTVPCINADFDEFDLVFYQGDDE 75

Query: 270 EYPG-SAFQYFVDKVLVGRD 214
           +Y    AF+ FV+++L  RD
Sbjct: 76  DYDDVLAFKRFVNRLLELRD 95


>gb|ABB46675.1| F-box domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 331

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/80 (40%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = -3

Query: 435 DWLISIPLELLHHILSFIDMKELIQMSVLSKNWRYMWKSLPTINISQE-----FWKGDEY 271
           DWL  +P E+LHHI+SF+D ++ ++  VLS+ WR +W+++P IN   +     F++GD+ 
Sbjct: 16  DWLGDLPEEVLHHIMSFLDARQAVRTCVLSRRWRNLWRTVPCINADFDEFDLVFYQGDDE 75

Query: 270 EYPG-SAFQYFVDKVLVGRD 214
           +Y    AF+ FV+++L  RD
Sbjct: 76  DYDDVLAFKRFVNRLLELRD 95